RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 EIF4E3Q8N5X7 224 aaKnown RBP6.8□□□□□ -1.32
CD44-205ENST00000352818 SLC35G3Q8N808 338 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 ZBTB34Q8NCN2 500 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 OR2Z1Q8NG97 314 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 ANGPTL6Q8NI99 470 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 LHFPL5Q8TAF8 219 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 Q8TCH9 128 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 LRRC29Q8WV35 223 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 RBPMSQ93062 196 aaKnown RBP6.8□□□□□ -1.32
CD44-205ENST00000352818 ERGIC1Q969X5 290 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 COQ2Q96H96 371 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 DNTTIP1Q9H147 329 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 MSL2Q9HCI7 577 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 KCNIP1Q9NZI2 227 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 GSKIPQ9P0R6 139 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 FZR1Q9UM11 496 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 NSG2Q9Y328 171 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 UBE2J1Q9Y385 318 aaPredicted RBP6.8□□□□□ -1.32
CD44-205ENST00000352818 RNF115Q9Y4L5 304 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 POMT1Q9Y6A1 747 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 MFSD2BA6NFX1 497 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 MSGN1A6NI15 193 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 ATP6V1G2-DDX39BF2Z307 99 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 TRIM77I1YAP6 450 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 ZNF737O75373 536 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 LHBP01229 141 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 MBPP02686 304 aaPredicted RBP6.79□□□□□ -1.32
CD44-205ENST00000352818 HKR1P10072 659 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 MMP9P14780 707 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 VDAC1P21796 283 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 SP6Q3SY56 376 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 NMSQ5H8A3 153 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 GPR157Q5UAW9 335 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 TMEM268Q5VZI3 342 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 HSD17B13Q7Z5P4 300 aaPredicted RBP6.79□□□□□ -1.32
CD44-205ENST00000352818 LRP11Q86VZ4 500 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 BAP18Q8IXM2 172 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 SELENOHQ8IZQ5 122 aaKnown RBP6.79□□□□□ -1.32
CD44-205ENST00000352818 PPP1R35Q8TAP8 253 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 DIRC2Q96SL1 478 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 C11orf1Q9H5F2 150 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 UNKLQ9H9P5 680 aaKnown RBP6.79□□□□□ -1.32
CD44-205ENST00000352818 TAF9BQ9HBM6 251 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 CCL28Q9NRJ3 127 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 FAM212BQ9NTI7 297 aaPredicted RBP6.79□□□□□ -1.32
CD44-205ENST00000352818 LIN7CQ9NUP9 197 aaKnown RBP6.79□□□□□ -1.32
CD44-205ENST00000352818 OR1A1Q9P1Q5 309 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 OR14J1Q9UGF5 321 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 IL19Q9UHD0 177 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 PFDN2Q9UHV9 154 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 ZDHHC8Q9ULC8 765 aa6.79□□□□□ -1.32
CD44-205ENST00000352818 C12orf77C9JDV5 145 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 C3orf80F5H4A9 247 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 HSD17B6O14756 317 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 ST8SIA3O43173 380 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 FGF16O43320 207 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 GPR137BO60478 399 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 IGLV2-14P01704 120 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 PRB2P02812 416 aaPredicted RBP6.78□□□□□ -1.32
CD44-205ENST00000352818 CD55P08174 381 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 TNFSF4P23510 183 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 RPL12P30050 165 aaKnown RBP6.78□□□□□ -1.32
CD44-205ENST00000352818 IL2RGP31785 369 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 PRDX2P32119 198 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 P2RY1P47900 373 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 HTD2P86397 168 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 COL10A1Q03692 680 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 AANATQ16613 207 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 TOR2AQ5JU69 321 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 NCMAPQ5T1S8 102 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 C5orf24Q7Z6I8 188 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 ZNF695Q8IW36 515 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 GCSAMQ8N6F7 178 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 ZNF645Q8N7E2 425 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 TCTEX1D1Q8N7M0 179 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 LSM10Q969L4 123 aaKnown RBP6.78□□□□□ -1.32
CD44-205ENST00000352818 SNX22Q96L94 193 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 CXorf58Q96LI9 332 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 OR2V2Q96R30 315 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 CITED4Q96RK1 184 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 MRPL37Q9BZE1 423 aaKnown RBP6.78□□□□□ -1.32
CD44-205ENST00000352818 UFSP2Q9NUQ7 469 aa6.78□□□□□ -1.32
CD44-205ENST00000352818 LYSTQ99698 3801 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 PLCE1Q9P212 2302 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 IGKV1D-17A0A075B6S4 117 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 A0A1B0GU03 582 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 A8MXK9 166 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 NUDT19A8MXV4 375 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 MGST3O14880 152 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 HSPA12AO43301 675 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 IGHV1-46P01743 117 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 FGF2P09038 288 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 PSG2P11465 335 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 CEACAM6P40199 344 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 GABRA2P47869 451 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 CEBPDP49716 269 aaPredicted RBP6.77□□□□□ -1.33
CD44-205ENST00000352818 P2RX3P56373 397 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 EIF4EBP1Q13541 118 aaPredicted RBP6.77□□□□□ -1.33
CD44-205ENST00000352818 KRBOX4Q5JUW0 171 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 THOC7Q6I9Y2 204 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms