RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 FHITP49789 147 aa11.02□□□□□ -0.65
SQSTM1-201ENST00000360718 BAXQ07812 192 aa11.02□□□□□ -0.65
SQSTM1-201ENST00000360718 ZNF146Q15072 292 aa11.02□□□□□ -0.65
SQSTM1-201ENST00000360718 MOGAT3Q86VF5 341 aa11.02□□□□□ -0.65
SQSTM1-201ENST00000360718 SUMF2Q8NBJ7 301 aa11.02□□□□□ -0.65
SQSTM1-201ENST00000360718 CLEC18CQ8NCF0 446 aa11.02□□□□□ -0.65
SQSTM1-201ENST00000360718 IL22RA2Q969J5 263 aa11.02□□□□□ -0.65
SQSTM1-201ENST00000360718 GNPNAT1Q96EK6 184 aaPredicted RBP11.02□□□□□ -0.65
SQSTM1-201ENST00000360718 DYNLRB1Q9NP97 96 aa11.02□□□□□ -0.65
SQSTM1-201ENST00000360718 LYRM2Q9NU23 88 aaPredicted RBP11.02□□□□□ -0.65
SQSTM1-201ENST00000360718 FBXO7Q9Y3I1 522 aa11.02□□□□□ -0.65
SQSTM1-201ENST00000360718 DOPEY1Q5JWR5 2465 aa11.02□□□□□ -0.65
SQSTM1-201ENST00000360718 UBR5O95071 2799 aaPredicted RBP11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 C17orf100A8MU93 164 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 HSPB6O14558 160 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 ADH4P08319 380 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 AKR1C3P42330 323 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 GATA4P43694 442 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 SNRPEP62304 92 aaKnown RBP11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 POLR2GP62487 172 aaKnown RBP eCLIP11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 CLINT1Q14677 625 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 SOHLH1Q5JUK2 328 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 ETV3LQ6ZN32 361 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 ACP7Q6ZNF0 438 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 RDH5Q92781 318 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 MS4A5Q9H3V2 200 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 OR14J1Q9UGF5 321 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 B9A039 149 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 WRBO00258 174 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 UCP1P25874 307 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 ATP6V0CP27449 155 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 CFHR2P36980 270 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 RAB2AP61019 212 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 KRBOX4Q5JUW0 171 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 GAPTQ8N292 157 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 ZCCHC24Q8N2G6 241 aaKnown RBP11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 TMEM252Q8N6L7 170 aa11.01□□□□□ -0.65
SQSTM1-201ENST00000360718 IGSF23A1L1A6 192 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 C5orf52A6NGY3 159 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 SIRPB1O00241 398 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 WNT9BO14905 357 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 ADAM20O43506 726 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 OR2H2O95918 312 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 HAND1O96004 215 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 SCTP09683 121 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 IRF2P14316 349 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 MDH2P40926 338 aaKnown RBP11□□□□□ -0.65
SQSTM1-201ENST00000360718 ID3Q02535 119 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 TESK1Q15569 626 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 EFNB3Q15768 340 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 Q6P435 159 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 TCEAL7Q9BRU2 100 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 UTP20O75691 2785 aaKnown RBP11□□□□□ -0.65
SQSTM1-201ENST00000360718 TANC2Q9HCD6 1990 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 TRAV24A0A0B4J272 114 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 RBFOX3A6NFN3 312 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 SRRM5B3KS81 715 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 SSSCA1O60232 199 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 TUSC2O75896 110 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 CD55P08174 381 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 RAB5AP20339 215 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 SULT1A1P50225 295 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 ZNF672Q499Z4 452 aaPredicted RBP11□□□□□ -0.65
SQSTM1-201ENST00000360718 KIAA2026Q5HYC2 2103 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 ZNF818PQ6ZRF7 136 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 FAM90A1Q86YD7 464 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 OR5D13Q8NGL4 314 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 C20orf24Q9BUV8 137 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 GCM1Q9NP62 436 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 RNF7Q9UBF6 113 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 PPP1R3CQ9UQK1 317 aa11□□□□□ -0.65
SQSTM1-201ENST00000360718 H0Y980 276 aa10.99□□□□□ -0.65
SQSTM1-201ENST00000360718 UBE2CO00762 179 aa10.99□□□□□ -0.65
SQSTM1-201ENST00000360718 EIF3GO75821 320 aaKnown RBP eCLIP10.99□□□□□ -0.65
SQSTM1-201ENST00000360718 OR13C7P0DN81 318 aa10.99□□□□□ -0.65
SQSTM1-201ENST00000360718 PPP1CCP36873 323 aaKnown RBP10.99□□□□□ -0.65
SQSTM1-201ENST00000360718 MALSU1Q96EH3 234 aa10.99□□□□□ -0.65
SQSTM1-201ENST00000360718 DSCAMO60469 2012 aa10.99□□□□□ -0.65
SQSTM1-201ENST00000360718 RAI1Q7Z5J4 1906 aaPredicted RBP10.99□□□□□ -0.65
SQSTM1-201ENST00000360718 LRRC30A6NM36 301 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 IFNL4K9M1U5 179 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 SLC33A1O00400 549 aaPredicted RBP10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 HSD17B6O14756 317 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 OMGP23515 440 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 CCL8P80075 99 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 NMSQ5H8A3 153 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 CXorf66Q5JRM2 361 aaPredicted RBP10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 DPPA3Q6W0C5 159 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 TGIF2LYQ8IUE0 185 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 MUC15Q8N387 334 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 OR5C1Q8NGR4 320 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 FAM222BQ8WU58 562 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 ZNF251Q9BRH9 671 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 TMEM204Q9BSN7 226 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 SAP30LQ9HAJ7 183 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 CCL28Q9NRJ3 127 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 TREM2Q9NZC2 230 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 KIAA1456Q9P272 454 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 FAM208BQ5VWN6 2430 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 A0A1W2PPH5 198 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms