RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 TRAV1-1A0A0B4J248 108 aa18.92■□□□□ 0.62
LDB1-201ENST00000361198 OOEPA6NGQ2 149 aa18.92■□□□□ 0.62
LDB1-201ENST00000361198 H3BQ15 152 aa18.92■□□□□ 0.62
LDB1-201ENST00000361198 RPL23AP62750 156 aaKnown RBP18.92■□□□□ 0.62
LDB1-201ENST00000361198 ICAM4Q14773 271 aa18.92■□□□□ 0.62
LDB1-201ENST00000361198 Q6ZRM9 215 aa18.92■□□□□ 0.62
LDB1-201ENST00000361198 SEBOXQ9HB31 216 aaPredicted RBP18.92■□□□□ 0.62
LDB1-201ENST00000361198 USF3Q68DE3 2245 aa18.92■□□□□ 0.62
LDB1-201ENST00000361198 CEP295Q9C0D2 2601 aa18.92■□□□□ 0.62
LDB1-201ENST00000361198 IFNL4K9M1U5 179 aa18.91■□□□□ 0.62
LDB1-201ENST00000361198 SCAF4O95104 1147 aaKnown RBP18.91■□□□□ 0.62
LDB1-201ENST00000361198 OR2C1O95371 312 aa18.91■□□□□ 0.62
LDB1-201ENST00000361198 HBZP02008 142 aa18.91■□□□□ 0.62
LDB1-201ENST00000361198 HBE1P02100 147 aa18.91■□□□□ 0.62
LDB1-201ENST00000361198 ZNF16P17020 682 aaPredicted RBP18.91■□□□□ 0.62
LDB1-201ENST00000361198 IL2RGP31785 369 aa18.91■□□□□ 0.62
LDB1-201ENST00000361198 GLIPR1P48060 266 aa18.91■□□□□ 0.62
LDB1-201ENST00000361198 ZNF585BQ52M93 769 aa18.91■□□□□ 0.62
LDB1-201ENST00000361198 HEPN1Q6WQI6 88 aa18.91■□□□□ 0.62
LDB1-201ENST00000361198 C22orf34Q6ZV56 151 aa18.91■□□□□ 0.62
LDB1-201ENST00000361198 OR52L2PQ8NGH6 319 aa18.91■□□□□ 0.62
LDB1-201ENST00000361198 MRGPRDQ8TDS7 321 aa18.91■□□□□ 0.62
LDB1-201ENST00000361198 EGR1P18146 543 aa18.91■□□□□ 0.62
LDB1-201ENST00000361198 MZT1Q08AG7 82 aa18.91■□□□□ 0.62
LDB1-201ENST00000361198 FAM27E3Q08E93 113 aa18.91■□□□□ 0.62
LDB1-201ENST00000361198 HAGHQ16775 308 aa18.91■□□□□ 0.62
LDB1-201ENST00000361198 VHLLQ6RSH7 139 aa18.91■□□□□ 0.62
LDB1-201ENST00000361198 CD177Q8N6Q3 437 aa18.91■□□□□ 0.62
LDB1-201ENST00000361198 CLDND2Q8NHS1 167 aa18.91■□□□□ 0.62
LDB1-201ENST00000361198 A0A087WWC5 75 aa18.9■□□□□ 0.62
LDB1-201ENST00000361198 IGHV3-13P01766 116 aa18.9■□□□□ 0.62
LDB1-201ENST00000361198 BMP5P22003 454 aa18.9■□□□□ 0.62
LDB1-201ENST00000361198 GLRXP35754 106 aa18.9■□□□□ 0.62
LDB1-201ENST00000361198 CD200P41217 278 aa18.9■□□□□ 0.62
LDB1-201ENST00000361198 NKX6-1P78426 367 aaPredicted RBP18.9■□□□□ 0.62
LDB1-201ENST00000361198 FABP9Q0Z7S8 132 aa18.9■□□□□ 0.62
LDB1-201ENST00000361198 SPRNQ5BIV9 151 aa18.9■□□□□ 0.62
LDB1-201ENST00000361198 LIN7CQ9NUP9 197 aaKnown RBP18.9■□□□□ 0.62
LDB1-201ENST00000361198 RNF150Q9ULK6 438 aa18.9■□□□□ 0.62
LDB1-201ENST00000361198 TP53TG5Q9Y2B4 290 aa18.9■□□□□ 0.62
LDB1-201ENST00000361198 RBMS3Q6XE24 437 aaKnown RBP18.9■□□□□ 0.62
LDB1-201ENST00000361198 RNASE11Q8TAA1 199 aaKnown RBP18.9■□□□□ 0.62
LDB1-201ENST00000361198 RAB39BQ96DA2 213 aa18.9■□□□□ 0.62
LDB1-201ENST00000361198 A8MXE2 369 aa18.89■□□□□ 0.61
LDB1-201ENST00000361198 RAB2AP61019 212 aa18.89■□□□□ 0.61
LDB1-201ENST00000361198 KHDC3LQ587J8 217 aa18.89■□□□□ 0.61
LDB1-201ENST00000361198 IGKV1-5P01602 117 aa18.89■□□□□ 0.61
LDB1-201ENST00000361198 SSTR5P35346 364 aa18.89■□□□□ 0.61
LDB1-201ENST00000361198 KLF3P57682 345 aaPredicted RBP18.89■□□□□ 0.61
LDB1-201ENST00000361198 FOXC1Q12948 553 aa18.89■□□□□ 0.61
LDB1-201ENST00000361198 OR13A1Q8NGR1 328 aa18.89■□□□□ 0.61
LDB1-201ENST00000361198 TCEAL7Q9BRU2 100 aa18.89■□□□□ 0.61
LDB1-201ENST00000361198 SRRM5B3KS81 715 aa18.88■□□□□ 0.61
LDB1-201ENST00000361198 IFNA5P01569 189 aa18.88■□□□□ 0.61
LDB1-201ENST00000361198 OR8U8P0C7N1 319 aa18.88■□□□□ 0.61
LDB1-201ENST00000361198 PRDX2P32119 198 aa18.88■□□□□ 0.61
LDB1-201ENST00000361198 OR2B8PP59922 312 aa18.88■□□□□ 0.61
LDB1-201ENST00000361198 C3orf36Q3SXR2 165 aa18.88■□□□□ 0.61
LDB1-201ENST00000361198 ZNF645Q8N7E2 425 aa18.88■□□□□ 0.61
LDB1-201ENST00000361198 CYB561D1Q8N8Q1 229 aa18.88■□□□□ 0.61
LDB1-201ENST00000361198 OR10G4Q8NGN3 311 aa18.88■□□□□ 0.61
LDB1-201ENST00000361198 OR2V2Q96R30 315 aa18.88■□□□□ 0.61
LDB1-201ENST00000361198 OR2D2Q9H210 308 aa18.88■□□□□ 0.61
LDB1-201ENST00000361198 CACNG5Q9UF02 275 aa18.88■□□□□ 0.61
LDB1-201ENST00000361198 THNSL2Q86YJ6 484 aa18.88■□□□□ 0.61
LDB1-201ENST00000361198 SSUH2Q9Y2M2 353 aa18.88■□□□□ 0.61
LDB1-201ENST00000361198 PCNX1Q96RV3 2341 aa18.87■□□□□ 0.61
LDB1-201ENST00000361198 IGKV1D-17A0A075B6S4 117 aa18.87■□□□□ 0.61
LDB1-201ENST00000361198 H3BP45 60 aa18.87■□□□□ 0.61
LDB1-201ENST00000361198 AP4M1O00189 453 aa18.87■□□□□ 0.61
LDB1-201ENST00000361198 SYNGR2O43760 224 aa18.87■□□□□ 0.61
LDB1-201ENST00000361198 S100A9P06702 114 aaKnown RBP18.87■□□□□ 0.61
LDB1-201ENST00000361198 ZNF429Q86V71 674 aa18.87■□□□□ 0.61
LDB1-201ENST00000361198 GCSAMQ8N6F7 178 aa18.87■□□□□ 0.61
LDB1-201ENST00000361198 C5orf30Q96GV9 206 aa18.87■□□□□ 0.61
LDB1-201ENST00000361198 ZNF737O75373 536 aa18.86■□□□□ 0.61
LDB1-201ENST00000361198 IFNA17P01571 189 aa18.86■□□□□ 0.61
LDB1-201ENST00000361198 TDGF1P3P51864 188 aa18.86■□□□□ 0.61
LDB1-201ENST00000361198 DOLPP1Q86YN1 238 aa18.86■□□□□ 0.61
LDB1-201ENST00000361198 CISD2Q8N5K1 135 aaKnown RBP18.86■□□□□ 0.61
LDB1-201ENST00000361198 RFESDQ8TAC1 157 aa18.86■□□□□ 0.61
LDB1-201ENST00000361198 DCTN5Q9BTE1 182 aa18.86■□□□□ 0.61
LDB1-201ENST00000361198 TOLLIPQ9H0E2 274 aa18.86■□□□□ 0.61
LDB1-201ENST00000361198 SPRY3O43610 288 aa18.86■□□□□ 0.61
LDB1-201ENST00000361198 TAGLN2P37802 199 aaKnown RBP18.86■□□□□ 0.61
LDB1-201ENST00000361198 UBE2KP61086 200 aa18.86■□□□□ 0.61
LDB1-201ENST00000361198 NINJ1Q92982 152 aa18.86■□□□□ 0.61
LDB1-201ENST00000361198 IGLV3-9A0A075B6K5 115 aa18.85■□□□□ 0.61
LDB1-201ENST00000361198 FBP1P09467 338 aa18.85■□□□□ 0.61
LDB1-201ENST00000361198 DLK1P80370 383 aa18.85■□□□□ 0.61
LDB1-201ENST00000361198 TMEM267Q0VDI3 215 aaPredicted RBP18.85■□□□□ 0.61
LDB1-201ENST00000361198 EDDM3AQ14507 147 aa18.85■□□□□ 0.61
LDB1-201ENST00000361198 SLC35E3Q7Z769 313 aa18.85■□□□□ 0.61
LDB1-201ENST00000361198 SPACA3Q8IXA5 215 aa18.85■□□□□ 0.61
LDB1-201ENST00000361198 Q8NA96 180 aa18.85■□□□□ 0.61
LDB1-201ENST00000361198 NANPQ8TBE9 248 aa18.85■□□□□ 0.61
LDB1-201ENST00000361198 TVP23CQ96ET8 276 aa18.85■□□□□ 0.61
LDB1-201ENST00000361198 MEGF10Q96KG7 1140 aa18.85■□□□□ 0.61
LDB1-201ENST00000361198 LURAP1Q96LR2 239 aa18.85■□□□□ 0.61
LDB1-201ENST00000361198 SMG1Q96Q15 3661 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms