RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 TEPPQ6URK8 271 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 TRIP12Q14669 1992 aaPredicted RBP8.5□□□□□ -1.05
CHD3-202ENST00000358181 TMEM229BQ8NBD8 167 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 C8orf46Q8TAG6 207 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 MRPL30Q8TCC3 161 aaKnown RBP8.49□□□□□ -1.05
CHD3-202ENST00000358181 FAM168AQ92567 244 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 MDKP21741 143 aaPredicted RBP8.49□□□□□ -1.05
CHD3-202ENST00000358181 LDLRAD2Q5SZI1 272 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 DLEU7Q6UYE1 221 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 IGHV3-73A0A0B4J1V6 119 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 CXorf1O96002 111 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 SNRPEP62304 92 aaKnown RBP8.49□□□□□ -1.05
CHD3-202ENST00000358181 FXYD3Q14802 87 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 SELENOHQ8IZQ5 122 aaKnown RBP8.49□□□□□ -1.05
CHD3-202ENST00000358181 MRPL24Q96A35 216 aaKnown RBP8.49□□□□□ -1.05
CHD3-202ENST00000358181 SPSB1Q96BD6 273 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 WIPI2Q9Y4P8 454 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 TRBV20OR9-2A0A075B6H5 130 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 HIST1H4AP62805 103 aaKnown RBP8.49□□□□□ -1.05
CHD3-202ENST00000358181 KLF9Q13886 244 aaPredicted RBP8.49□□□□□ -1.05
CHD3-202ENST00000358181 FAM209AQ5JX71 171 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 PRSS54Q6PEW0 395 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 GATD1Q8NB37 220 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 PP6455Q8WZ26 134 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 DUSP21Q9H596 190 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 CCL28Q9NRJ3 127 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 IFITM5A6NNB3 132 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 CTSVO60911 334 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 IL24Q13007 206 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.49□□□□□ -1.05
CHD3-202ENST00000358181 HSPB1P04792 205 aaKnown RBP8.49□□□□□ -1.05
CHD3-202ENST00000358181 PSG9Q00887 426 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 FAM169BQ8N8A8 192 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 SRSF12Q8WXF0 261 aaKnown RBP8.49□□□□□ -1.05
CHD3-202ENST00000358181 C7orf69Q9H7B7 122 aa8.49□□□□□ -1.05
CHD3-202ENST00000358181 H3BRM9 83 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 ITLN1Q8WWA0 313 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 ALG14Q96F25 216 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 Q9N2K0 584 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 ACER3Q9NUN7 267 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 TRAV8-6A0A0B4J262 113 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 ATP1A1-AS1Q5TC04 95 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 C11orf87Q6NUJ2 197 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 DTX2Q86UW9 622 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 CRIM1Q9NZV1 1036 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 PEMTQ9UBM1 199 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 SPTY2D1-AS1A0A0U1RR47 76 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 HIST1H1DP16402 221 aaKnown RBP8.48□□□□□ -1.05
CHD3-202ENST00000358181 CKS1BP61024 79 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 FABP5Q01469 135 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 SPATA45Q537H7 98 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 Q6ZNB5 142 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 LPAR3Q9UBY5 353 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 SEC11BP0C7V7 166 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 FXYD7P58549 80 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 RTN4RL2Q86UN3 420 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 MZB1Q8WU39 189 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 CHCHD5Q9BSY4 110 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 A8MWL6 223 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 LILRA1O75019 489 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 VENTXO95231 258 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 CFDP00746 253 aaPredicted RBP8.48□□□□□ -1.05
CHD3-202ENST00000358181 IGHV3-53P01767 116 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 TYMSP04818 313 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 LINC00158P58513 81 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 LINC00303Q3SY05 128 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 CLEC19AQ6UXS0 136 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 MVB12AQ96EY5 273 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 TTTY12Q9BZ98 90 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 SEMA5BQ9P283 1151 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 STARD10Q9Y365 291 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 TJP1Q07157 1748 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 SMIM19Q96E16 107 aa8.48□□□□□ -1.05
CHD3-202ENST00000358181 NUP214P35658 2090 aaPredicted RBP8.48□□□□□ -1.05
CHD3-202ENST00000358181 ANKRD20A5PA0PJZ0 165 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 TMEM210A6NLX4 147 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 RRHO14718 337 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 SIGLEC5O15389 551 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 ADAP1O75689 374 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 SIGLEC14Q08ET2 396 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 DMRTA1Q5VZB9 504 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 CLRN3Q8NCR9 226 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 ANAPC16Q96DE5 110 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 IGHV1OR15-9A0A0B4J2B8 117 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 FGF5P12034 268 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 INSL4Q14641 139 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 ATOH7Q8N100 152 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 LINC00615Q96LM1 132 aaPredicted RBP8.47□□□□□ -1.05
CHD3-202ENST00000358181 NUDT16L1Q9BRJ7 211 aaKnown RBP8.47□□□□□ -1.05
CHD3-202ENST00000358181 LAMTOR3Q9UHA4 124 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 PEX7O00628 323 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 SMIM18P0DKX4 95 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 WDR38Q5JTN6 314 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 FAM71F2Q6NXP2 309 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 OR8B12Q8NGG6 310 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 COLQQ9Y215 455 aaPredicted RBP8.47□□□□□ -1.05
CHD3-202ENST00000358181 SSC5DA1L4H1 1573 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 GPX2P18283 190 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 TNFSF10P50591 281 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 COLCA1Q6ZS62 124 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms