RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 LRP11Q86VZ4 500 aa11.65□□□□□ -0.54
SMC6-201ENST00000351948 GCSAMQ8N6F7 178 aa11.65□□□□□ -0.54
SMC6-201ENST00000351948 OR4F17Q8NGA8 305 aa11.65□□□□□ -0.54
SMC6-201ENST00000351948 OR5B3Q8NH48 314 aa11.65□□□□□ -0.54
SMC6-201ENST00000351948 EAF1Q96JC9 268 aaPredicted RBP11.65□□□□□ -0.54
SMC6-201ENST00000351948 OR51I2Q9H344 312 aa11.65□□□□□ -0.54
SMC6-201ENST00000351948 J3KRW8 73 aa11.65□□□□□ -0.55
SMC6-201ENST00000351948 MFNGO00587 321 aa11.65□□□□□ -0.55
SMC6-201ENST00000351948 EIF3GO75821 320 aaKnown RBP eCLIP11.65□□□□□ -0.55
SMC6-201ENST00000351948 CDS2O95674 445 aa11.65□□□□□ -0.55
SMC6-201ENST00000351948 RUNX1Q01196 453 aa11.65□□□□□ -0.55
SMC6-201ENST00000351948 ANKRD55Q3KP44 614 aa11.65□□□□□ -0.55
SMC6-201ENST00000351948 CCDC144NLQ6NUI1 221 aa11.65□□□□□ -0.55
SMC6-201ENST00000351948 OVCH2Q7RTZ1 564 aa11.65□□□□□ -0.55
SMC6-201ENST00000351948 ZBTB34Q8NCN2 500 aa11.65□□□□□ -0.55
SMC6-201ENST00000351948 C2CD4CQ8TF44 421 aa11.65□□□□□ -0.55
SMC6-201ENST00000351948 OR5AC2Q9NZP5 309 aa11.65□□□□□ -0.55
SMC6-201ENST00000351948 METTL1Q9UBP6 276 aaKnown RBP11.65□□□□□ -0.55
SMC6-201ENST00000351948 FOXD3Q9UJU5 478 aaPredicted RBP11.65□□□□□ -0.55
SMC6-201ENST00000351948 HSF4Q9ULV5 492 aa11.65□□□□□ -0.55
SMC6-201ENST00000351948 IGKV1-9A0A0C4DH69 117 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 RNASEK-C17orf49H0YIS7 233 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 CNN1P51911 297 aaKnown RBP11.64□□□□□ -0.55
SMC6-201ENST00000351948 PJVKQ0ZLH3 352 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 RPL39P5Q59GN2 51 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 ZNF818PQ6ZRF7 136 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 OR1L4Q8NGR5 311 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 CHAC2Q8WUX2 184 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 AAMDCQ9H7C9 122 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 IGHV1-18A0A0C4DH31 117 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 C5orf63A6NC05 138 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 PROB1E7EW31 1015 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 GNLYP22749 145 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 P2RY1P47900 373 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 ZNF788Q6ZQV5 615 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 C5orf66Q9H5L9 145 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 PPP5D1E7EU14 171 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 HPRT1P00492 218 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 SFTA3P0C7M3 94 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 P2RY4P51582 365 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 NHLH1Q02575 133 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 LGALSLQ3ZCW2 172 aaPredicted RBP11.64□□□□□ -0.55
SMC6-201ENST00000351948 RNASE6Q93091 150 aaKnown RBP11.64□□□□□ -0.55
SMC6-201ENST00000351948 WSB1Q9Y6I7 421 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 A0A1B0GU03 582 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 UBE2L3P68036 154 aaKnown RBP11.64□□□□□ -0.55
SMC6-201ENST00000351948 FGFRL1Q8N441 504 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 ATP5SQ99766 215 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 ABCA1O95477 2261 aa11.64□□□□□ -0.55
SMC6-201ENST00000351948 FAM90A10PA6NDY2 464 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 FAM90A18PA6NE21 464 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 FAM90A16PA6NEW6 464 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 FAM90A20PA6NIJ5 464 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 FAM90A8PA6NJQ4 464 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 FAM90A7PA6NKC0 464 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 FAM90A22PA8MWA6 464 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 FAM90A12PA8MX19 464 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 FAM90A5PA8MXJ8 464 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 FAM90A23PA8MXZ1 464 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 REG1AP05451 166 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 FAM90A15PP0C7V4 464 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 FAM90A13PP0C7W8 464 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 FAM90A14PP0C7W9 464 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 FAM90A24PP0C7X0 464 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 SSX7Q7RTT5 188 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 SAXO1Q8IYX7 474 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 ZNF645Q8N7E2 425 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 STARD4Q96DR4 205 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 DNASE2O00115 360 aaPredicted RBP11.63□□□□□ -0.55
SMC6-201ENST00000351948 NDUFA2O43678 99 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 HTR1DP28221 377 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 OR4P4Q8NGL7 312 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 TMEM222Q9H0R3 208 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 SH2D2AQ9NP31 389 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 E9PLN8 166 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 ERVFC1-1P60608 527 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 RHOBP62745 196 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 AANATQ16613 207 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 OR13A1Q8NGR1 328 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 VKORC1Q9BQB6 163 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 RSRP1Q9BUV0 290 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 MIOXQ9UGB7 285 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 MSRB2Q9Y3D2 182 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 HMSDA8MTL9 139 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 C17orf100A8MU93 164 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 C12orf77C9JDV5 145 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 S1PR2O95136 353 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 SULT1A1P50225 295 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 WFDC3Q8IUB2 231 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 CABLES2Q9BTV7 478 aa11.63□□□□□ -0.55
SMC6-201ENST00000351948 ZNF737O75373 536 aa11.62□□□□□ -0.55
SMC6-201ENST00000351948 WNT5AP41221 380 aa11.62□□□□□ -0.55
SMC6-201ENST00000351948 RPL27AP46776 148 aaKnown RBP11.62□□□□□ -0.55
SMC6-201ENST00000351948 SCGB2A2Q13296 93 aa11.62□□□□□ -0.55
SMC6-201ENST00000351948 NRN1LQ496H8 165 aa11.62□□□□□ -0.55
SMC6-201ENST00000351948 LILRB1Q8NHL6 650 aaPredicted RBP11.62□□□□□ -0.55
SMC6-201ENST00000351948 GHITMQ9H3K2 345 aa11.62□□□□□ -0.55
SMC6-201ENST00000351948 PDLIM4P50479 330 aa11.62□□□□□ -0.55
SMC6-201ENST00000351948 ZNF561Q8N587 486 aa11.62□□□□□ -0.55
SMC6-201ENST00000351948 ZNF439Q8NDP4 499 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms