RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 OR4C12Q96R67 309 aa13.37□□□□□ -0.27
RTN3-205ENST00000356000 NPVFQ9HCQ7 196 aa13.37□□□□□ -0.27
RTN3-205ENST00000356000 WNT16Q9UBV4 365 aa13.37□□□□□ -0.27
RTN3-205ENST00000356000 PLPP3O14495 311 aa13.36□□□□□ -0.27
RTN3-205ENST00000356000 FRMD6-AS1P0C7T7 363 aa13.36□□□□□ -0.27
RTN3-205ENST00000356000 HBG1P69891 147 aa13.36□□□□□ -0.27
RTN3-205ENST00000356000 HBG2P69892 147 aa13.36□□□□□ -0.27
RTN3-205ENST00000356000 SMAGPQ0VAQ4 97 aa13.36□□□□□ -0.27
RTN3-205ENST00000356000 TBR1Q16650 682 aa13.36□□□□□ -0.27
RTN3-205ENST00000356000 NINJ1Q92982 152 aa13.36□□□□□ -0.27
RTN3-205ENST00000356000 ST20Q9HBF5 79 aa13.36□□□□□ -0.27
RTN3-205ENST00000356000 NDUFB4O95168 129 aa13.36□□□□□ -0.27
RTN3-205ENST00000356000 SEC13P55735 322 aa13.36□□□□□ -0.27
RTN3-205ENST00000356000 DOK3Q7L591 496 aa13.36□□□□□ -0.27
RTN3-205ENST00000356000 CHRDL1Q9BU40 450 aa13.36□□□□□ -0.27
RTN3-205ENST00000356000 DERL1Q9BUN8 251 aa13.36□□□□□ -0.27
RTN3-205ENST00000356000 STRADBQ9C0K7 418 aa13.36□□□□□ -0.27
RTN3-205ENST00000356000 GTSF1LQ9H1H1 148 aa13.36□□□□□ -0.27
RTN3-205ENST00000356000 TP73-AS1Q9UF72 201 aa13.36□□□□□ -0.27
RTN3-205ENST00000356000 LAMA3Q16787 3333 aa13.35□□□□□ -0.27
RTN3-205ENST00000356000 MT-ND6P03923 174 aa13.35□□□□□ -0.27
RTN3-205ENST00000356000 GATA2P23769 480 aaPredicted RBP13.35□□□□□ -0.27
RTN3-205ENST00000356000 CKS1BP61024 79 aa13.35□□□□□ -0.27
RTN3-205ENST00000356000 ZC2HC1AQ96GY0 325 aa13.35□□□□□ -0.27
RTN3-205ENST00000356000 C2CD4DB7Z1M9 353 aa13.35□□□□□ -0.27
RTN3-205ENST00000356000 HNRNPA2B1P22626 353 aaKnown RBP13.35□□□□□ -0.27
RTN3-205ENST00000356000 GUCA1AP43080 201 aaPredicted RBP13.35□□□□□ -0.27
RTN3-205ENST00000356000 HLA-BQ31612 363 aa13.35□□□□□ -0.27
RTN3-205ENST00000356000 CA13Q8N1Q1 262 aa13.35□□□□□ -0.27
RTN3-205ENST00000356000 OR2V2Q96R30 315 aa13.35□□□□□ -0.27
RTN3-205ENST00000356000 C5orf64Q2M2E5 130 aa13.34□□□□□ -0.27
RTN3-205ENST00000356000 Q56UQ5 140 aa13.34□□□□□ -0.27
RTN3-205ENST00000356000 SCCPDHQ8NBX0 429 aa13.34□□□□□ -0.27
RTN3-205ENST00000356000 OR8B3Q8NGG8 313 aa13.34□□□□□ -0.27
RTN3-205ENST00000356000 OR10G9Q8NGN4 311 aa13.34□□□□□ -0.27
RTN3-205ENST00000356000 OR10G7Q8NGN6 311 aa13.34□□□□□ -0.27
RTN3-205ENST00000356000 OR8B2Q96RD0 313 aa13.34□□□□□ -0.27
RTN3-205ENST00000356000 SSBP4Q9BWG4 385 aaPredicted RBP13.34□□□□□ -0.27
RTN3-205ENST00000356000 ARHGAP21Q5T5U3 1957 aa13.34□□□□□ -0.27
RTN3-205ENST00000356000 ZNF318Q5VUA4 2279 aa13.34□□□□□ -0.27
RTN3-205ENST00000356000 TRBV20OR9-2A0A075B6H5 130 aa13.34□□□□□ -0.27
RTN3-205ENST00000356000 SLC22A20A6NK97 555 aa13.34□□□□□ -0.27
RTN3-205ENST00000356000 OR10J4P0C629 311 aa13.34□□□□□ -0.27
RTN3-205ENST00000356000 FCGR2AP12318 317 aa13.34□□□□□ -0.27
RTN3-205ENST00000356000 HLA-DOBP13765 273 aa13.34□□□□□ -0.27
RTN3-205ENST00000356000 NTF3P20783 257 aa13.34□□□□□ -0.27
RTN3-205ENST00000356000 RAC3P60763 192 aa13.34□□□□□ -0.27
RTN3-205ENST00000356000 ST6GALNAC6Q969X2 333 aa13.34□□□□□ -0.27
RTN3-205ENST00000356000 APOBEC3DQ96AK3 386 aaPredicted RBP13.34□□□□□ -0.27
RTN3-205ENST00000356000 HES4Q9HCC6 221 aa13.34□□□□□ -0.27
RTN3-205ENST00000356000 FAM231BA6NCW3 169 aa13.33□□□□□ -0.28
RTN3-205ENST00000356000 ZNF121P58317 390 aaPredicted RBP13.33□□□□□ -0.28
RTN3-205ENST00000356000 SLAQ13239 276 aa13.33□□□□□ -0.28
RTN3-205ENST00000356000 OR8I2Q8N0Y5 310 aa13.33□□□□□ -0.28
RTN3-205ENST00000356000 NAT8BQ9UHF3 227 aa13.33□□□□□ -0.28
RTN3-205ENST00000356000 NCOR1O75376 2440 aa13.33□□□□□ -0.28
RTN3-205ENST00000356000 CRYAAP02489 173 aa13.33□□□□□ -0.28
RTN3-205ENST00000356000 HNRNPA1P09651 372 aaKnown RBP eCLIP13.33□□□□□ -0.28
RTN3-205ENST00000356000 SLC25A6P12236 298 aa13.33□□□□□ -0.28
RTN3-205ENST00000356000 THBS3P49746 956 aa13.33□□□□□ -0.28
RTN3-205ENST00000356000 TRIP6Q15654 476 aaKnown RBP13.33□□□□□ -0.28
RTN3-205ENST00000356000 TMEM52BQ4KMG9 183 aa13.33□□□□□ -0.28
RTN3-205ENST00000356000 C9orf135Q5VTT2 229 aa13.33□□□□□ -0.28
RTN3-205ENST00000356000 EBLN2Q6P2I7 272 aa13.33□□□□□ -0.28
RTN3-205ENST00000356000 ZNF439Q8NDP4 499 aa13.33□□□□□ -0.28
RTN3-205ENST00000356000 KCNK17Q96T54 332 aa13.33□□□□□ -0.28
RTN3-205ENST00000356000 CCDC3Q9BQI4 270 aa13.33□□□□□ -0.28
RTN3-205ENST00000356000 QTRT1Q9BXR0 403 aaKnown RBP13.33□□□□□ -0.28
RTN3-205ENST00000356000 MBNL1Q9NR56 388 aaKnown RBP13.33□□□□□ -0.28
RTN3-205ENST00000356000 KCNIP2Q9NS61 270 aa13.33□□□□□ -0.28
RTN3-205ENST00000356000 PSENENQ9NZ42 101 aa13.33□□□□□ -0.28
RTN3-205ENST00000356000 C7orf71A4D174 169 aa13.32□□□□□ -0.28
RTN3-205ENST00000356000 PRNPP04156 253 aa13.32□□□□□ -0.28
RTN3-205ENST00000356000 CA7P43166 264 aa13.32□□□□□ -0.28
RTN3-205ENST00000356000 DCAF12Q5T6F0 453 aa13.32□□□□□ -0.28
RTN3-205ENST00000356000 KIAA0895LQ68EN5 471 aa13.32□□□□□ -0.28
RTN3-205ENST00000356000 SLC25A34Q6PIV7 304 aa13.32□□□□□ -0.28
RTN3-205ENST00000356000 C1orf122Q6ZSJ8 110 aa13.32□□□□□ -0.28
RTN3-205ENST00000356000 WDR5BQ86VZ2 330 aa13.32□□□□□ -0.28
RTN3-205ENST00000356000 OR10G3Q8NGC4 313 aa13.32□□□□□ -0.28
RTN3-205ENST00000356000 OR5D13Q8NGL4 314 aa13.32□□□□□ -0.28
RTN3-205ENST00000356000 COMMD5Q9GZQ3 224 aa13.32□□□□□ -0.28
RTN3-205ENST00000356000 IL36GQ9NZH8 169 aa13.32□□□□□ -0.28
RTN3-205ENST00000356000 A0A0G2JRQ6 117 aa13.32□□□□□ -0.28
RTN3-205ENST00000356000 UBE2L5PA0A1B0GUS4 154 aa13.32□□□□□ -0.28
RTN3-205ENST00000356000 LIPT2A6NK58 231 aa13.32□□□□□ -0.28
RTN3-205ENST00000356000 ARF3P61204 181 aaPredicted RBP13.32□□□□□ -0.28
RTN3-205ENST00000356000 ARF1P84077 181 aaKnown RBP13.32□□□□□ -0.28
RTN3-205ENST00000356000 C16orf52Q8NHV5 167 aa13.32□□□□□ -0.28
RTN3-205ENST00000356000 POM121L2Q96KW2 1035 aa13.32□□□□□ -0.28
RTN3-205ENST00000356000 BDP1A6H8Y1 2624 aa13.32□□□□□ -0.28
RTN3-205ENST00000356000 FAM181BA6NEQ2 426 aa13.31□□□□□ -0.28
RTN3-205ENST00000356000 K7EP34 96 aa13.31□□□□□ -0.28
RTN3-205ENST00000356000 SLC17A3O00476 420 aa13.31□□□□□ -0.28
RTN3-205ENST00000356000 NPY1RP25929 384 aa13.31□□□□□ -0.28
RTN3-205ENST00000356000 NTSR1P30989 418 aa13.31□□□□□ -0.28
RTN3-205ENST00000356000 ATP5G3P48201 142 aa13.31□□□□□ -0.28
RTN3-205ENST00000356000 RPS18P62269 152 aaKnown RBP13.31□□□□□ -0.28
RTN3-205ENST00000356000 MYBPHQ13203 477 aa13.31□□□□□ -0.28
RTN3-205ENST00000356000 KIAA1644Q3SXP7 199 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms