RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 MMP16P51512 607 aa15.87■□□□□ 0.13
SHANK1-202ENST00000359082 NEU1Q99519 415 aa15.87■□□□□ 0.13
SHANK1-202ENST00000359082 IDI2-AS1Q9NZ38 188 aa15.87■□□□□ 0.13
SHANK1-202ENST00000359082 PHLDA3Q9Y5J5 127 aa15.87■□□□□ 0.13
SHANK1-202ENST00000359082 hCG_38984A0A1B0GV85 526 aa15.86■□□□□ 0.13
SHANK1-202ENST00000359082 COX6CP09669 75 aa15.86■□□□□ 0.13
SHANK1-202ENST00000359082 ASAH2BP0C7U1 165 aa15.86■□□□□ 0.13
SHANK1-202ENST00000359082 C2orf83Q53S99 150 aa15.86■□□□□ 0.13
SHANK1-202ENST00000359082 CISD1Q9NZ45 108 aaKnown RBP15.86■□□□□ 0.13
SHANK1-202ENST00000359082 ZDHHC8Q9ULC8 765 aa15.86■□□□□ 0.13
SHANK1-202ENST00000359082 SIAH2O43255 324 aa15.86■□□□□ 0.13
SHANK1-202ENST00000359082 IGHV4-34P06331 123 aa15.86■□□□□ 0.13
SHANK1-202ENST00000359082 NUP37Q8NFH4 326 aa15.86■□□□□ 0.13
SHANK1-202ENST00000359082 F11RQ9Y624 299 aaKnown RBP15.86■□□□□ 0.13
SHANK1-202ENST00000359082 C5orf67F2Z3F1 127 aa15.86■□□□□ 0.13
SHANK1-202ENST00000359082 TLNRD1Q9H1K6 362 aa15.86■□□□□ 0.13
SHANK1-202ENST00000359082 A0A1W2PP11 408 aa15.86■□□□□ 0.13
SHANK1-202ENST00000359082 GCSAMLQ5JQS6 135 aa15.86■□□□□ 0.13
SHANK1-202ENST00000359082 FAM27BQ5VT28 67 aa15.86■□□□□ 0.13
SHANK1-202ENST00000359082 A0A0U1RQV5 110 aa15.85■□□□□ 0.13
SHANK1-202ENST00000359082 RPL8P62917 257 aaKnown RBP15.85■□□□□ 0.13
SHANK1-202ENST00000359082 IGHV3OR16-10A0A075B7F0 116 aa15.85■□□□□ 0.13
SHANK1-202ENST00000359082 TGIF2-C20orf24A0A0A6YYL0 155 aa15.85■□□□□ 0.13
SHANK1-202ENST00000359082 SMRP1Q8NCR6 262 aa15.85■□□□□ 0.13
SHANK1-202ENST00000359082 ZNF501Q96CX3 271 aaPredicted RBP15.85■□□□□ 0.13
SHANK1-202ENST00000359082 MARS2Q96GW9 593 aaKnown RBP15.85■□□□□ 0.13
SHANK1-202ENST00000359082 GPHA2Q96T91 129 aa15.85■□□□□ 0.13
SHANK1-202ENST00000359082 NKX2-8O15522 239 aa15.85■□□□□ 0.13
SHANK1-202ENST00000359082 TRGC2P03986 189 aa15.85■□□□□ 0.13
SHANK1-202ENST00000359082 SNAI3Q3KNW1 292 aa15.85■□□□□ 0.13
SHANK1-202ENST00000359082 FAM214BQ7L5A3 538 aa15.85■□□□□ 0.13
SHANK1-202ENST00000359082 H3BTX0 84 aa15.85■□□□□ 0.13
SHANK1-202ENST00000359082 PGLYRP1O75594 196 aaPredicted RBP15.85■□□□□ 0.13
SHANK1-202ENST00000359082 MC5RP33032 325 aa15.85■□□□□ 0.13
SHANK1-202ENST00000359082 PSG9Q00887 426 aa15.85■□□□□ 0.13
SHANK1-202ENST00000359082 MRPL13Q9BYD1 178 aaKnown RBP15.85■□□□□ 0.13
SHANK1-202ENST00000359082 MRPL18Q9H0U6 180 aaKnown RBP15.85■□□□□ 0.13
SHANK1-202ENST00000359082 KLK15Q9H2R5 256 aa15.85■□□□□ 0.13
SHANK1-202ENST00000359082 SLC22A18ASQ8N1D0 253 aa15.85■□□□□ 0.13
SHANK1-202ENST00000359082 MAP1LC3AQ9H492 121 aa15.85■□□□□ 0.13
SHANK1-202ENST00000359082 TMEM229AB2RXF0 380 aa15.84■□□□□ 0.13
SHANK1-202ENST00000359082 PPP1R17O96001 155 aa15.84■□□□□ 0.13
SHANK1-202ENST00000359082 ATP5G2Q06055 141 aa15.84■□□□□ 0.13
SHANK1-202ENST00000359082 SELENOHQ8IZQ5 122 aaKnown RBP15.84■□□□□ 0.13
SHANK1-202ENST00000359082 EIF3GO75821 320 aaKnown RBP eCLIP15.84■□□□□ 0.13
SHANK1-202ENST00000359082 MPV17P39210 176 aa15.84■□□□□ 0.13
SHANK1-202ENST00000359082 SERF2P84101 59 aa15.84■□□□□ 0.13
SHANK1-202ENST00000359082 RAX2Q96IS3 184 aa15.84■□□□□ 0.13
SHANK1-202ENST00000359082 TIMP4Q99727 224 aa15.84■□□□□ 0.13
SHANK1-202ENST00000359082 GAGE10A6NGK3 116 aa15.84■□□□□ 0.13
SHANK1-202ENST00000359082 HKR1P10072 659 aa15.84■□□□□ 0.13
SHANK1-202ENST00000359082 FABP2P12104 132 aa15.84■□□□□ 0.13
SHANK1-202ENST00000359082 RARRES2Q99969 163 aa15.84■□□□□ 0.13
SHANK1-202ENST00000359082 A0A1W2PQF6 199 aa15.84■□□□□ 0.13
SHANK1-202ENST00000359082 RND2P52198 227 aa15.84■□□□□ 0.13
SHANK1-202ENST00000359082 SHISA5Q8N114 240 aa15.84■□□□□ 0.13
SHANK1-202ENST00000359082 ZNF430Q9H8G1 570 aaPredicted RBP15.84■□□□□ 0.13
SHANK1-202ENST00000359082 TMEM177Q53S58 311 aa15.84■□□□□ 0.13
SHANK1-202ENST00000359082 TMEM222Q9H0R3 208 aa15.84■□□□□ 0.13
SHANK1-202ENST00000359082 CALYQ9NYX4 217 aa15.84■□□□□ 0.13
SHANK1-202ENST00000359082 ELF5Q9UKW6 265 aaPredicted RBP15.84■□□□□ 0.13
SHANK1-202ENST00000359082 TRBV5-3A0A0A0MS03 114 aa15.83■□□□□ 0.13
SHANK1-202ENST00000359082 THY1P04216 161 aa15.83■□□□□ 0.12
SHANK1-202ENST00000359082 RGPD4Q7Z3J3 1758 aa15.83■□□□□ 0.12
SHANK1-202ENST00000359082 C7orf71A4D174 169 aa15.83■□□□□ 0.12
SHANK1-202ENST00000359082 SLC25A17O43808 307 aa15.83■□□□□ 0.12
SHANK1-202ENST00000359082 ARL14EPLP0DKL9 152 aa15.83■□□□□ 0.12
SHANK1-202ENST00000359082 FAM74A4Q5TZK3 123 aa15.83■□□□□ 0.12
SHANK1-202ENST00000359082 OR52M1Q8NGK5 317 aa15.83■□□□□ 0.12
SHANK1-202ENST00000359082 THSD7AQ9UPZ6 1657 aa15.83■□□□□ 0.12
SHANK1-202ENST00000359082 GZMMP51124 257 aa15.83■□□□□ 0.12
SHANK1-202ENST00000359082 CXorf66Q5JRM2 361 aaPredicted RBP15.83■□□□□ 0.12
SHANK1-202ENST00000359082 MEIG1Q5JSS6 88 aa15.83■□□□□ 0.12
SHANK1-202ENST00000359082 STPG1Q5TH74 334 aa15.82■□□□□ 0.12
SHANK1-202ENST00000359082 C1orf174Q8IYL3 243 aa15.82■□□□□ 0.12
SHANK1-202ENST00000359082 GPR146Q96CH1 333 aa15.82■□□□□ 0.12
SHANK1-202ENST00000359082 SGK494Q96LW2 274 aa15.82■□□□□ 0.12
SHANK1-202ENST00000359082 GPR82Q96P67 336 aa15.82■□□□□ 0.12
SHANK1-202ENST00000359082 TSPAN2O60636 221 aa15.82■□□□□ 0.12
SHANK1-202ENST00000359082 MFAP4P55083 255 aa15.82■□□□□ 0.12
SHANK1-202ENST00000359082 DXOO77932 396 aaKnown RBP15.82■□□□□ 0.12
SHANK1-202ENST00000359082 TMPRSS3P57727 454 aa15.82■□□□□ 0.12
SHANK1-202ENST00000359082 ZNF56Q15929 161 aa15.82■□□□□ 0.12
SHANK1-202ENST00000359082 TMEM252Q8N6L7 170 aa15.82■□□□□ 0.12
SHANK1-202ENST00000359082 ZIC3O60481 467 aa15.82■□□□□ 0.12
SHANK1-202ENST00000359082 FTH1P19P0C7X4 201 aa15.82■□□□□ 0.12
SHANK1-202ENST00000359082 VKORC1L1Q8N0U8 176 aa15.82■□□□□ 0.12
SHANK1-202ENST00000359082 STPG3Q8N7X2 389 aa15.82■□□□□ 0.12
SHANK1-202ENST00000359082 CFHR5Q9BXR6 569 aa15.82■□□□□ 0.12
SHANK1-202ENST00000359082 C1QL1O75973 258 aa15.82■□□□□ 0.12
SHANK1-202ENST00000359082 PLP1P60201 277 aa15.82■□□□□ 0.12
SHANK1-202ENST00000359082 FAM209BQ5JX69 171 aa15.82■□□□□ 0.12
SHANK1-202ENST00000359082 PRRC2BQ5JSZ5 2229 aaKnown RBP15.81■□□□□ 0.12
SHANK1-202ENST00000359082 GPX1P07203 203 aa15.81■□□□□ 0.12
SHANK1-202ENST00000359082 VAX1Q5SQQ9 334 aa15.81■□□□□ 0.12
SHANK1-202ENST00000359082 COL25A1Q9BXS0 654 aaPredicted RBP15.81■□□□□ 0.12
SHANK1-202ENST00000359082 RBFOX2O43251 390 aaKnown RBP eCLIP15.81■□□□□ 0.12
SHANK1-202ENST00000359082 LAMTOR1Q6IAA8 161 aa15.81■□□□□ 0.12
SHANK1-202ENST00000359082 SRSF12Q8WXF0 261 aaKnown RBP15.81■□□□□ 0.12
SHANK1-202ENST00000359082 NRIP2Q9BQI9 281 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms