RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 VSIRQ9H7M9 311 aa7.24□□□□□ -1.25
TRIM55-204ENST00000353317 RPRMQ9NS64 109 aa7.24□□□□□ -1.25
TRIM55-204ENST00000353317 PKDREJQ9NTG1 2253 aa7.24□□□□□ -1.25
TRIM55-204ENST00000353317 TRAV1-1A0A0B4J248 108 aa7.24□□□□□ -1.25
TRIM55-204ENST00000353317 KIR2DS1A0A191URI9 304 aa7.24□□□□□ -1.25
TRIM55-204ENST00000353317 ZFP92A6NM28 416 aa7.24□□□□□ -1.25
TRIM55-204ENST00000353317 SEC14L6B5MCN3 397 aa7.24□□□□□ -1.25
TRIM55-204ENST00000353317 IGKV3-15P01624 115 aa7.24□□□□□ -1.25
TRIM55-204ENST00000353317 TRGC1P0CF51 173 aa7.24□□□□□ -1.25
TRIM55-204ENST00000353317 F2RP25116 425 aa7.24□□□□□ -1.25
TRIM55-204ENST00000353317 CCKARP32238 428 aa7.24□□□□□ -1.25
TRIM55-204ENST00000353317 KIR2DS4P43632 304 aa7.24□□□□□ -1.25
TRIM55-204ENST00000353317 KIR2DS1Q14954 304 aa7.24□□□□□ -1.25
TRIM55-204ENST00000353317 HIST3H2BBQ8N257 126 aa7.24□□□□□ -1.25
TRIM55-204ENST00000353317 OR51H1Q8NH63 302 aa7.24□□□□□ -1.25
TRIM55-204ENST00000353317 FRZBQ92765 325 aa7.24□□□□□ -1.25
TRIM55-204ENST00000353317 IL22RA2Q969J5 263 aa7.24□□□□□ -1.25
TRIM55-204ENST00000353317 S100PBPQ96BU1 408 aa7.24□□□□□ -1.25
TRIM55-204ENST00000353317 ZNF665Q9H7R5 613 aa7.24□□□□□ -1.25
TRIM55-204ENST00000353317 A8MXE2 369 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 PPP1R2P9O14990 202 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 PSG2P11465 335 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 NKX6-1P78426 367 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-204ENST00000353317 TGFBR3Q03167 851 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 PLP2Q04941 152 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 ZNF726P1Q15940 193 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 MSMPQ1L6U9 139 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 ALKBH2Q6NS38 261 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 SLC25A24Q6NUK1 477 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 ZNF600Q6ZNG1 722 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 BHLHA15Q7RTS1 189 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-204ENST00000353317 SSX7Q7RTT5 188 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 H1FOOQ8IZA3 346 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-204ENST00000353317 OR10G4Q8NGN3 311 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 APOBEC3DQ96AK3 386 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-204ENST00000353317 FAM210BQ96KR6 192 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 SLC25A15Q9Y619 301 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 IGHV1-18A0A0C4DH31 117 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 A0A1B0GU03 582 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 B4DEV8 164 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 PRRG2O14669 202 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 SYNGR1O43759 233 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 SMPD2O60906 423 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 DFFBO76075 338 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 LY86O95711 162 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 CECR9P0C854 216 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 APLNRP35414 380 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 GPX4P36969 197 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-204ENST00000353317 FGF8P55075 233 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-204ENST00000353317 UBE2NP61088 152 aaKnown RBP7.23□□□□□ -1.25
TRIM55-204ENST00000353317 ARL16Q0P5N6 197 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 CDSNQ15517 529 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 CEACAM21Q3KPI0 293 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 C4orf17Q53FE4 359 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 OR2T2Q6IF00 324 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 LCN15Q6UWW0 184 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 C17orf78Q8N4C9 275 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 OR13D1Q8NGV5 346 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 MRPL30Q8TCC3 161 aaKnown RBP7.23□□□□□ -1.25
TRIM55-204ENST00000353317 OR2J1Q9GZK6 312 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 OPA3Q9H6K4 179 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 ABCA4P78363 2273 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 EPG5Q9HCE0 2579 aa7.23□□□□□ -1.25
TRIM55-204ENST00000353317 OR5H1A6NKK0 313 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 HS3ST1O14792 307 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 PHOX2AO14813 284 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 IFNA5P01569 189 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 CTXN2P0C2S0 81 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 BCL2P10415 239 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 HIST1H1BP16401 226 aaKnown RBP7.22□□□□□ -1.25
TRIM55-204ENST00000353317 BEND4Q6ZU67 534 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 ZDHHC23Q8IYP9 409 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 SAXO1Q8IYX7 474 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 ZNF488Q96MN9 340 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 SSX3Q99909 188 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 CISD1Q9NZ45 108 aaKnown RBP7.22□□□□□ -1.25
TRIM55-204ENST00000353317 OR14J1Q9UGF5 321 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 ERRFI1Q9UJM3 462 aaPredicted RBP7.22□□□□□ -1.25
TRIM55-204ENST00000353317 OR2W1Q9Y3N9 320 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 CACNA1DQ01668 2161 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 HRNRQ86YZ3 2850 aaPredicted RBP7.22□□□□□ -1.25
TRIM55-204ENST00000353317 TRAPPC2LH3BP13 241 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 CLDN34H7C241 214 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 IGKV1-39P01597 117 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 IGLV1-44P01699 117 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 IGKV1D-39P04432 117 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 SERPINE2P07093 398 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 METTL15P1P0C7V9 234 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 MPV17P39210 176 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 RND2P52198 227 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 HOXA4Q00056 320 aaPredicted RBP7.22□□□□□ -1.25
TRIM55-204ENST00000353317 KLRB1Q12918 225 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 P2RY6Q15077 328 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 ZNF787Q6DD87 383 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 C1orf87Q8N0U7 546 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 CA5BP1Q8WTZ4 195 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 RDH5Q92781 318 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 RHOVQ96L33 236 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 RAB40CQ96S21 281 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 TMEM242Q9NWH2 141 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms