RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 AKR1C4P17516 323 aa16.81■□□□□ 0.28
SHISA4-201ENST00000362011 UBE2MP61081 183 aaKnown RBP16.81■□□□□ 0.28
SHISA4-201ENST00000362011 KLRD1Q13241 179 aa16.81■□□□□ 0.28
SHISA4-201ENST00000362011 LYG1Q8N1E2 194 aa16.81■□□□□ 0.28
SHISA4-201ENST00000362011 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.81■□□□□ 0.28
SHISA4-201ENST00000362011 TMEM230Q96A57 120 aa16.81■□□□□ 0.28
SHISA4-201ENST00000362011 MSI2Q96DH6 328 aaKnown RBP16.81■□□□□ 0.28
SHISA4-201ENST00000362011 TBX15Q96SF7 602 aa16.81■□□□□ 0.28
SHISA4-201ENST00000362011 HIF1ANQ9NWT6 349 aa16.81■□□□□ 0.28
SHISA4-201ENST00000362011 GAB2Q9UQC2 676 aa16.81■□□□□ 0.28
SHISA4-201ENST00000362011 MXRA5Q9NR99 2828 aa16.8■□□□□ 0.28
SHISA4-201ENST00000362011 RAB29O14966 203 aa16.8■□□□□ 0.28
SHISA4-201ENST00000362011 IGLV2-14P01704 120 aa16.8■□□□□ 0.28
SHISA4-201ENST00000362011 IL5P05113 134 aa16.8■□□□□ 0.28
SHISA4-201ENST00000362011 OR4E1P0C645 316 aa16.8■□□□□ 0.28
SHISA4-201ENST00000362011 PRB3Q04118 309 aaPredicted RBP16.8■□□□□ 0.28
SHISA4-201ENST00000362011 TMEM128Q5BJH2 165 aa16.8■□□□□ 0.28
SHISA4-201ENST00000362011 FAHD2BQ6P2I3 314 aaPredicted RBP16.8■□□□□ 0.28
SHISA4-201ENST00000362011 BEND2Q8NDZ0 799 aa16.8■□□□□ 0.28
SHISA4-201ENST00000362011 OR10X1Q8NGY0 326 aa16.8■□□□□ 0.28
SHISA4-201ENST00000362011 CAPSLQ8WWF8 208 aa16.8■□□□□ 0.28
SHISA4-201ENST00000362011 FAHD2AQ96GK7 314 aa16.8■□□□□ 0.28
SHISA4-201ENST00000362011 SDHAF2Q9NX18 166 aa16.8■□□□□ 0.28
SHISA4-201ENST00000362011 ZNRD1Q9P1U0 126 aa16.8■□□□□ 0.28
SHISA4-201ENST00000362011 AMMECR1Q9Y4X0 333 aaPredicted RBP16.8■□□□□ 0.28
SHISA4-201ENST00000362011 CRYM-AS1A6NIL9 109 aa16.79■□□□□ 0.28
SHISA4-201ENST00000362011 IGLV1-47P01700 117 aa16.79■□□□□ 0.28
SHISA4-201ENST00000362011 IL3RAP26951 378 aa16.79■□□□□ 0.28
SHISA4-201ENST00000362011 DHODHQ02127 395 aa16.79■□□□□ 0.28
SHISA4-201ENST00000362011 TATDN3Q17R31 274 aa16.79■□□□□ 0.28
SHISA4-201ENST00000362011 HLA-DRB5Q30154 266 aa16.79■□□□□ 0.28
SHISA4-201ENST00000362011 C4orf46Q504U0 113 aa16.79■□□□□ 0.28
SHISA4-201ENST00000362011 HCP5Q6MZN7 132 aa16.79■□□□□ 0.28
SHISA4-201ENST00000362011 C11orf88Q6PI97 169 aa16.79■□□□□ 0.28
SHISA4-201ENST00000362011 GLDNQ6ZMI3 551 aaPredicted RBP16.79■□□□□ 0.28
SHISA4-201ENST00000362011 ODF3L1Q8IXM7 274 aa16.79■□□□□ 0.28
SHISA4-201ENST00000362011 OR11H6Q8NGC7 330 aa16.79■□□□□ 0.28
SHISA4-201ENST00000362011 RTN4IP1Q8WWV3 396 aaPredicted RBP16.79■□□□□ 0.28
SHISA4-201ENST00000362011 C5orf30Q96GV9 206 aa16.79■□□□□ 0.28
SHISA4-201ENST00000362011 GPN1Q9HCN4 374 aaPredicted RBP16.79■□□□□ 0.28
SHISA4-201ENST00000362011 AUP1Q9Y679 476 aa16.79■□□□□ 0.28
SHISA4-201ENST00000362011 SAA2-SAA4A0A096LPE2 208 aa16.78■□□□□ 0.28
SHISA4-201ENST00000362011 TEX13DA0A0J9YY54 714 aaPredicted RBP16.78■□□□□ 0.28
SHISA4-201ENST00000362011 RNASEK-C17orf49H0YIS7 233 aa16.78■□□□□ 0.28
SHISA4-201ENST00000362011 TNFSF12O43508 249 aa16.78■□□□□ 0.28
SHISA4-201ENST00000362011 TGFAP01135 160 aa16.78■□□□□ 0.28
SHISA4-201ENST00000362011 ARG1P05089 322 aa16.78■□□□□ 0.28
SHISA4-201ENST00000362011 SAA2P0DJI9 122 aaPredicted RBP16.78■□□□□ 0.28
SHISA4-201ENST00000362011 PPP1R1AQ13522 171 aa16.78■□□□□ 0.28
SHISA4-201ENST00000362011 ZNF626Q68DY1 528 aa16.78■□□□□ 0.28
SHISA4-201ENST00000362011 CYB5R2Q6BCY4 276 aa16.78■□□□□ 0.28
SHISA4-201ENST00000362011 TBC1D26Q86UD7 250 aa16.78■□□□□ 0.28
SHISA4-201ENST00000362011 SGPP2Q8IWX5 399 aa16.78■□□□□ 0.28
SHISA4-201ENST00000362011 LHX4Q969G2 390 aa16.78■□□□□ 0.28
SHISA4-201ENST00000362011 S1PR3Q99500 378 aa16.78■□□□□ 0.28
SHISA4-201ENST00000362011 SEC22CQ9BRL7 303 aa16.78■□□□□ 0.28
SHISA4-201ENST00000362011 CUBNO60494 3623 aa16.78■□□□□ 0.28
SHISA4-201ENST00000362011 A0A0B4J293 547 aa16.77■□□□□ 0.28
SHISA4-201ENST00000362011 J3QLI3 93 aa16.77■□□□□ 0.28
SHISA4-201ENST00000362011 MPPED1O15442 326 aa16.77■□□□□ 0.28
SHISA4-201ENST00000362011 PGLYRP1O75594 196 aaPredicted RBP16.77■□□□□ 0.28
SHISA4-201ENST00000362011 ZNF16P17020 682 aaPredicted RBP16.77■□□□□ 0.28
SHISA4-201ENST00000362011 RPL39P5Q59GN2 51 aa16.77■□□□□ 0.28
SHISA4-201ENST00000362011 LYG2Q86SG7 212 aa16.77■□□□□ 0.28
SHISA4-201ENST00000362011 C7orf69Q9H7B7 122 aa16.77■□□□□ 0.28
SHISA4-201ENST00000362011 NAA60Q9H7X0 242 aa16.77■□□□□ 0.28
SHISA4-201ENST00000362011 ALG5Q9Y673 324 aa16.77■□□□□ 0.28
SHISA4-201ENST00000362011 SONP18583 2426 aaKnown RBP16.77■□□□□ 0.27
SHISA4-201ENST00000362011 C7orf66A4D0T2 115 aa16.76■□□□□ 0.27
SHISA4-201ENST00000362011 RNF212BA8MTL3 300 aa16.76■□□□□ 0.27
SHISA4-201ENST00000362011 ODF3BA8MYP8 253 aa16.76■□□□□ 0.27
SHISA4-201ENST00000362011 M0R1X1 148 aa16.76■□□□□ 0.27
SHISA4-201ENST00000362011 HLA-AP01891 365 aaKnown RBP16.76■□□□□ 0.27
SHISA4-201ENST00000362011 VAMP1P23763 118 aa16.76■□□□□ 0.27
SHISA4-201ENST00000362011 ZNF137PP52743 207 aa16.76■□□□□ 0.27
SHISA4-201ENST00000362011 CATR1Q13166 79 aa16.76■□□□□ 0.27
SHISA4-201ENST00000362011 EIF4EBP1Q13541 118 aaPredicted RBP16.76■□□□□ 0.27
SHISA4-201ENST00000362011 FAM71F2Q6NXP2 309 aa16.76■□□□□ 0.27
SHISA4-201ENST00000362011 ZNF66Q6ZN08 573 aa16.76■□□□□ 0.27
SHISA4-201ENST00000362011 OR52B4Q8NGK2 314 aa16.76■□□□□ 0.27
SHISA4-201ENST00000362011 GPHA2Q96T91 129 aa16.76■□□□□ 0.27
SHISA4-201ENST00000362011 HSD17B10Q99714 261 aaKnown RBP16.76■□□□□ 0.27
SHISA4-201ENST00000362011 KCNIP3Q9Y2W7 256 aa16.76■□□□□ 0.27
SHISA4-201ENST00000362011 C9orf170A2RU37 121 aa16.75■□□□□ 0.27
SHISA4-201ENST00000362011 BUB1B-PAK6H3BSN5 160 aa16.75■□□□□ 0.27
SHISA4-201ENST00000362011 SFT2D2O95562 160 aa16.75■□□□□ 0.27
SHISA4-201ENST00000362011 UBE2E1P51965 193 aa16.75■□□□□ 0.27
SHISA4-201ENST00000362011 SUPT4H1P63272 117 aaKnown RBP16.75■□□□□ 0.27
SHISA4-201ENST00000362011 CBX3Q13185 183 aa16.75■□□□□ 0.27
SHISA4-201ENST00000362011 DHRS2Q13268 280 aa16.75■□□□□ 0.27
SHISA4-201ENST00000362011 ZNF833PQ6ZTB9 187 aa16.75■□□□□ 0.27
SHISA4-201ENST00000362011 KCTD9Q7L273 389 aa16.75■□□□□ 0.27
SHISA4-201ENST00000362011 OR4P4Q8NGL7 312 aa16.75■□□□□ 0.27
SHISA4-201ENST00000362011 ZNF431Q8TF32 576 aaPredicted RBP16.75■□□□□ 0.27
SHISA4-201ENST00000362011 ZNF251Q9BRH9 671 aa16.75■□□□□ 0.27
SHISA4-201ENST00000362011 hCG_2014768A0A024R1R8 64 aa16.74■□□□□ 0.27
SHISA4-201ENST00000362011 A0A0A6YYJ9 748 aa16.74■□□□□ 0.27
SHISA4-201ENST00000362011 C3orf85A0A1B0GTC6 90 aa16.74■□□□□ 0.27
SHISA4-201ENST00000362011 A0A1B0GVG6 124 aa16.74■□□□□ 0.27
SHISA4-201ENST00000362011 SNRPGP15A8MWD9 76 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms