RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 C11orf94C9JXX5 98 aa10.78□□□□□ -0.68
BDNF-202ENST00000356660 F2RP25116 425 aa10.78□□□□□ -0.68
BDNF-202ENST00000356660 CTSSP25774 331 aa10.78□□□□□ -0.68
BDNF-202ENST00000356660 WNT5AP41221 380 aa10.78□□□□□ -0.68
BDNF-202ENST00000356660 PRDX4Q13162 271 aa10.78□□□□□ -0.68
BDNF-202ENST00000356660 NUDT10Q8NFP7 164 aa10.78□□□□□ -0.68
BDNF-202ENST00000356660 SNHG12Q9BXW3 62 aa10.78□□□□□ -0.68
BDNF-202ENST00000356660 PARLQ9H300 379 aa10.78□□□□□ -0.68
BDNF-202ENST00000356660 IL19Q9UHD0 177 aa10.78□□□□□ -0.68
BDNF-202ENST00000356660 FAM208BQ5VWN6 2430 aa10.78□□□□□ -0.68
BDNF-202ENST00000356660 RAB29O14966 203 aa10.78□□□□□ -0.68
BDNF-202ENST00000356660 LYZL6O75951 148 aa10.78□□□□□ -0.68
BDNF-202ENST00000356660 GZMBP10144 247 aa10.78□□□□□ -0.68
BDNF-202ENST00000356660 CCKARP32238 428 aa10.78□□□□□ -0.68
BDNF-202ENST00000356660 C1orf210Q8IVY1 113 aa10.78□□□□□ -0.68
BDNF-202ENST00000356660 SIGLECL1Q8N7X8 197 aa10.78□□□□□ -0.68
BDNF-202ENST00000356660 SGMS2Q8NHU3 365 aa10.78□□□□□ -0.68
BDNF-202ENST00000356660 NAGKQ9UJ70 344 aa10.78□□□□□ -0.68
BDNF-202ENST00000356660 CHD7Q9P2D1 2997 aa10.78□□□□□ -0.68
BDNF-202ENST00000356660 KIAA1324LA8MWY0 1029 aaPredicted RBP10.77□□□□□ -0.68
BDNF-202ENST00000356660 TRA2AQ13595 282 aaKnown RBP eCLIP10.77□□□□□ -0.68
BDNF-202ENST00000356660 PHYHD1Q5SRE7 291 aa10.77□□□□□ -0.68
BDNF-202ENST00000356660 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.77□□□□□ -0.68
BDNF-202ENST00000356660 CALHM1Q8IU99 346 aa10.77□□□□□ -0.68
BDNF-202ENST00000356660 OR2Y1Q8NGV0 311 aa10.77□□□□□ -0.68
BDNF-202ENST00000356660 PCED1AQ9H1Q7 454 aa10.77□□□□□ -0.68
BDNF-202ENST00000356660 PRDM6Q9NQX0 595 aa10.77□□□□□ -0.68
BDNF-202ENST00000356660 CISD1Q9NZ45 108 aaKnown RBP10.77□□□□□ -0.68
BDNF-202ENST00000356660 KIAA1549LQ6ZVL6 1849 aa10.77□□□□□ -0.69
BDNF-202ENST00000356660 IGKV1D-13A0A0B4J2D9 117 aa10.77□□□□□ -0.69
BDNF-202ENST00000356660 C17orf112F2Z3M2 114 aa10.77□□□□□ -0.69
BDNF-202ENST00000356660 GDF9O60383 454 aa10.77□□□□□ -0.69
BDNF-202ENST00000356660 HRASP01112 189 aa10.77□□□□□ -0.69
BDNF-202ENST00000356660 OR4A8P0C604 315 aa10.77□□□□□ -0.69
BDNF-202ENST00000356660 IGKV1-13P0DP09 117 aa10.77□□□□□ -0.69
BDNF-202ENST00000356660 TPPP2P59282 170 aa10.77□□□□□ -0.69
BDNF-202ENST00000356660 OR4D5Q8NGN0 318 aa10.77□□□□□ -0.69
BDNF-202ENST00000356660 RTL8AQ9BWD3 113 aa10.77□□□□□ -0.69
BDNF-202ENST00000356660 FGF5P12034 268 aa10.77□□□□□ -0.69
BDNF-202ENST00000356660 THBS3P49746 956 aa10.77□□□□□ -0.69
BDNF-202ENST00000356660 HNRNPA3P51991 378 aaKnown RBP10.77□□□□□ -0.69
BDNF-202ENST00000356660 OR4A16Q8NH70 328 aa10.77□□□□□ -0.69
BDNF-202ENST00000356660 KCNE4Q8WWG9 221 aa10.77□□□□□ -0.69
BDNF-202ENST00000356660 TMEM9BQ9NQ34 198 aa10.77□□□□□ -0.69
BDNF-202ENST00000356660 EML5Q05BV3 1969 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 SPINT2O43291 252 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 PGLYRP1O75594 196 aaPredicted RBP10.76□□□□□ -0.69
BDNF-202ENST00000356660 SCGB2A2Q13296 93 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 H2BFWTQ7Z2G1 175 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 ZNF573Q86YE8 665 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 SCCPDHQ8NBX0 429 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 BEND2Q8NDZ0 799 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 OR5R1Q8NH85 324 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 R3HDM4Q96D70 268 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 IL36RNQ9UBH0 155 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 TRGV5A0A0B4J1U4 118 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 RPL36A-HNRNPH2H7BZ11 118 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 OR10J1P30954 320 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 LIN7CQ9NUP9 197 aaKnown RBP10.76□□□□□ -0.69
BDNF-202ENST00000356660 CLN8Q9UBY8 286 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 TCFL5Q9UL49 500 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 SZT2Q5T011 3432 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 RNF212BA8MTL3 300 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 DEFB108AA8MXU0 73 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 MT-CO3P00414 261 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 DEFA4P12838 97 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 CEACAM6P40199 344 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 ERVFC1-1P60608 527 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 PRAMEF5Q5TYX0 476 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 PRAMEF6Q5VXH4 476 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 NUFIP2Q7Z417 695 aaKnown RBP10.76□□□□□ -0.69
BDNF-202ENST00000356660 LYPD6Q86Y78 171 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 ZADH2Q8N4Q0 377 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 HSPB9Q9BQS6 159 aa10.76□□□□□ -0.69
BDNF-202ENST00000356660 IGKV1-12A0A0C4DH73 117 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 A0A0J9YW62 118 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 FCN1O00602 326 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 CA11O75493 328 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 TIAF1O95411 115 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 IGKV1D-12P01611 117 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 MGST1P10620 155 aaKnown RBP10.75□□□□□ -0.69
BDNF-202ENST00000356660 CRISP2P16562 243 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 ACACBO00763 2458 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 NPIPB13A6NJU9 1138 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 NPIPB4C9JG80 1138 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 LINC00614P0C842 121 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 TFPI2P48307 235 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 RAC3P60763 192 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 SUMO1P63165 101 aaKnown RBP10.75□□□□□ -0.69
BDNF-202ENST00000356660 PSG4Q00888 419 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 WDR74Q6RFH5 385 aaPredicted RBP10.75□□□□□ -0.69
BDNF-202ENST00000356660 BTNL3Q6UXE8 466 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 UHRF2Q96PU4 802 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 ZNF586Q9NXT0 402 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 USF3Q68DE3 2245 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 SH2D1BO14796 132 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 NDUFB4O95168 129 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 TMEM183BQ1AE95 376 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 TUSC5Q8IXB3 177 aa10.75□□□□□ -0.69
BDNF-202ENST00000356660 LYPD6BQ8NI32 183 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms