RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 FAM53AQ6NSI3 398 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-203ENST00000358528 SSX7Q7RTT5 188 aa5.59□□□□□ -1.51
CSDE1-203ENST00000358528 NUFIP2Q7Z417 695 aaKnown RBP5.59□□□□□ -1.51
CSDE1-203ENST00000358528 TMEM183AQ8IXX5 376 aa5.59□□□□□ -1.51
CSDE1-203ENST00000358528 OR5A2Q8NGI9 324 aa5.59□□□□□ -1.51
CSDE1-203ENST00000358528 SCRT1Q9BWW7 348 aa5.59□□□□□ -1.51
CSDE1-203ENST00000358528 WDR61Q9GZS3 305 aaKnown RBP5.59□□□□□ -1.51
CSDE1-203ENST00000358528 PLEKHA3Q9HB20 300 aa5.59□□□□□ -1.51
CSDE1-203ENST00000358528 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-203ENST00000358528 TP53TG5Q9Y2B4 290 aa5.59□□□□□ -1.51
CSDE1-203ENST00000358528 A0A1B0GUS0 222 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 ZNF716A6NP11 495 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 TIMM8AO60220 97 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-203ENST00000358528 OR2H2O95918 312 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 AMBPP02760 352 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 MGST1P10620 155 aaKnown RBP5.58□□□□□ -1.52
CSDE1-203ENST00000358528 NTF3P20783 257 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 ARR3P36575 388 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 PAX9P55771 341 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 ERVK-16P61578 105 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 PAX5Q02548 391 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 ACOT6Q3I5F7 207 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-203ENST00000358528 TMEM164Q5U3C3 297 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 MRPL14Q6P1L8 145 aaKnown RBP5.58□□□□□ -1.52
CSDE1-203ENST00000358528 DRAM1Q8N682 238 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 SGMS2Q8NHU3 365 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 TMEM147Q9BVK8 224 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 OR2J1Q9GZK6 312 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 CTDSP1Q9GZU7 261 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 PARD6AQ9NPB6 346 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 PLSCR2Q9NRY7 297 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 TRAV34A0A0B4J273 112 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 CTXND1A0A1B0GTU2 59 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 ST8SIA5O15466 376 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 TCL1AP56279 114 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 RPL23P62829 140 aaKnown RBP5.58□□□□□ -1.52
CSDE1-203ENST00000358528 SERF2P84101 59 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 TBC1D28Q2M2D7 210 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 GCSAMLQ5JQS6 135 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 TCF23Q7RTU1 214 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 MAFAQ8NHW3 353 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-203ENST00000358528 IMMP1LQ96LU5 166 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 PRDM13Q9H4Q3 707 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 SRD5A3Q9H8P0 318 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 TCFL5Q9UL49 500 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 PTPRZ1P23471 2315 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-203ENST00000358528 DUXBA0A1W2PPF3 345 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 PINLYPA6NC86 204 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 RAMP3O60896 148 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 S1PR2O95136 353 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 MT-CO3P00414 261 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 HRASP01112 189 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 WNT5AP41221 380 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 CNN1P51911 297 aaKnown RBP5.58□□□□□ -1.52
CSDE1-203ENST00000358528 DBX2Q6ZNG2 339 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 Q6ZPA2 131 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 RPP25LQ8N5L8 163 aaKnown RBP5.58□□□□□ -1.52
CSDE1-203ENST00000358528 TBX15Q96SF7 602 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 DEPPQ9NTK1 212 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 POLDIP2Q9Y2S7 368 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 TRAV24A0A0B4J272 114 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 WNT9BO14905 357 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 LAMTOR5O43504 91 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 KBTBD11O94819 623 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 IGLV3-1P01715 115 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 TNFRSF9Q07011 255 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 OR1C1Q15619 314 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 LRRC75BQ2VPJ9 315 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 ACSM6Q6P461 480 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 C6orf15Q6UXA7 325 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-203ENST00000358528 DPPA3Q6W0C5 159 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 VKORC1L1Q8N0U8 176 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 PLPPR1Q8TBJ4 325 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 BTF3L4Q96K17 158 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 IMMP2LQ96T52 175 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 DECR2Q9NUI1 292 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 LOXL2Q9Y4K0 774 aa5.58□□□□□ -1.52
CSDE1-203ENST00000358528 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-203ENST00000358528 A8MXE2 369 aa5.57□□□□□ -1.52
CSDE1-203ENST00000358528 IGKV1-5P01602 117 aa5.57□□□□□ -1.52
CSDE1-203ENST00000358528 MBP02144 154 aa5.57□□□□□ -1.52
CSDE1-203ENST00000358528 PMCHP20382 165 aa5.57□□□□□ -1.52
CSDE1-203ENST00000358528 GPR12P47775 334 aa5.57□□□□□ -1.52
CSDE1-203ENST00000358528 ATP5G3P48201 142 aa5.57□□□□□ -1.52
CSDE1-203ENST00000358528 ZNF726P1Q15940 193 aa5.57□□□□□ -1.52
CSDE1-203ENST00000358528 MDP1Q86V88 176 aa5.57□□□□□ -1.52
CSDE1-203ENST00000358528 DMRTC2Q8IXT2 367 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-203ENST00000358528 OR8G5Q8NG78 346 aa5.57□□□□□ -1.52
CSDE1-203ENST00000358528 VN1R17PQ8TDU5 208 aa5.57□□□□□ -1.52
CSDE1-203ENST00000358528 SAP25Q8TEE9 199 aa5.57□□□□□ -1.52
CSDE1-203ENST00000358528 DNASE2BQ8WZ79 361 aa5.57□□□□□ -1.52
CSDE1-203ENST00000358528 REPIN1Q9BWE0 567 aaKnown RBP5.57□□□□□ -1.52
CSDE1-203ENST00000358528 PCED1AQ9H1Q7 454 aa5.57□□□□□ -1.52
CSDE1-203ENST00000358528 WDR54Q9H977 334 aa5.57□□□□□ -1.52
CSDE1-203ENST00000358528 IL36GQ9NZH8 169 aa5.57□□□□□ -1.52
CSDE1-203ENST00000358528 M0R1X1 148 aa5.57□□□□□ -1.52
CSDE1-203ENST00000358528 KLF7O75840 302 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-203ENST00000358528 OR4A8P0C604 315 aa5.57□□□□□ -1.52
CSDE1-203ENST00000358528 HOXA6P31267 233 aa5.57□□□□□ -1.52
CSDE1-203ENST00000358528 TAS2R60P59551 318 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms