RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 HES3Q5TGS1 186 aa17.21■□□□□ 0.35
COL13A1-202ENST00000357811 SP5Q6BEB4 398 aaPredicted RBP17.21■□□□□ 0.35
COL13A1-202ENST00000357811 LINC00596Q86U02 117 aa17.21■□□□□ 0.35
COL13A1-202ENST00000357811 GTF3AQ92664 365 aaKnown RBP17.21■□□□□ 0.35
COL13A1-202ENST00000357811 RPUSD4Q96CM3 377 aaKnown RBP17.21■□□□□ 0.35
COL13A1-202ENST00000357811 C5orf30Q96GV9 206 aa17.21■□□□□ 0.35
COL13A1-202ENST00000357811 MAP1LC3BQ9GZQ8 125 aa17.21■□□□□ 0.35
COL13A1-202ENST00000357811 FAM234AQ9H0X4 552 aa17.21■□□□□ 0.35
COL13A1-202ENST00000357811 SMDT1Q9H4I9 107 aa17.21■□□□□ 0.35
COL13A1-202ENST00000357811 KMT2EQ8IZD2 1858 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 TRBV6-6A0A0A6YYG2 114 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 CXorf65A6NEN9 183 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 C12orf77C9JDV5 145 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 CD59P13987 128 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 SSTR5P35346 364 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 Q6ZR03 302 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 ZNF610Q8N9Z0 462 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 MDS2Q8NDY4 140 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 OR5T1Q8NG75 326 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 OPA3Q9H6K4 179 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 LRP5LA4QPB2 252 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 HIST1H2BKO60814 126 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 S1PR2O95136 353 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 HIST1H2BJP06899 126 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 HIST1H2BOP23527 126 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 HIST1H2BBP33778 126 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 HIST1H2BDP58876 126 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 HIST1H2BCP62807 126 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 HBG1P69891 147 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 HBG2P69892 147 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 HIST2H2BEQ16778 126 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.2■□□□□ 0.34
COL13A1-202ENST00000357811 HIST1H2BHQ93079 126 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 LHX4Q969G2 390 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 MALSU1Q96EH3 234 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 TRIB1Q96RU8 372 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 HIST1H2BNQ99877 126 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 HIST1H2BMQ99879 126 aa17.2■□□□□ 0.34
COL13A1-202ENST00000357811 COL27A1Q8IZC6 1860 aaPredicted RBP17.2■□□□□ 0.34
COL13A1-202ENST00000357811 C21orf140B9A014 251 aa17.19■□□□□ 0.34
COL13A1-202ENST00000357811 NDUFB7P17568 137 aa17.19■□□□□ 0.34
COL13A1-202ENST00000357811 S100A2P29034 98 aa17.19■□□□□ 0.34
COL13A1-202ENST00000357811 GLIPR1P48060 266 aa17.19■□□□□ 0.34
COL13A1-202ENST00000357811 WDR25Q64LD2 544 aaPredicted RBP17.19■□□□□ 0.34
COL13A1-202ENST00000357811 GPR61Q9BZJ8 451 aa17.19■□□□□ 0.34
COL13A1-202ENST00000357811 POLDIP2Q9Y2S7 368 aa17.19■□□□□ 0.34
COL13A1-202ENST00000357811 C17orf98A8MV24 154 aa17.19■□□□□ 0.34
COL13A1-202ENST00000357811 TUBG1P23258 451 aa17.19■□□□□ 0.34
COL13A1-202ENST00000357811 ADIRFQ15847 76 aa17.19■□□□□ 0.34
COL13A1-202ENST00000357811 RPP25LQ8N5L8 163 aaKnown RBP17.19■□□□□ 0.34
COL13A1-202ENST00000357811 OR8G5Q8NG78 346 aa17.19■□□□□ 0.34
COL13A1-202ENST00000357811 C14orf144Q96I85 54 aa17.19■□□□□ 0.34
COL13A1-202ENST00000357811 WDR61Q9GZS3 305 aaKnown RBP17.19■□□□□ 0.34
COL13A1-202ENST00000357811 OR5H1A6NKK0 313 aa17.19■□□□□ 0.34
COL13A1-202ENST00000357811 PGA5P0DJD9 388 aa17.19■□□□□ 0.34
COL13A1-202ENST00000357811 EDDM3AQ14507 147 aa17.19■□□□□ 0.34
COL13A1-202ENST00000357811 KLF14Q8TD94 323 aaPredicted RBP17.19■□□□□ 0.34
COL13A1-202ENST00000357811 SLC39A9Q9NUM3 307 aa17.19■□□□□ 0.34
COL13A1-202ENST00000357811 RIF1Q5UIP0 2472 aaKnown RBP17.19■□□□□ 0.34
COL13A1-202ENST00000357811 CDX4O14627 284 aaPredicted RBP17.18■□□□□ 0.34
COL13A1-202ENST00000357811 ZG16O60844 167 aa17.18■□□□□ 0.34
COL13A1-202ENST00000357811 ERVK11-1P61568 191 aa17.18■□□□□ 0.34
COL13A1-202ENST00000357811 LRRC75BQ2VPJ9 315 aa17.18■□□□□ 0.34
COL13A1-202ENST00000357811 SNIP1Q8TAD8 396 aaKnown RBP17.18■□□□□ 0.34
COL13A1-202ENST00000357811 LSM10Q969L4 123 aaKnown RBP17.18■□□□□ 0.34
COL13A1-202ENST00000357811 KCNIP1Q9NZI2 227 aa17.18■□□□□ 0.34
COL13A1-202ENST00000357811 DBX2Q6ZNG2 339 aa17.18■□□□□ 0.34
COL13A1-202ENST00000357811 OR10D4PQ8NGN7 298 aa17.18■□□□□ 0.34
COL13A1-202ENST00000357811 CA5BP1Q8WTZ4 195 aa17.18■□□□□ 0.34
COL13A1-202ENST00000357811 TAF15Q92804 592 aaKnown RBP eCLIP17.18■□□□□ 0.34
COL13A1-202ENST00000357811 MLNRO43193 412 aa17.17■□□□□ 0.34
COL13A1-202ENST00000357811 ZNF737O75373 536 aa17.17■□□□□ 0.34
COL13A1-202ENST00000357811 HBZP02008 142 aa17.17■□□□□ 0.34
COL13A1-202ENST00000357811 CCL11P51671 97 aa17.17■□□□□ 0.34
COL13A1-202ENST00000357811 SOX8P57073 446 aa17.17■□□□□ 0.34
COL13A1-202ENST00000357811 TNFRSF9Q07011 255 aa17.17■□□□□ 0.34
COL13A1-202ENST00000357811 ACSM6Q6P461 480 aa17.17■□□□□ 0.34
COL13A1-202ENST00000357811 GALMQ96C23 342 aa17.17■□□□□ 0.34
COL13A1-202ENST00000357811 FAM210BQ96KR6 192 aa17.17■□□□□ 0.34
COL13A1-202ENST00000357811 PRO1933Q9H354 126 aa17.17■□□□□ 0.34
COL13A1-202ENST00000357811 MRPL49Q13405 166 aaKnown RBP17.17■□□□□ 0.34
COL13A1-202ENST00000357811 SLC35E3Q7Z769 313 aa17.17■□□□□ 0.34
COL13A1-202ENST00000357811 FRZBQ92765 325 aa17.17■□□□□ 0.34
COL13A1-202ENST00000357811 PLCE1Q9P212 2302 aa17.17■□□□□ 0.34
COL13A1-202ENST00000357811 ODAMA1E959 279 aa17.16■□□□□ 0.34
COL13A1-202ENST00000357811 SOD3P08294 240 aa17.16■□□□□ 0.34
COL13A1-202ENST00000357811 RAC2P15153 192 aa17.16■□□□□ 0.34
COL13A1-202ENST00000357811 TFF3Q07654 80 aa17.16■□□□□ 0.34
COL13A1-202ENST00000357811 RTP5Q14D33 572 aa17.16■□□□□ 0.34
COL13A1-202ENST00000357811 HOXA5P20719 270 aa17.16■□□□□ 0.34
COL13A1-202ENST00000357811 AURKAIP1Q9NWT8 199 aaPredicted RBP17.16■□□□□ 0.34
COL13A1-202ENST00000357811 VWA1Q6PCB0 445 aa17.16■□□□□ 0.34
COL13A1-202ENST00000357811 FER1L6-AS2Q96M78 137 aa17.16■□□□□ 0.34
COL13A1-202ENST00000357811 PTBP3O95758 552 aaKnown RBP17.15■□□□□ 0.34
COL13A1-202ENST00000357811 TRGC1P0CF51 173 aa17.15■□□□□ 0.34
COL13A1-202ENST00000357811 SSX2Q16385 188 aa17.15■□□□□ 0.34
COL13A1-202ENST00000357811 ABHD5Q8WTS1 349 aa17.15■□□□□ 0.34
COL13A1-202ENST00000357811 NINJ1Q92982 152 aa17.15■□□□□ 0.34
COL13A1-202ENST00000357811 SMIM7Q9BQ49 75 aa17.15■□□□□ 0.34
COL13A1-202ENST00000357811 MBNL3Q9NUK0 354 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms