RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 GNG7O60262 68 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 CD38P28907 300 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 PAX2Q02962 417 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 Q56UQ5 140 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 MUC21Q5SSG8 566 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 OR4S2Q8NH73 311 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 APOBEC3DQ96AK3 386 aaPredicted RBP11.25□□□□□ -0.61
IFT88-202ENST00000351808 TMEM186Q96B77 213 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 TMEM204Q9BSN7 226 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 IL36BQ9NZH7 164 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 ALG1L2C9J202 215 aa11.24□□□□□ -0.61
IFT88-202ENST00000351808 RBPJQ06330 500 aa11.24□□□□□ -0.61
IFT88-202ENST00000351808 RNPS1Q15287 305 aaKnown RBP11.24□□□□□ -0.61
IFT88-202ENST00000351808 PMCHL1Q16048 86 aa11.24□□□□□ -0.61
IFT88-202ENST00000351808 PRSS57Q6UWY2 283 aa11.24□□□□□ -0.61
IFT88-202ENST00000351808 DEFB128Q7Z7B8 93 aa11.24□□□□□ -0.61
IFT88-202ENST00000351808 SFTPA2Q8IWL1 248 aa11.24□□□□□ -0.61
IFT88-202ENST00000351808 FER1L6-AS1Q8NA97 138 aa11.24□□□□□ -0.61
IFT88-202ENST00000351808 TSACCQ96A04 125 aaPredicted RBP11.24□□□□□ -0.61
IFT88-202ENST00000351808 MRPL13Q9BYD1 178 aaKnown RBP11.24□□□□□ -0.61
IFT88-202ENST00000351808 DEC1Q9P2X7 70 aa11.24□□□□□ -0.61
IFT88-202ENST00000351808 H3BML4 177 aa11.24□□□□□ -0.61
IFT88-202ENST00000351808 CELA3BP08861 270 aa11.24□□□□□ -0.61
IFT88-202ENST00000351808 SCTP09683 121 aa11.24□□□□□ -0.61
IFT88-202ENST00000351808 DEFB125Q8N687 156 aa11.24□□□□□ -0.61
IFT88-202ENST00000351808 OR1E3Q8WZA6 343 aa11.24□□□□□ -0.61
IFT88-202ENST00000351808 SAA2-SAA4A0A096LPE2 208 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 IGKV1-12A0A0C4DH73 117 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 G3V4G9 280 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 PDE6DO43924 150 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 PGLYRP1O75594 196 aaPredicted RBP11.23□□□□□ -0.61
IFT88-202ENST00000351808 IGKV1D-12P01611 117 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 PSG2P11465 335 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 LGALS4P56470 323 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 MALLQ13021 153 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 BVES-AS1Q5T3Y7 98 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 SAMD13Q5VXD3 122 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 OR1N2Q8NGR9 330 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 TSKUQ8WUA8 353 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 QTRT1Q9BXR0 403 aaKnown RBP11.23□□□□□ -0.61
IFT88-202ENST00000351808 MTIF3Q9H2K0 278 aaKnown RBP11.23□□□□□ -0.61
IFT88-202ENST00000351808 WNT16Q9UBV4 365 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 ESPL1Q14674 2120 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 A0A0J9YY10 115 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 A0A1W2PQU0 124 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 GJE1A6NN92 205 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 CD300LBA8K4G0 201 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 H0Y980 276 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 IGLV3-1P01715 115 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 SERPINE2P07093 398 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 OTX2P32243 289 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 ZNF324BQ6AW86 544 aaPredicted RBP11.23□□□□□ -0.61
IFT88-202ENST00000351808 C19orf35Q6ZS72 473 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 OSR2Q8N2R0 312 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 OR10P1Q8NGE3 313 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 ADIPOR1Q96A54 375 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 IL36GQ9NZH8 169 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 TIMM9Q9Y5J7 89 aa11.23□□□□□ -0.61
IFT88-202ENST00000351808 SIRPB1O00241 398 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 GRB2P62993 217 aaKnown RBP11.22□□□□□ -0.61
IFT88-202ENST00000351808 HTD2P86397 168 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 PSG7Q13046 419 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 TMEM211Q6ICI0 200 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 OR8I2Q8N0Y5 310 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 SFXN3Q9BWM7 321 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 ZNF407Q9C0G0 2248 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 FRG2CA6NGY1 282 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 AHRRA9YTQ3 701 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 SHISA8B8ZZ34 492 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 DEGS1O15121 323 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 PDCD6O75340 191 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 OR7C1O76099 320 aaPredicted RBP11.22□□□□□ -0.61
IFT88-202ENST00000351808 F2RP25116 425 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 SRIP30626 198 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 OR1D5P58170 312 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 SLC35B1P78383 322 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 MYBPHQ13203 477 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 HIST3H3Q16695 136 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 OR10J3Q5JRS4 329 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 LILRA6Q6PI73 481 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 OR4P4Q8NGL7 312 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 OR1B1Q8NGR6 318 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 SPSB1Q96BD6 273 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 MMABQ96EY8 250 aaPredicted RBP11.22□□□□□ -0.61
IFT88-202ENST00000351808 RARRES3Q9UL19 164 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 IGLC1P0CG04 106 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 COX5AP20674 150 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 GATA2P23769 480 aaPredicted RBP11.22□□□□□ -0.61
IFT88-202ENST00000351808 RPS16P62249 146 aaKnown RBP11.22□□□□□ -0.61
IFT88-202ENST00000351808 CST6Q15828 149 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 OR2Y1Q8NGV0 311 aa11.22□□□□□ -0.61
IFT88-202ENST00000351808 A6NJY4 79 aa11.21□□□□□ -0.61
IFT88-202ENST00000351808 H0YJW9 148 aa11.21□□□□□ -0.61
IFT88-202ENST00000351808 M0R1X1 148 aa11.21□□□□□ -0.61
IFT88-202ENST00000351808 RAMP3O60896 148 aa11.21□□□□□ -0.61
IFT88-202ENST00000351808 REG1AP05451 166 aa11.21□□□□□ -0.61
IFT88-202ENST00000351808 MSR1P21757 451 aa11.21□□□□□ -0.61
IFT88-202ENST00000351808 TFF3Q07654 80 aa11.21□□□□□ -0.61
IFT88-202ENST00000351808 PLCXD2Q0VAA5 305 aa11.21□□□□□ -0.61
IFT88-202ENST00000351808 OR8B8Q15620 311 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms