RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 MS4A18H0YCH9 400 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 M0QZK8 103 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 TNFSF12O43508 249 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 NPIPB7O75200 414 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 MT-ATP6P00846 226 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 ECI1P42126 302 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 PNRC1Q12796 327 aaPredicted RBP6.54□□□□□ -1.36
CCL28-201ENST00000361115 MS4A18Q3C1V0 323 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 TUSC5Q8IXB3 177 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 LGI3Q8N145 548 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 TMEM251Q8N6I4 163 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 TMEM252Q8N6L7 170 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 LRTM2Q8N967 370 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 ZNF48Q96MX3 618 aaPredicted RBP6.54□□□□□ -1.36
CCL28-201ENST00000361115 PCGF1Q9BSM1 259 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 ANXA10Q9UJ72 324 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 FUT9Q9Y231 359 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 FBN2P35556 2912 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 TCF21O43680 179 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 SSSCA1O60232 199 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 TSPAN2O60636 221 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 TMEM50AO95807 157 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 LY6G6DO95868 133 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 BRS3P32247 399 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 FGF8P55075 233 aaPredicted RBP6.54□□□□□ -1.36
CCL28-201ENST00000361115 SSX7Q7RTT5 188 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 ZNF283Q8N7M2 679 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 ZNF611Q8N823 705 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 TMEM170AQ8WVE7 144 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 DYRK2Q92630 601 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 ANGPTL4Q9BY76 406 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 NGBQ9NPG2 151 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 SLC2A9Q9NRM0 540 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 MED12Q93074 2177 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 SERPINE3A8MV23 424 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 PHF1O43189 567 aaPredicted RBP6.54□□□□□ -1.36
CCL28-201ENST00000361115 NXPH3O95157 252 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 HPRT1P00492 218 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 CD33P20138 364 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 MC5RP33032 325 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 TFPI2P48307 235 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 ZNF154Q13106 437 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 KISS1Q15726 138 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 ADIRFQ15847 76 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 BATFQ16520 125 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 TDRG1Q3Y452 100 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 CXorf66Q5JRM2 361 aaPredicted RBP6.54□□□□□ -1.36
CCL28-201ENST00000361115 FAM69BQ5VUD6 431 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 TRAT1Q6PIZ9 186 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 GBGT1Q8N5D6 347 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 TP53RKQ96S44 253 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 CITED1Q99966 193 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 EMC6Q9BV81 110 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 VSIRQ9H7M9 311 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 ELL3Q9HB65 397 aaPredicted RBP6.54□□□□□ -1.36
CCL28-201ENST00000361115 NAGKQ9UJ70 344 aa6.54□□□□□ -1.36
CCL28-201ENST00000361115 CACNA1DQ01668 2161 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 TEX15Q9BXT5 2789 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 ZNF850A8MQ14 1090 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 NUPR1O60356 82 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 GGCTO75223 188 aaKnown RBP6.53□□□□□ -1.36
CCL28-201ENST00000361115 HBE1P02100 147 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 LCATP04180 440 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 BCL2P10415 239 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 APOBEC3AP31941 199 aaPredicted RBP6.53□□□□□ -1.36
CCL28-201ENST00000361115 ZNF121P58317 390 aaPredicted RBP6.53□□□□□ -1.36
CCL28-201ENST00000361115 RNFT1Q5M7Z0 435 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 LCN15Q6UWW0 184 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 FAM57BQ71RH2 274 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 OR51G1Q8NGK1 321 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 ACY3Q96HD9 319 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 RASL10BQ96S79 203 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 CTDSP1Q9GZU7 261 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 PLEKHJ1Q9NW61 149 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 CISD1Q9NZ45 108 aaKnown RBP6.53□□□□□ -1.36
CCL28-201ENST00000361115 LHFPL6Q9Y693 200 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 PRRC2AP48634 2157 aaKnown RBP6.53□□□□□ -1.36
CCL28-201ENST00000361115 MED13LQ71F56 2210 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 CNTRLQ7Z7A1 2325 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 ZNF705FA8MVS1 300 aaPredicted RBP6.53□□□□□ -1.36
CCL28-201ENST00000361115 ZNF705DP0CH99 300 aaPredicted RBP6.53□□□□□ -1.36
CCL28-201ENST00000361115 ZNF705BP0CI00 300 aaPredicted RBP6.53□□□□□ -1.36
CCL28-201ENST00000361115 TNFSF4P23510 183 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 CCKARP32238 428 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 SLC6A8P48029 635 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 IDH3GP51553 393 aaPredicted RBP6.53□□□□□ -1.36
CCL28-201ENST00000361115 CLDN17P56750 224 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 ZNF726P1Q15940 193 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 TBX15Q96SF7 602 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 CCL19Q99731 98 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 METTL7AQ9H8H3 244 aa6.53□□□□□ -1.36
CCL28-201ENST00000361115 LYRM2Q9NU23 88 aaPredicted RBP6.53□□□□□ -1.36
CCL28-201ENST00000361115 C17orf105B2RV13 164 aa6.52□□□□□ -1.37
CCL28-201ENST00000361115 SIAH2O43255 324 aa6.52□□□□□ -1.37
CCL28-201ENST00000361115 HLA-HP01893 362 aa6.52□□□□□ -1.37
CCL28-201ENST00000361115 IL6RP08887 468 aaPredicted RBP6.52□□□□□ -1.37
CCL28-201ENST00000361115 SLC25A16P16260 332 aa6.52□□□□□ -1.37
CCL28-201ENST00000361115 NKX2-1P43699 371 aaPredicted RBP6.52□□□□□ -1.37
CCL28-201ENST00000361115 POU3F1Q03052 451 aaPredicted RBP6.52□□□□□ -1.37
CCL28-201ENST00000361115 OR5I1Q13606 314 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms