RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 MOSP00540 346 aa11.85□□□□□ -0.51
COL9A1-204ENST00000370496 RCVRNP35243 200 aa11.85□□□□□ -0.51
COL9A1-204ENST00000370496 LUMP51884 338 aaPredicted RBP11.85□□□□□ -0.51
COL9A1-204ENST00000370496 CDK10Q15131 360 aa11.85□□□□□ -0.51
COL9A1-204ENST00000370496 FAM131AQ6UXB0 335 aa11.85□□□□□ -0.51
COL9A1-204ENST00000370496 GLDNQ6ZMI3 551 aaPredicted RBP11.85□□□□□ -0.51
COL9A1-204ENST00000370496 OR5AP2Q8NGF4 316 aa11.85□□□□□ -0.51
COL9A1-204ENST00000370496 OR5H2Q8NGV7 314 aa11.85□□□□□ -0.51
COL9A1-204ENST00000370496 LINC01006Q8NI28 216 aa11.85□□□□□ -0.51
COL9A1-204ENST00000370496 GPX8Q8TED1 209 aa11.85□□□□□ -0.51
COL9A1-204ENST00000370496 ZNF251Q9BRH9 671 aa11.85□□□□□ -0.51
COL9A1-204ENST00000370496 C16orf95Q9H693 158 aa11.85□□□□□ -0.51
COL9A1-204ENST00000370496 ZNF702PQ9H963 129 aa11.85□□□□□ -0.51
COL9A1-204ENST00000370496 EHFQ9NZC4 300 aa11.85□□□□□ -0.51
COL9A1-204ENST00000370496 NDUFA13Q9P0J0 144 aa11.85□□□□□ -0.51
COL9A1-204ENST00000370496 RNF114Q9Y508 228 aa11.85□□□□□ -0.51
COL9A1-204ENST00000370496 MMP24Q9Y5R2 645 aa11.85□□□□□ -0.51
COL9A1-204ENST00000370496 NCBP2LA6PVI3 153 aaKnown RBP11.84□□□□□ -0.51
COL9A1-204ENST00000370496 H7C2Y5 167 aa11.84□□□□□ -0.51
COL9A1-204ENST00000370496 APOA2P02652 100 aa11.84□□□□□ -0.51
COL9A1-204ENST00000370496 OR5H8P0DN80 308 aa11.84□□□□□ -0.51
COL9A1-204ENST00000370496 IL18Q14116 193 aa11.84□□□□□ -0.51
COL9A1-204ENST00000370496 ABCA11PQ4W5N1 156 aa11.84□□□□□ -0.51
COL9A1-204ENST00000370496 C9orf152Q5JTZ5 239 aa11.84□□□□□ -0.51
COL9A1-204ENST00000370496 DRAXINQ8NBI3 349 aaPredicted RBP11.84□□□□□ -0.51
COL9A1-204ENST00000370496 SDHAF2Q9NX18 166 aa11.84□□□□□ -0.51
COL9A1-204ENST00000370496 SIGLEC9Q9Y336 463 aa11.84□□□□□ -0.51
COL9A1-204ENST00000370496 PEX14O75381 377 aa11.83□□□□□ -0.52
COL9A1-204ENST00000370496 TPPPO94811 219 aa11.83□□□□□ -0.52
COL9A1-204ENST00000370496 CT45A6P0DMU7 189 aa11.83□□□□□ -0.52
COL9A1-204ENST00000370496 CT45A5P0DMU8 189 aa11.83□□□□□ -0.52
COL9A1-204ENST00000370496 CT45A7P0DMV0 189 aa11.83□□□□□ -0.52
COL9A1-204ENST00000370496 FCGR2CP31995 323 aa11.83□□□□□ -0.52
COL9A1-204ENST00000370496 S100A5P33763 92 aa11.83□□□□□ -0.52
COL9A1-204ENST00000370496 ACTBP60709 375 aa11.83□□□□□ -0.52
COL9A1-204ENST00000370496 HERV-K104P61576 105 aa11.83□□□□□ -0.52
COL9A1-204ENST00000370496 BLCAPP62952 87 aa11.83□□□□□ -0.52
COL9A1-204ENST00000370496 EBI3Q14213 229 aa11.83□□□□□ -0.52
COL9A1-204ENST00000370496 MMDQ15546 238 aa11.83□□□□□ -0.52
COL9A1-204ENST00000370496 Q8N6K4 173 aa11.83□□□□□ -0.52
COL9A1-204ENST00000370496 ZNF645Q8N7E2 425 aa11.83□□□□□ -0.52
COL9A1-204ENST00000370496 NXF2Q9GZY0 626 aaKnown RBP11.83□□□□□ -0.52
COL9A1-204ENST00000370496 WASHC3Q9Y3C0 194 aa11.83□□□□□ -0.52
COL9A1-204ENST00000370496 IGKV1D-13A0A0B4J2D9 117 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 DPPA5A6NC42 116 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 SH2D7A6NKC9 451 aaPredicted RBP11.82□□□□□ -0.52
COL9A1-204ENST00000370496 H0YJW9 148 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 FGF16O43320 207 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 TUSC2O75896 110 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 PPYP01298 95 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 PMP2P02689 132 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 IGKV1-13P0DP09 117 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 NAT1P18440 290 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 AADACP22760 399 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 HLA-DMAP28067 261 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 MC5RP33032 325 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 HRH1P35367 487 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 VDAC2P45880 294 aaPredicted RBP11.82□□□□□ -0.52
COL9A1-204ENST00000370496 FXYD4P59646 89 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 MRPS10P82664 201 aaKnown RBP11.82□□□□□ -0.52
COL9A1-204ENST00000370496 CBX3Q13185 183 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 PYHIN1Q6K0P9 492 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 C11orf88Q6PI97 169 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 C5orf56Q8N8D9 126 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 OR8H1Q8NGG4 311 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 OR52I2Q8NH67 350 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 SECTM1Q8WVN6 248 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 FCAMRQ8WWV6 532 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 WFDC12Q8WWY7 111 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 RBMXL1Q96E39 390 aaKnown RBP11.82□□□□□ -0.52
COL9A1-204ENST00000370496 MMP27Q9H306 513 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 RABL2AQ9UBK7 228 aaPredicted RBP11.82□□□□□ -0.52
COL9A1-204ENST00000370496 RABL2BQ9UNT1 228 aa11.82□□□□□ -0.52
COL9A1-204ENST00000370496 STAB1Q9NY15 2570 aa11.81□□□□□ -0.52
COL9A1-204ENST00000370496 SLC22A5O76082 557 aa11.81□□□□□ -0.52
COL9A1-204ENST00000370496 THBS3P49746 956 aa11.81□□□□□ -0.52
COL9A1-204ENST00000370496 TMEM95Q3KNT9 176 aa11.81□□□□□ -0.52
COL9A1-204ENST00000370496 ACTBL2Q562R1 376 aa11.81□□□□□ -0.52
COL9A1-204ENST00000370496 TMEM17Q86X19 198 aa11.81□□□□□ -0.52
COL9A1-204ENST00000370496 Q8N2B8 174 aa11.81□□□□□ -0.52
COL9A1-204ENST00000370496 C5orf30Q96GV9 206 aa11.81□□□□□ -0.52
COL9A1-204ENST00000370496 ABHD1Q96SE0 405 aa11.81□□□□□ -0.52
COL9A1-204ENST00000370496 KIAA1456Q9P272 454 aa11.81□□□□□ -0.52
COL9A1-204ENST00000370496 GABARAPH6UMI1 98 aa11.8□□□□□ -0.52
COL9A1-204ENST00000370496 RBBP9O75884 186 aa11.8□□□□□ -0.52
COL9A1-204ENST00000370496 AMY1AP04745 511 aa11.8□□□□□ -0.52
COL9A1-204ENST00000370496 AMY2AP04746 511 aa11.8□□□□□ -0.52
COL9A1-204ENST00000370496 TNFSF8P32971 234 aa11.8□□□□□ -0.52
COL9A1-204ENST00000370496 RFX2P48378 723 aa11.8□□□□□ -0.52
COL9A1-204ENST00000370496 PROK1P58294 105 aa11.8□□□□□ -0.52
COL9A1-204ENST00000370496 DGCR2P98153 550 aa11.8□□□□□ -0.52
COL9A1-204ENST00000370496 DYRK1AQ13627 763 aa11.8□□□□□ -0.52
COL9A1-204ENST00000370496 Q6ZS46 218 aa11.8□□□□□ -0.52
COL9A1-204ENST00000370496 OVCH2Q7RTZ1 564 aa11.8□□□□□ -0.52
COL9A1-204ENST00000370496 PDPNQ86YL7 162 aa11.8□□□□□ -0.52
COL9A1-204ENST00000370496 KLHDC1Q8N7A1 406 aa11.8□□□□□ -0.52
COL9A1-204ENST00000370496 ZNF383Q8NA42 475 aa11.8□□□□□ -0.52
COL9A1-204ENST00000370496 OR5AN1Q8NGI8 311 aa11.8□□□□□ -0.52
COL9A1-204ENST00000370496 DGCR14Q96DF8 476 aaKnown RBP11.8□□□□□ -0.52
COL9A1-204ENST00000370496 ADTRPQ96IZ2 230 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms