RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 CTDSP1Q9GZU7 261 aa8.56□□□□□ -1.04
TPM3-209ENST00000368527 RBKSQ9H477 322 aa8.56□□□□□ -1.04
TPM3-209ENST00000368527 SAV1Q9H4B6 383 aaPredicted RBP8.56□□□□□ -1.04
TPM3-209ENST00000368527 MANBALQ9NQG1 85 aa8.56□□□□□ -1.04
TPM3-209ENST00000368527 VAX2Q9UIW0 290 aa8.56□□□□□ -1.04
TPM3-209ENST00000368527 CACNA1GO43497 2377 aa8.56□□□□□ -1.04
TPM3-209ENST00000368527 ZNF407Q9C0G0 2248 aa8.56□□□□□ -1.04
TPM3-209ENST00000368527 GPR179Q6PRD1 2367 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 IGLV3-9A0A075B6K5 115 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 ODAMA1E959 279 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 H3BQ15 152 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 C15orf65H3BRN8 121 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 GPR37O15354 613 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 ZNHIT1O43257 154 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 ZNF737O75373 536 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 OR2C1O95371 312 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 OR13C7P0DN81 318 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 IAPPP10997 89 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 GPR12P47775 334 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 ASCL1P50553 236 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 ATP5IP56385 69 aaPredicted RBP8.55□□□□□ -1.04
TPM3-209ENST00000368527 ERVK-16P61578 105 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 VWC2Q2TAL6 325 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 TMEM249Q2WGJ8 235 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 PDLIM3Q53GG5 364 aaPredicted RBP8.55□□□□□ -1.04
TPM3-209ENST00000368527 SPANXN5Q5MJ07 72 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 Q6ZR03 302 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 C5orf24Q7Z6I8 188 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 OR52L2PQ8NGH6 319 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 MRGPRDQ8TDS7 321 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 DTD1Q8TEA8 209 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 S100PBPQ96BU1 408 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 GPHA2Q96T91 129 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 FAM234AQ9H0X4 552 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 RPRMQ9NS64 109 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 KNTC1P50748 2209 aa8.55□□□□□ -1.04
TPM3-209ENST00000368527 DNAJC13O75165 2243 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 MED13Q9UHV7 2174 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 CTXND1A0A1B0GTU2 59 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 TMEM250H0YL14 139 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 H3BP45 60 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 TM4SF5O14894 197 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 WNT9BO14905 357 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 KRASP01116 189 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 S100A9P06702 114 aaKnown RBP8.54□□□□□ -1.04
TPM3-209ENST00000368527 SPCS3P61009 180 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 NKX6-1P78426 367 aaPredicted RBP8.54□□□□□ -1.04
TPM3-209ENST00000368527 RUNX1Q01196 453 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 FOXF2Q12947 444 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 HAGHQ16775 308 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 PRAMEF6Q5VXH4 476 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 ZNF826PQ6ZT77 177 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 OR2Z1Q8NG97 314 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 OR13D1Q8NGV5 346 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 FAM222BQ8WU58 562 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 MEGF10Q96KG7 1140 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 OR4C12Q96R67 309 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 TXNDC17Q9BRA2 123 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 AGMATQ9BSE5 352 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 ACTR3CQ9C0K3 210 aaPredicted RBP8.54□□□□□ -1.04
TPM3-209ENST00000368527 OPN3Q9H1Y3 402 aaPredicted RBP8.54□□□□□ -1.04
TPM3-209ENST00000368527 SLC39A9Q9NUM3 307 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 GNG12Q9UBI6 72 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 METTL1Q9UBP6 276 aaKnown RBP8.54□□□□□ -1.04
TPM3-209ENST00000368527 IL19Q9UHD0 177 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 PUS1Q9Y606 427 aaKnown RBP eCLIP8.54□□□□□ -1.04
TPM3-209ENST00000368527 CACNA1HO95180 2353 aa8.54□□□□□ -1.04
TPM3-209ENST00000368527 TRAV39A0A0B4J263 110 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 SMCO3A2RU48 225 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 MAP1LC3B2A6NCE7 125 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 MARCH11A6NNE9 402 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 CEBPZOSA8MTT3 80 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 VSTM5A8MXK1 200 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 CYB5BO43169 146 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 S1PR2O95136 353 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 LHBP01229 141 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 CEACAM8P31997 349 aaPredicted RBP8.53□□□□□ -1.04
TPM3-209ENST00000368527 GLIPR1P48060 266 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 PSMB3P49720 205 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 CCL20P78556 96 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 HABP2Q14520 560 aaPredicted RBP8.53□□□□□ -1.04
TPM3-209ENST00000368527 AKIRIN2Q53H80 203 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 CD177Q8N6Q3 437 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 NUP37Q8NFH4 326 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 OR10A7Q8NGE5 316 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 OR13A1Q8NGR1 328 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 Q8TCH9 128 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 R3HDM4Q96D70 268 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 RAB39BQ96DA2 213 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 SDSLQ96GA7 329 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 RCC1LQ96I51 464 aaKnown RBP8.53□□□□□ -1.04
TPM3-209ENST00000368527 RARRES2Q99969 163 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 MAP1LC3BQ9GZQ8 125 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 MSL2Q9HCI7 577 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 UFSP2Q9NUQ7 469 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 ELOVL5Q9NYP7 299 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 GNG13Q9P2W3 67 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 RNF7Q9UBF6 113 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 PCNX2A6NKB5 2137 aa8.53□□□□□ -1.04
TPM3-209ENST00000368527 MED12LQ86YW9 2145 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms