RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 LHFPL1Q86WI0 220 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 TMEM17Q86X19 198 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 SECTM1Q8WVN6 248 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 TOMM40LQ969M1 308 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 MOB3AQ96BX8 217 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 C5orf30Q96GV9 206 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 FXYD6Q9H0Q3 95 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 MCUBQ9NWR8 336 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 SDHAF2Q9NX18 166 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 LYRM1O43325 122 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 FAM157CP0CG43 387 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 HERV-K104P61576 105 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 TUSC1Q2TAM9 212 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 ZNF833PQ6ZTB9 187 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 NRARPQ7Z6K4 114 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 OR51S1Q8NGJ8 323 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 FAM216AQ8WUB2 273 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 RTN4IP1Q8WWV3 396 aaPredicted RBP12□□□□□ -0.49
CCNE1-202ENST00000357943 MEGF9Q9H1U4 602 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 GHITMQ9H3K2 345 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 ZNF221Q9UK13 617 aa12□□□□□ -0.49
CCNE1-202ENST00000357943 DISC1C4P0D8 188 aa11.99□□□□□ -0.49
CCNE1-202ENST00000357943 FAUP35544 74 aaKnown RBP11.99□□□□□ -0.49
CCNE1-202ENST00000357943 LINC00205P59089 165 aa11.99□□□□□ -0.49
CCNE1-202ENST00000357943 MZT2BQ6NZ67 158 aa11.99□□□□□ -0.49
CCNE1-202ENST00000357943 CCBE1Q6UXH8 406 aaPredicted RBP11.99□□□□□ -0.49
CCNE1-202ENST00000357943 TGIF2LXQ8IUE1 241 aa11.99□□□□□ -0.49
CCNE1-202ENST00000357943 DRAM1Q8N682 238 aa11.99□□□□□ -0.49
CCNE1-202ENST00000357943 ZNF645Q8N7E2 425 aa11.99□□□□□ -0.49
CCNE1-202ENST00000357943 SIGLECL1Q8N7X8 197 aa11.99□□□□□ -0.49
CCNE1-202ENST00000357943 ZBTB8BQ8NAP8 495 aaPredicted RBP11.99□□□□□ -0.49
CCNE1-202ENST00000357943 DEDD2Q8WXF8 326 aa11.99□□□□□ -0.49
CCNE1-202ENST00000357943 MRGPRFQ96AM1 343 aa11.99□□□□□ -0.49
CCNE1-202ENST00000357943 RBMXL1Q96E39 390 aaKnown RBP11.99□□□□□ -0.49
CCNE1-202ENST00000357943 CCL28Q9NRJ3 127 aa11.99□□□□□ -0.49
CCNE1-202ENST00000357943 PAIP2BQ9ULR5 123 aaKnown RBP11.99□□□□□ -0.49
CCNE1-202ENST00000357943 IGHV1-3A0A0C4DH29 117 aa11.98□□□□□ -0.49
CCNE1-202ENST00000357943 A0A1W2PPI3 338 aa11.98□□□□□ -0.49
CCNE1-202ENST00000357943 GAPDHP04406 335 aaKnown RBP11.98□□□□□ -0.49
CCNE1-202ENST00000357943 GNRHRP30968 328 aa11.98□□□□□ -0.49
CCNE1-202ENST00000357943 RAB13P51153 203 aa11.98□□□□□ -0.49
CCNE1-202ENST00000357943 ZNF816Q0VGE8 651 aaPredicted RBP11.98□□□□□ -0.49
CCNE1-202ENST00000357943 BAMBIQ13145 260 aa11.98□□□□□ -0.49
CCNE1-202ENST00000357943 ZNF818PQ6ZRF7 136 aa11.98□□□□□ -0.49
CCNE1-202ENST00000357943 OR13C8Q8NGS7 320 aa11.98□□□□□ -0.49
CCNE1-202ENST00000357943 TERB2Q8NHR7 220 aa11.98□□□□□ -0.49
CCNE1-202ENST00000357943 S1PR3Q99500 378 aa11.98□□□□□ -0.49
CCNE1-202ENST00000357943 MRPL20Q9BYC9 149 aaKnown RBP11.98□□□□□ -0.49
CCNE1-202ENST00000357943 SLC5A7Q9GZV3 580 aa11.98□□□□□ -0.49
CCNE1-202ENST00000357943 PRDM13Q9H4Q3 707 aa11.98□□□□□ -0.49
CCNE1-202ENST00000357943 GAB2Q9UQC2 676 aa11.98□□□□□ -0.49
CCNE1-202ENST00000357943 TIMM23O14925 209 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 SCGB2A2Q13296 93 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 CCDC144NLQ6NUI1 221 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 FAM71F2Q6NXP2 309 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 IDO2Q6ZQW0 420 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 ZDHHC16Q969W1 377 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 GPHA2Q96T91 129 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 SSX3Q99909 188 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 PRRT1Q99946 306 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 C7orf50Q9BRJ6 194 aaKnown RBP11.97□□□□□ -0.49
CCNE1-202ENST00000357943 SLC2A8Q9NY64 477 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 hCG_2014768A0A024R1R8 64 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 IGHV3-72A0A0B4J1Y9 119 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 OOSP1A8MZH6 123 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 M0R1X1 148 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 CT45A6P0DMU7 189 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 CT45A5P0DMU8 189 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 CT45A7P0DMV0 189 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 CD24P25063 80 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 Q6YL49 198 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 GLDNQ6ZMI3 551 aaPredicted RBP11.97□□□□□ -0.49
CCNE1-202ENST00000357943 MOB3BQ86TA1 216 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 OR8H3Q8N146 312 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.97□□□□□ -0.49
CCNE1-202ENST00000357943 DUSP18Q8NEJ0 188 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 PIFOQ8TCI5 191 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 CFHR4Q92496 578 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 NABP2Q9BQ15 211 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 SCP2D1Q9UJQ7 156 aa11.97□□□□□ -0.49
CCNE1-202ENST00000357943 CENPXA8MT69 81 aa11.96□□□□□ -0.5
CCNE1-202ENST00000357943 TXNL1O43396 289 aa11.96□□□□□ -0.5
CCNE1-202ENST00000357943 TNFSF12O43508 249 aa11.96□□□□□ -0.5
CCNE1-202ENST00000357943 SLC22A5O76082 557 aa11.96□□□□□ -0.5
CCNE1-202ENST00000357943 SLC6A1P30531 599 aa11.96□□□□□ -0.5
CCNE1-202ENST00000357943 BTCP35070 178 aa11.96□□□□□ -0.5
CCNE1-202ENST00000357943 UCP3P55916 312 aa11.96□□□□□ -0.5
CCNE1-202ENST00000357943 FBLN7Q53RD9 439 aa11.96□□□□□ -0.5
CCNE1-202ENST00000357943 ENKURQ8TC29 256 aa11.96□□□□□ -0.5
CCNE1-202ENST00000357943 MARCH1Q8TCQ1 289 aa11.96□□□□□ -0.5
CCNE1-202ENST00000357943 FAM240BA0A1B0GVZ2 78 aa11.95□□□□□ -0.5
CCNE1-202ENST00000357943 LINC00473A8K010 186 aa11.95□□□□□ -0.5
CCNE1-202ENST00000357943 HOXA3O43365 443 aaPredicted RBP11.95□□□□□ -0.5
CCNE1-202ENST00000357943 IGHV4-59P01825 116 aa11.95□□□□□ -0.5
CCNE1-202ENST00000357943 PI3P19957 117 aa11.95□□□□□ -0.5
CCNE1-202ENST00000357943 DUTP33316 252 aaKnown RBP11.95□□□□□ -0.5
CCNE1-202ENST00000357943 IER3P46695 156 aa11.95□□□□□ -0.5
CCNE1-202ENST00000357943 CCR6P51684 374 aa11.95□□□□□ -0.5
CCNE1-202ENST00000357943 EIF4EBP1Q13541 118 aaPredicted RBP11.95□□□□□ -0.5
CCNE1-202ENST00000357943 HABP2Q14520 560 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms