RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 MFRPQ9BY79 579 aa7.65□□□□□ -1.19
COL6A6-201ENST00000358511 THYN1Q9P016 225 aa7.65□□□□□ -1.19
COL6A6-201ENST00000358511 HIST1H2BKO60814 126 aa7.65□□□□□ -1.19
COL6A6-201ENST00000358511 CA11O75493 328 aa7.65□□□□□ -1.19
COL6A6-201ENST00000358511 HIST1H2BJP06899 126 aa7.65□□□□□ -1.19
COL6A6-201ENST00000358511 HOXB3P14651 431 aaPredicted RBP7.65□□□□□ -1.19
COL6A6-201ENST00000358511 HIST1H2BOP23527 126 aa7.65□□□□□ -1.19
COL6A6-201ENST00000358511 HIST1H2BBP33778 126 aa7.65□□□□□ -1.19
COL6A6-201ENST00000358511 HIST1H2BDP58876 126 aa7.65□□□□□ -1.19
COL6A6-201ENST00000358511 HIST1H2BCP62807 126 aa7.65□□□□□ -1.19
COL6A6-201ENST00000358511 HIST2H2BEQ16778 126 aa7.65□□□□□ -1.19
COL6A6-201ENST00000358511 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.65□□□□□ -1.19
COL6A6-201ENST00000358511 HIST1H2BHQ93079 126 aa7.65□□□□□ -1.19
COL6A6-201ENST00000358511 HIST1H2BNQ99877 126 aa7.65□□□□□ -1.19
COL6A6-201ENST00000358511 HIST1H2BMQ99879 126 aa7.65□□□□□ -1.19
COL6A6-201ENST00000358511 LIPFP07098 398 aa7.65□□□□□ -1.19
COL6A6-201ENST00000358511 COX6CP09669 75 aa7.65□□□□□ -1.19
COL6A6-201ENST00000358511 CXCL12P48061 93 aa7.65□□□□□ -1.19
COL6A6-201ENST00000358511 KLRB1Q12918 225 aa7.65□□□□□ -1.19
COL6A6-201ENST00000358511 JOSD1Q15040 202 aaPredicted RBP7.65□□□□□ -1.19
COL6A6-201ENST00000358511 TMEM252Q8N6L7 170 aa7.65□□□□□ -1.19
COL6A6-201ENST00000358511 C9orf172C9J069 976 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 ZNF506Q5JVG8 444 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 POC1AQ8NBT0 407 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 FREM1Q5H8C1 2179 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 GPR3P46089 330 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 RPEQ96AT9 228 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 MRGPRX1Q96LB2 322 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 MYOZ1Q9NP98 299 aaPredicted RBP7.64□□□□□ -1.19
COL6A6-201ENST00000358511 KLHDC2Q9Y2U9 406 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 SOX21Q9Y651 276 aaPredicted RBP7.64□□□□□ -1.19
COL6A6-201ENST00000358511 CREBBPQ92793 2442 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 K7ESF4 209 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 CBLN1P23435 193 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 TNFSF10P50591 281 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 GFERP55789 205 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 TWIST1Q15672 202 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 RNFT1Q5M7Z0 435 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 ANKRD37Q7Z713 158 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 TAF15Q92804 592 aaKnown RBP eCLIP7.64□□□□□ -1.19
COL6A6-201ENST00000358511 KLF13Q9Y2Y9 288 aaPredicted RBP7.64□□□□□ -1.19
COL6A6-201ENST00000358511 PXMP4Q9Y6I8 212 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 EPHA8P29322 1005 aaPredicted RBP7.64□□□□□ -1.19
COL6A6-201ENST00000358511 KIR3DL2P43630 455 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 RNF186Q9NXI6 227 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 ZNF106Q9H2Y7 1883 aaKnown RBP7.64□□□□□ -1.19
COL6A6-201ENST00000358511 OR52M1Q8NGK5 317 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 OR10D3Q8NH80 312 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 IL36RNQ9UBH0 155 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 CLN8Q9UBY8 286 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 LIPT2A6NK58 231 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 RBM11P57052 281 aaKnown RBP7.64□□□□□ -1.19
COL6A6-201ENST00000358511 FAM169BQ8N8A8 192 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 ZNF296Q8WUU4 475 aaPredicted RBP7.64□□□□□ -1.19
COL6A6-201ENST00000358511 A0A1W2PQD3 144 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 SHISA8B8ZZ34 492 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 EML2O95834 649 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 CT62P0C5K7 136 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 TNFRSF1AP19438 455 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 ZIC1Q15915 447 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 PRSS41Q7RTY9 318 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 ELSPBP1Q96BH3 223 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 RASL11BQ9BPW5 248 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 RPL36A-HNRNPH2H7BZ11 118 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 LINC00614P0C842 121 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 RFESDQ8TAC1 157 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 PAXXQ9BUH6 204 aa7.64□□□□□ -1.19
COL6A6-201ENST00000358511 FNDC1Q4ZHG4 1894 aaPredicted RBP7.63□□□□□ -1.19
COL6A6-201ENST00000358511 FAM90A26D6RGX4 464 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 M0R1B8 84 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 PPP1CAP62136 330 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 C1QL4Q86Z23 238 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 DEFB108BQ8NET1 73 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 ABHD3Q8WU67 409 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 PLPPR2Q96GM1 343 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 DERL1Q9BUN8 251 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 KLF3P57682 345 aaPredicted RBP7.63□□□□□ -1.19
COL6A6-201ENST00000358511 PROCRQ9UNN8 238 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 RLFQ13129 1914 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 A0A1W2PPC4 97 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 AMMECR1LQ6DCA0 310 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 Q8WTZ3 238 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 NPVFQ9HCQ7 196 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 TINAGQ9UJW2 476 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 PSG6Q00889 435 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 C11orf68Q9H3H3 251 aaKnown RBP7.63□□□□□ -1.19
COL6A6-201ENST00000358511 YBX2Q9Y2T7 364 aaKnown RBP7.63□□□□□ -1.19
COL6A6-201ENST00000358511 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 METAP1P53582 386 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 ROM1Q03395 351 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 FUT5Q11128 374 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 SLC23A3Q6PIS1 610 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 OR4X1Q8NH49 305 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 ZPLD1Q8TCW7 415 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 HDHD3Q9BSH5 251 aaPredicted RBP7.63□□□□□ -1.19
COL6A6-201ENST00000358511 EML5Q05BV3 1969 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 TRBV5-7A0A0A0MS05 114 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 ZNF260Q3ZCT1 412 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 PQLC2Q6ZP29 291 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 VN1R4Q7Z5H5 301 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms