RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 SDHAF2Q9NX18 166 aa10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 SOX21Q9Y651 276 aaPredicted RBP10.04□□□□□ -0.8
NIF3L1-201ENST00000359683 SAA2-SAA4A0A096LPE2 208 aa10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 OOSP1A8MZH6 123 aa10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 SAA2P0DJI9 122 aaPredicted RBP10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 BTCP35070 178 aa10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 SRP14P37108 136 aaKnown RBP10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 GPR12P47775 334 aa10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 ZNF816Q0VGE8 651 aaPredicted RBP10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 DIAPH2-AS1Q14236 149 aa10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 FAM71F2Q6NXP2 309 aa10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 LPCAT3Q6P1A2 487 aa10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 C16orf87Q6PH81 154 aa10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 IDO2Q6ZQW0 420 aa10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 BCL6BQ8N143 479 aaPredicted RBP10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 DYNAPQ8N1N2 210 aa10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 DRAM1Q8N682 238 aa10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 ZNF645Q8N7E2 425 aa10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 SECTM1Q8WVN6 248 aa10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 TOMM40LQ969M1 308 aa10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 C5orf30Q96GV9 206 aa10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 S1PR3Q99500 378 aa10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 MEGF9Q9H1U4 602 aa10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 CDC42EP3Q9UKI2 254 aa10.03□□□□□ -0.8
NIF3L1-201ENST00000359683 SVEP1Q4LDE5 3571 aa10.02□□□□□ -0.81
NIF3L1-201ENST00000359683 A0A0U1RQK1 487 aa10.02□□□□□ -0.81
NIF3L1-201ENST00000359683 GAPDHP04406 335 aaKnown RBP10.02□□□□□ -0.81
NIF3L1-201ENST00000359683 ECI1P42126 302 aa10.02□□□□□ -0.81
NIF3L1-201ENST00000359683 SURF2Q15527 256 aaPredicted RBP10.02□□□□□ -0.81
NIF3L1-201ENST00000359683 RPL39P5Q59GN2 51 aa10.02□□□□□ -0.81
NIF3L1-201ENST00000359683 ZBTB34Q8NCN2 500 aa10.02□□□□□ -0.81
NIF3L1-201ENST00000359683 RPEQ96AT9 228 aa10.02□□□□□ -0.81
NIF3L1-201ENST00000359683 AKR1E2Q96JD6 320 aa10.02□□□□□ -0.81
NIF3L1-201ENST00000359683 SLC25A21Q9BQT8 299 aaPredicted RBP10.02□□□□□ -0.81
NIF3L1-201ENST00000359683 RSRP1Q9BUV0 290 aa10.02□□□□□ -0.81
NIF3L1-201ENST00000359683 BEX2Q9BXY8 128 aa10.02□□□□□ -0.81
NIF3L1-201ENST00000359683 GPR132Q9UNW8 380 aa10.02□□□□□ -0.81
NIF3L1-201ENST00000359683 HSD17B6O14756 317 aa10.01□□□□□ -0.81
NIF3L1-201ENST00000359683 SLC6A1P30531 599 aa10.01□□□□□ -0.81
NIF3L1-201ENST00000359683 CCR6P51684 374 aa10.01□□□□□ -0.81
NIF3L1-201ENST00000359683 EIF4EBP1Q13541 118 aaPredicted RBP10.01□□□□□ -0.81
NIF3L1-201ENST00000359683 DCTN2Q13561 401 aaKnown RBP10.01□□□□□ -0.81
NIF3L1-201ENST00000359683 SSX2Q16385 188 aa10.01□□□□□ -0.81
NIF3L1-201ENST00000359683 PLA1AQ53H76 456 aa10.01□□□□□ -0.81
NIF3L1-201ENST00000359683 MZT2BQ6NZ67 158 aa10.01□□□□□ -0.81
NIF3L1-201ENST00000359683 ZNF818PQ6ZRF7 136 aa10.01□□□□□ -0.81
NIF3L1-201ENST00000359683 SLC38A6Q8IZM9 456 aa10.01□□□□□ -0.81
NIF3L1-201ENST00000359683 OR8H3Q8N146 312 aa10.01□□□□□ -0.81
NIF3L1-201ENST00000359683 BVESQ8NE79 360 aa10.01□□□□□ -0.81
NIF3L1-201ENST00000359683 ZFAND1Q8TCF1 268 aa10.01□□□□□ -0.81
NIF3L1-201ENST00000359683 MARCH1Q8TCQ1 289 aa10.01□□□□□ -0.81
NIF3L1-201ENST00000359683 RTN4IP1Q8WWV3 396 aaPredicted RBP10.01□□□□□ -0.81
NIF3L1-201ENST00000359683 PRDM13Q9H4Q3 707 aa10.01□□□□□ -0.81
NIF3L1-201ENST00000359683 FAM96BQ9Y3D0 163 aa10.01□□□□□ -0.81
NIF3L1-201ENST00000359683 HILPDAQ9Y5L2 63 aa10.01□□□□□ -0.81
NIF3L1-201ENST00000359683 MXRA5Q9NR99 2828 aa10.01□□□□□ -0.81
NIF3L1-201ENST00000359683 A0A1W2PPI3 338 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 GPR31O00270 319 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 TXNL1O43396 289 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 CT45A6P0DMU7 189 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 CT45A5P0DMU8 189 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 CT45A7P0DMV0 189 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 PGAM2P15259 253 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 DEFA1P59665 94 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 DEFA3P59666 94 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 CCDC144NLQ6NUI1 221 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 TGIF2LXQ8IUE1 241 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 C22orf15Q8WYQ4 148 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 ZNF486Q96H40 463 aaPredicted RBP10□□□□□ -0.81
NIF3L1-201ENST00000359683 SCGB3A2Q96PL1 93 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 NABP2Q9BQ15 211 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 RTBDNQ9BSG5 229 aaPredicted RBP10□□□□□ -0.81
NIF3L1-201ENST00000359683 IGHV1-3A0A0C4DH29 117 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 VGLL3A8MV65 326 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 M0R1X1 148 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 CRLF1O75462 422 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 NDUFB6O95139 128 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 CTSDP07339 412 aaPredicted RBP10□□□□□ -0.81
NIF3L1-201ENST00000359683 FBP1P09467 338 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 PAX6P26367 422 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 DUTP33316 252 aaKnown RBP10□□□□□ -0.81
NIF3L1-201ENST00000359683 REG1BP48304 166 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 BAMBIQ13145 260 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 HABP2Q14520 560 aaPredicted RBP10□□□□□ -0.81
NIF3L1-201ENST00000359683 RBMS2Q15434 407 aaKnown RBP10□□□□□ -0.81
NIF3L1-201ENST00000359683 DEFB112Q30KQ8 113 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 ZNF66Q6ZN08 573 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 ZDHHC22Q8N966 263 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 POC5Q8NA72 575 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 MRPL20Q9BYC9 149 aaKnown RBP10□□□□□ -0.81
NIF3L1-201ENST00000359683 VSIG4Q9Y279 399 aa10□□□□□ -0.81
NIF3L1-201ENST00000359683 PGLYRP1O75594 196 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-201ENST00000359683 SRD5A1P18405 259 aa9.99□□□□□ -0.81
NIF3L1-201ENST00000359683 DYNLT3P51808 116 aa9.99□□□□□ -0.81
NIF3L1-201ENST00000359683 LINC00205P59089 165 aa9.99□□□□□ -0.81
NIF3L1-201ENST00000359683 RND3P61587 244 aa9.99□□□□□ -0.81
NIF3L1-201ENST00000359683 AANATQ16613 207 aa9.99□□□□□ -0.81
NIF3L1-201ENST00000359683 CMTM1Q8IZ96 169 aa9.99□□□□□ -0.81
NIF3L1-201ENST00000359683 DRAXINQ8NBI3 349 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-201ENST00000359683 DUSP18Q8NEJ0 188 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms