RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CEP152O94986 1710 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 NCOR2Q9Y618 2525 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 PRXQ9BXM0 1461 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 C5orf58C9J3I9 102 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 M0QZ92 97 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 FABP7O15540 132 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 PDCD6O75340 191 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 RBBP9O75884 186 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 IFNA7P01567 189 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 IFNA14P01570 189 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 HLA-DQB1P01920 261 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 APCSP02743 223 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 ADRA2AP08913 450 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 INAFM2P0DMQ5 153 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 OMGP23515 440 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 RPS9P46781 194 aaKnown RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 NUDT2P50583 147 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 TCL1AP56279 114 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 GNG2P59768 71 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 HBG1P69891 147 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 HBG2P69892 147 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF404Q494X3 552 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 LUZP6Q538Z0 58 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 PYDC2Q56P42 97 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 FAM78AQ5JUQ0 283 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 ZIC4Q8N9L1 334 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 OR5D18Q8NGL1 313 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 OR5J2Q8NH18 312 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 SLC37A2Q8TED4 501 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 MAFIPQ8WZ33 124 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 PACRGQ96M98 296 aaPredicted RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 NRTNQ99748 197 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 SUCNR1Q9BXA5 334 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF717Q9BY31 904 aaPredicted RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 PLA2G12AQ9BZM1 189 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 TPK1Q9H3S4 243 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 PSTPIP2Q9H939 334 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 FBXO6Q9NRD1 293 aaPredicted RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 CMTM6Q9NX76 183 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 PRO0628Q9UI54 55 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 AHNAKQ09666 5890 aaKnown RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 POLQO75417 2590 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 A0A096LNJ9 63 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 IGHV3-66A0A0C4DH42 116 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 OR2AT4A6NND4 320 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 KLLNB2CW77 178 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 E5RI56 91 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 G3V2T6 193 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 ISLRO14498 428 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 MAGEB4O15481 346 aaPredicted RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 SLC22A5O76082 557 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 SERPINA1P01009 418 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 IFI30P13284 250 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 MAGEA12P43365 314 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 SULT1A2P50226 295 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 CDK9P50750 372 aaKnown RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 HERVK_113P61574 105 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 SKP2Q13309 424 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 HSD17B12Q53GQ0 312 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 ZFP1Q6P2D0 407 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 FAM231DQ6ZW35 169 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 CAMK2N1Q7Z7J9 78 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 PRSS58Q8IYP2 241 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 C4orf33Q8N1A6 199 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 YIPF7Q8N8F6 280 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 OR4C6Q8NH72 309 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 OR5AK3PQ8NH89 298 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 TEX47Q8TBZ9 253 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 HAVCR2Q8TDQ0 301 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 MAL2Q969L2 176 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 PTH2Q96A98 100 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 ANKRD9Q96BM1 317 aaPredicted RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 ZHX1-C8orf76Q96EF9 292 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 DERL2Q9GZP9 239 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 ARL6Q9H0F7 186 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 MAP1LC3AQ9H492 121 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 DNAJC27Q9NZQ0 273 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 MIA3Q5JRA6 1907 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 AGRNO00468 2067 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 LRRK2Q5S007 2527 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 CRYBG3Q68DQ2 2970 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 BTAF1O14981 1849 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 COL11A1P12107 1806 aaPredicted RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 DAPL1A0PJW8 107 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 H0YJX3 145 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 AIPO00170 330 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 CXCR6O00574 342 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 ENTPD6O75354 484 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 CA2P00918 260 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 PRB1P04280 392 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 SERPINA6P08185 405 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 TSPAN19P0C672 248 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 HTR1DP28221 377 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 RPL35P42766 123 aaKnown RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 NKX2-5P52952 324 aaPredicted RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 CEBPGP53567 150 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 CCL23P55773 120 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 RAB5BP61020 215 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 LSM6P62312 80 aaKnown RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 RHEBQ15382 184 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms