RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 A8MXE2 369 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 FCN1O00602 326 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 DEGS1O15121 323 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 PPBPP02775 128 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 CDC34P49427 236 aaPredicted RBP13.69□□□□□ -0.22
CHD1L-203ENST00000369259 UBE2G2P60604 165 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 Q6ZVH6 145 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 KLHDC1Q8N7A1 406 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 MTIF3Q9H2K0 278 aaKnown RBP13.69□□□□□ -0.22
CHD1L-203ENST00000369259 NRN1Q9NPD7 142 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 IL23AQ9NPF7 189 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 TBL2Q9Y4P3 447 aaKnown RBP13.69□□□□□ -0.22
CHD1L-203ENST00000369259 ARHGAP21Q5T5U3 1957 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 EXPH5Q8NEV8 1989 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 IGHV3-15A0A0B4J1V0 119 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 A0A1B0GX78 115 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 ZNF253O75346 499 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 FGF12P61328 243 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 TFF3Q07654 80 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 TMEM92Q6UXU6 159 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 RDH5Q92781 318 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 HS3ST6Q96QI5 342 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 NPCDR1Q9BY65 106 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 BET1LQ9NYM9 111 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 IL36BQ9NZH7 164 aa13.69□□□□□ -0.22
CHD1L-203ENST00000369259 IGHV2OR16-5A0A0B4J2B6 119 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 IGHV2-70DA0A0C4DH43 119 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 FAM166BA8MTA8 275 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 DEFA4P12838 97 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 BMP5P22003 454 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 HINT1P49773 126 aaPredicted RBP13.68□□□□□ -0.22
CHD1L-203ENST00000369259 OR1D5P58170 312 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 PSG4Q00888 419 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 NOGQ13253 232 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 ZNF585BQ52M93 769 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 FBLN7Q53RD9 439 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 FAM69BQ5VUD6 431 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 MCEMP1Q8IX19 187 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 KLHDC7BQ96G42 594 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 SGCZQ96LD1 299 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 MRPS16Q9Y3D3 137 aaKnown RBP13.68□□□□□ -0.22
CHD1L-203ENST00000369259 MED12Q93074 2177 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 TRBV20OR9-2A0A075B6H5 130 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 TRAV34A0A0B4J273 112 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 OR4C5Q8NGB2 326 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 GNB4Q9HAV0 340 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 HSPB7Q9UBY9 170 aa13.68□□□□□ -0.22
CHD1L-203ENST00000369259 TSPOP30536 169 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 RAC1P63000 192 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 KRTAP27-1Q3LI81 207 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 KRTCAP3Q53RY4 240 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 KIAA0895LQ68EN5 471 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 C20orf204Q6ZNR8 217 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 TCTEX1D1Q8N7M0 179 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 SPOCK3Q9BQ16 436 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 QTRT1Q9BXR0 403 aaKnown RBP13.67□□□□□ -0.22
CHD1L-203ENST00000369259 PPP1R3CQ9UQK1 317 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 DOCK11Q5JSL3 2073 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 VAMP5O95183 116 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 IGLV2-14P01704 120 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 ZNF16P17020 682 aaPredicted RBP13.67□□□□□ -0.22
CHD1L-203ENST00000369259 IER3P46695 156 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 THBS3P49746 956 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 HLA-DRB5Q30154 266 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 SMIM15Q7Z3B0 74 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 ANKRD37Q7Z713 158 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 CADM4Q8NFZ8 388 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 OR1L1Q8NH94 360 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 APOBEC3DQ96AK3 386 aaPredicted RBP13.67□□□□□ -0.22
CHD1L-203ENST00000369259 CCDC74BQ96LY2 380 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 SLC35D1Q9NTN3 355 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 IL36RNQ9UBH0 155 aa13.67□□□□□ -0.22
CHD1L-203ENST00000369259 SNURFLB1AK76 121 aa13.66□□□□□ -0.22
CHD1L-203ENST00000369259 C17orf112F2Z3M2 114 aa13.66□□□□□ -0.22
CHD1L-203ENST00000369259 CCL5P13501 91 aa13.66□□□□□ -0.22
CHD1L-203ENST00000369259 ZNF32P17041 273 aa13.66□□□□□ -0.22
CHD1L-203ENST00000369259 AMTP48728 403 aa13.66□□□□□ -0.22
CHD1L-203ENST00000369259 TRIP6Q15654 476 aaKnown RBP13.66□□□□□ -0.22
CHD1L-203ENST00000369259 TMEM249Q2WGJ8 235 aa13.66□□□□□ -0.22
CHD1L-203ENST00000369259 OR10P1Q8NGE3 313 aa13.66□□□□□ -0.22
CHD1L-203ENST00000369259 OCC1Q8TAD7 63 aa13.66□□□□□ -0.22
CHD1L-203ENST00000369259 UCN2Q96RP3 112 aa13.66□□□□□ -0.22
CHD1L-203ENST00000369259 LIN7CQ9NUP9 197 aaKnown RBP13.66□□□□□ -0.22
CHD1L-203ENST00000369259 PCDH15Q96QU1 1955 aa13.66□□□□□ -0.22
CHD1L-203ENST00000369259 SAA2-SAA4A0A096LPE2 208 aa13.66□□□□□ -0.22
CHD1L-203ENST00000369259 PMS2P5A8MQ11 134 aa13.66□□□□□ -0.22
CHD1L-203ENST00000369259 C5orf67F2Z3F1 127 aa13.66□□□□□ -0.22
CHD1L-203ENST00000369259 PATE4P0C8F1 98 aa13.66□□□□□ -0.22
CHD1L-203ENST00000369259 LGALS4P56470 323 aa13.66□□□□□ -0.22
CHD1L-203ENST00000369259 FAM122AQ96E09 287 aa13.66□□□□□ -0.22
CHD1L-203ENST00000369259 TRBV6-6A0A0A6YYG2 114 aa13.65□□□□□ -0.22
CHD1L-203ENST00000369259 TRBV9A0A0B4J1U6 114 aa13.65□□□□□ -0.22
CHD1L-203ENST00000369259 C10orf142B7Z368 130 aa13.65□□□□□ -0.22
CHD1L-203ENST00000369259 KMT5CQ86Y97 462 aa13.65□□□□□ -0.22
CHD1L-203ENST00000369259 GCNT2Q8N0V5 402 aa13.65□□□□□ -0.22
CHD1L-203ENST00000369259 FGFRL1Q8N441 504 aa13.65□□□□□ -0.22
CHD1L-203ENST00000369259 ZIC4Q8N9L1 334 aa13.65□□□□□ -0.22
CHD1L-203ENST00000369259 KCNS1Q96KK3 526 aa13.65□□□□□ -0.22
CHD1L-203ENST00000369259 DPRXA6NFQ7 191 aa13.65□□□□□ -0.22
CHD1L-203ENST00000369259 SLC17A3O00476 420 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms