RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 C1QTNF12Q5T7M4 302 aa10.41□□□□□ -0.74
CDC42BPA-203ENST00000366766 TMEM252Q8N6L7 170 aa10.41□□□□□ -0.74
CDC42BPA-203ENST00000366766 TM2D1Q9BX74 207 aa10.41□□□□□ -0.74
CDC42BPA-203ENST00000366766 OR5AL1P0C617 328 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 KCNMB1Q16558 191 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 HIST3H3Q16695 136 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 BLNKQ8WV28 456 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 SNRNP40Q96DI7 357 aaKnown RBP10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 SLC25A33Q9BSK2 321 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 VENTXO95231 258 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 HBZP02008 142 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 KHDC1LQ5JSQ8 128 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 ZNF441Q8N8Z8 693 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 PDCD1Q15116 288 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 OR2J1Q9GZK6 312 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 ARG1P05089 322 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 Q6ZN92 141 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 SGMS2Q8NHU3 365 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 TREM2Q9NZC2 230 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 APCSP02743 223 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 P2RY4P51582 365 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 ALKBH6Q3KRA9 238 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 ZNF714Q96N38 554 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 SCNM1Q9BWG6 230 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 IGKV1D-42A0A075B6H8 117 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 HYAL3O43820 417 aaPredicted RBP10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 MMD2Q8IY49 270 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 OR8I2Q8N0Y5 310 aa10.4□□□□□ -0.74
CDC42BPA-203ENST00000366766 RFLNBQ8N5W9 214 aa10.4□□□□□ -0.75
CDC42BPA-203ENST00000366766 GTF3AQ92664 365 aaKnown RBP10.4□□□□□ -0.75
CDC42BPA-203ENST00000366766 MRPS18CQ9Y3D5 142 aaKnown RBP10.4□□□□□ -0.75
CDC42BPA-203ENST00000366766 NEURL1O76050 574 aa10.4□□□□□ -0.75
CDC42BPA-203ENST00000366766 TMEM131Q92545 1883 aa10.4□□□□□ -0.75
CDC42BPA-203ENST00000366766 F2RL2O00254 374 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 MPV17P39210 176 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 H2BFSP57053 126 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 RPL8P62917 257 aaKnown RBP10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 SAP25Q8TEE9 199 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 OR4X1Q8NH49 305 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 HYPMO75409 117 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 LINC00114Q6XXX2 140 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 KCNE5Q9UJ90 142 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 TICRRQ7Z2Z1 1910 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 PSMG4Q5JS54 123 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 PLSCR2Q9NRY7 297 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 IGHV3-43A0A0B4J1X8 118 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 IGHV3-43DP0DP04 118 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 RND3P61587 244 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 WDFY1Q8IWB7 410 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 COL25A1Q9BXS0 654 aaPredicted RBP10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 PMCHL1Q16048 86 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 G6PCP35575 357 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 SPEM2Q0P670 501 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 RHOVQ96L33 236 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 FAM90A1Q86YD7 464 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 C1orf162Q8NEQ5 155 aaPredicted RBP10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 ATG101Q9BSB4 218 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 MRPL32Q9BYC8 188 aaKnown RBP10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 HIGD1AQ9Y241 93 aa10.39□□□□□ -0.75
CDC42BPA-203ENST00000366766 ZNF716A6NP11 495 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 PAGE4O60829 102 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 RPS20P60866 119 aaKnown RBP10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 RNF151Q2KHN1 245 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 CYB5R2Q6BCY4 276 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 STPG3Q8N7X2 389 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 OR4B1Q8NGF8 309 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 SSMEM1Q8WWF3 244 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 TAF15Q92804 592 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 TNFRSF9Q07011 255 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 TMEM54Q969K7 222 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 NRTNQ99748 197 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 PAXXQ9BUH6 204 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 MARCH11A6NNE9 402 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 C5orf17Q8NAS9 161 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 WASHC3Q9Y3C0 194 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 AESQ08117 197 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 CLEC12BQ2HXU8 276 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 ZXDCQ2QGD7 858 aaPredicted RBP10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 SLC25A45Q8N413 288 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 OR1K1Q8NGR3 316 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 PILRBQ9UKJ0 227 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 ODAMA1E959 279 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 MPZP25189 248 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 DEFB124Q8NES8 71 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 RPL29P47914 159 aaKnown RBP10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 CAMPP49913 170 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 METTL1Q9UBP6 276 aaKnown RBP10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 ZMAT5Q9UDW3 170 aaKnown RBP10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 JPT1Q9UK76 154 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 STARD4Q96DR4 205 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 ALPK3Q96L96 1907 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 PIN1P1O15428 100 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 FUT9Q9Y231 359 aa10.38□□□□□ -0.75
CDC42BPA-203ENST00000366766 IGKV3D-11A0A0A0MRZ8 115 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 C1orf185Q5T7R7 199 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 POC1AQ8NBT0 407 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 PXMP4Q9Y6I8 212 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 COX6A1P12074 109 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 CA7P43166 264 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms