RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 GLIPR1L1Q6UWM5 242 aa12.43□□□□□ -0.42
LMO4-201ENST00000370542 C1QL2Q7Z5L3 287 aa12.43□□□□□ -0.42
LMO4-201ENST00000370542 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.43□□□□□ -0.42
LMO4-201ENST00000370542 OR10G4Q8NGN3 311 aa12.43□□□□□ -0.42
LMO4-201ENST00000370542 OR5R1Q8NH85 324 aa12.43□□□□□ -0.42
LMO4-201ENST00000370542 CD300LFQ8TDQ1 290 aa12.43□□□□□ -0.42
LMO4-201ENST00000370542 TIMD4Q96H15 378 aa12.43□□□□□ -0.42
LMO4-201ENST00000370542 POLR3KQ9Y2Y1 108 aaPredicted RBP12.43□□□□□ -0.42
LMO4-201ENST00000370542 CRYM-AS1A6NIL9 109 aa12.42□□□□□ -0.42
LMO4-201ENST00000370542 J3QW42 95 aa12.42□□□□□ -0.42
LMO4-201ENST00000370542 SPRY3O43610 288 aa12.42□□□□□ -0.42
LMO4-201ENST00000370542 MPIG6BO95866 241 aa12.42□□□□□ -0.42
LMO4-201ENST00000370542 TTRP02766 147 aa12.42□□□□□ -0.42
LMO4-201ENST00000370542 CCL1P22362 96 aa12.42□□□□□ -0.42
LMO4-201ENST00000370542 RPS10P46783 165 aaKnown RBP12.42□□□□□ -0.42
LMO4-201ENST00000370542 LSM6P62312 80 aaKnown RBP12.42□□□□□ -0.42
LMO4-201ENST00000370542 SRPXP78539 464 aa12.42□□□□□ -0.42
LMO4-201ENST00000370542 SPRNQ5BIV9 151 aa12.42□□□□□ -0.42
LMO4-201ENST00000370542 AADACL3Q5VUY0 350 aa12.42□□□□□ -0.42
LMO4-201ENST00000370542 DOK3Q7L591 496 aa12.42□□□□□ -0.42
LMO4-201ENST00000370542 SLC35E3Q7Z769 313 aa12.42□□□□□ -0.42
LMO4-201ENST00000370542 ZNF418Q8TF45 676 aaPredicted RBP12.42□□□□□ -0.42
LMO4-201ENST00000370542 CCL17Q92583 94 aa12.42□□□□□ -0.42
LMO4-201ENST00000370542 PPP1R14AQ96A00 147 aa12.42□□□□□ -0.42
LMO4-201ENST00000370542 CMBLQ96DG6 245 aa12.42□□□□□ -0.42
LMO4-201ENST00000370542 PPP1R14DQ9NXH3 145 aa12.42□□□□□ -0.42
LMO4-201ENST00000370542 EHFQ9NZC4 300 aa12.42□□□□□ -0.42
LMO4-201ENST00000370542 OR6C6A6NF89 314 aa12.41□□□□□ -0.42
LMO4-201ENST00000370542 SLC31A2O15432 143 aa12.41□□□□□ -0.42
LMO4-201ENST00000370542 HSPA12AO43301 675 aa12.41□□□□□ -0.42
LMO4-201ENST00000370542 MBPP02686 304 aaPredicted RBP12.41□□□□□ -0.42
LMO4-201ENST00000370542 HSPB1P04792 205 aaKnown RBP12.41□□□□□ -0.42
LMO4-201ENST00000370542 SNU13P55769 128 aaKnown RBP12.41□□□□□ -0.42
LMO4-201ENST00000370542 OR2B8PP59922 312 aa12.41□□□□□ -0.42
LMO4-201ENST00000370542 KCNMB1Q16558 191 aa12.41□□□□□ -0.42
LMO4-201ENST00000370542 Q6ZR03 302 aa12.41□□□□□ -0.42
LMO4-201ENST00000370542 ZNF283Q8N7M2 679 aa12.41□□□□□ -0.42
LMO4-201ENST00000370542 ZNF383Q8NA42 475 aa12.41□□□□□ -0.42
LMO4-201ENST00000370542 FAM216AQ8WUB2 273 aa12.41□□□□□ -0.42
LMO4-201ENST00000370542 SLAMF9Q96A28 289 aa12.41□□□□□ -0.42
LMO4-201ENST00000370542 C10orf35Q96D05 121 aa12.41□□□□□ -0.42
LMO4-201ENST00000370542 SLAMF6Q96DU3 332 aa12.41□□□□□ -0.42
LMO4-201ENST00000370542 RBMXL1Q96E39 390 aaKnown RBP12.41□□□□□ -0.42
LMO4-201ENST00000370542 NOL4LQ96MY1 436 aaPredicted RBP12.41□□□□□ -0.42
LMO4-201ENST00000370542 C2orf88Q9BSF0 95 aa12.41□□□□□ -0.42
LMO4-201ENST00000370542 TM2D1Q9BX74 207 aa12.41□□□□□ -0.42
LMO4-201ENST00000370542 MSL2Q9HCI7 577 aa12.41□□□□□ -0.42
LMO4-201ENST00000370542 TMEM242Q9NWH2 141 aa12.41□□□□□ -0.42
LMO4-201ENST00000370542 KIAA1456Q9P272 454 aa12.41□□□□□ -0.42
LMO4-201ENST00000370542 DYSFO75923 2080 aa12.41□□□□□ -0.42
LMO4-201ENST00000370542 LOC105371242A0A075B767 164 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 FAM230AA0A1W2PPH8 454 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 TMEM89A2RUT3 159 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 K7N7A8 449 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 EPHA1P21709 976 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 DUSP1P28562 367 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 CEACAM6P40199 344 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 NDUFA6P56556 154 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 HIST1H3AP68431 136 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 PNRC1Q12796 327 aaPredicted RBP12.4□□□□□ -0.42
LMO4-201ENST00000370542 HNF4GQ14541 408 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 PYY3Q5JQD4 70 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 GGNBP1Q5YKI7 109 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 FAM219AQ8IW50 185 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 OR13C9Q8NGT0 318 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 RAB24Q969Q5 203 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 TVP23CQ96ET8 276 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 ADAT3Q96EY9 351 aaPredicted RBP12.4□□□□□ -0.42
LMO4-201ENST00000370542 CENPMQ9NSP4 180 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 DOK5Q9P104 306 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 IL19Q9UHD0 177 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 TRRAPQ9Y4A5 3859 aa12.4□□□□□ -0.42
LMO4-201ENST00000370542 A0A1W2PPE2 198 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 RBFOX3A6NFN3 312 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 ZNF878C9JN71 531 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 ST8SIA3O43173 380 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 MMP9P14780 707 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 GLRA1P23415 457 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 ZFP36P26651 326 aaKnown RBP12.39□□□□□ -0.43
LMO4-201ENST00000370542 SPCS3P61009 180 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 UBE2KP61086 200 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 GNMTQ14749 295 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 UBE2V2Q15819 145 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 ZNF674Q2M3X9 581 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 SLC22A6Q4U2R8 563 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 TMEM155Q4W5P6 130 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 PLAC9Q5JTB6 97 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 LGI3Q8N145 548 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 CCDC71LQ8N9Z2 235 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 OR2AJ1Q8NGZ0 328 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 ISOC2Q96AB3 205 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 GNPNAT1Q96EK6 184 aaPredicted RBP12.39□□□□□ -0.43
LMO4-201ENST00000370542 RSRP1Q9BUV0 290 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 SLC25A31Q9H0C2 315 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 TMEM106BQ9NUM4 274 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 DCAF16Q9NXF7 216 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 PLA2G2EQ9NZK7 142 aa12.39□□□□□ -0.43
LMO4-201ENST00000370542 LSM5Q9Y4Y9 91 aaKnown RBP12.39□□□□□ -0.43
LMO4-201ENST00000370542 TRBV23-1A0A0A0MS06 115 aa12.38□□□□□ -0.43
LMO4-201ENST00000370542 A0A1B0GWJ7 208 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms