RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 NXPH3O95157 252 aa10.4□□□□□ -0.74
SMAD9-201ENST00000350148 MUC1P15941 1255 aaPredicted RBP10.4□□□□□ -0.74
SMAD9-201ENST00000350148 MPZP25189 248 aa10.4□□□□□ -0.74
SMAD9-201ENST00000350148 STUMQ69YW2 141 aa10.4□□□□□ -0.74
SMAD9-201ENST00000350148 SLC25A28Q96A46 364 aa10.4□□□□□ -0.74
SMAD9-201ENST00000350148 R3HDM4Q96D70 268 aa10.4□□□□□ -0.74
SMAD9-201ENST00000350148 ZNF430Q9H8G1 570 aaPredicted RBP10.4□□□□□ -0.74
SMAD9-201ENST00000350148 PLSCR2Q9NRY7 297 aa10.4□□□□□ -0.74
SMAD9-201ENST00000350148 TREM2Q9NZC2 230 aa10.4□□□□□ -0.74
SMAD9-201ENST00000350148 PRNDQ9UKY0 176 aa10.4□□□□□ -0.74
SMAD9-201ENST00000350148 A0A1W2PN81 502 aa10.4□□□□□ -0.74
SMAD9-201ENST00000350148 SYNGR2O43760 224 aa10.4□□□□□ -0.74
SMAD9-201ENST00000350148 YIF1AO95070 293 aa10.4□□□□□ -0.74
SMAD9-201ENST00000350148 CHRNA7P36544 502 aa10.4□□□□□ -0.74
SMAD9-201ENST00000350148 MIDNQ504T8 468 aa10.4□□□□□ -0.74
SMAD9-201ENST00000350148 MOB3BQ86TA1 216 aa10.4□□□□□ -0.74
SMAD9-201ENST00000350148 LRP11Q86VZ4 500 aa10.4□□□□□ -0.74
SMAD9-201ENST00000350148 DTX1Q86Y01 620 aa10.4□□□□□ -0.74
SMAD9-201ENST00000350148 ADAD2Q8NCV1 583 aaKnown RBP10.4□□□□□ -0.74
SMAD9-201ENST00000350148 JPT1Q9UK76 154 aa10.4□□□□□ -0.74
SMAD9-201ENST00000350148 FBLL1A6NHQ2 334 aaKnown RBP10.4□□□□□ -0.75
SMAD9-201ENST00000350148 CRYM-AS1A6NIL9 109 aa10.4□□□□□ -0.75
SMAD9-201ENST00000350148 E9PLN8 166 aa10.4□□□□□ -0.75
SMAD9-201ENST00000350148 DEDDO75618 318 aa10.4□□□□□ -0.75
SMAD9-201ENST00000350148 MPV17P39210 176 aa10.4□□□□□ -0.75
SMAD9-201ENST00000350148 GUCA2BQ16661 112 aa10.4□□□□□ -0.75
SMAD9-201ENST00000350148 FAM169BQ8N8A8 192 aa10.4□□□□□ -0.75
SMAD9-201ENST00000350148 CMTM2Q8TAZ6 248 aa10.4□□□□□ -0.75
SMAD9-201ENST00000350148 VKORC1Q9BQB6 163 aa10.4□□□□□ -0.75
SMAD9-201ENST00000350148 MSRB2Q9Y3D2 182 aa10.4□□□□□ -0.75
SMAD9-201ENST00000350148 PAM16Q9Y3D7 125 aa10.4□□□□□ -0.75
SMAD9-201ENST00000350148 LRRK1Q38SD2 2015 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 CACNA1IQ9P0X4 2223 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 IGFL3Q6UXB1 125 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 TMEM147Q9BVK8 224 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 C10orf142B7Z368 130 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 NMBP08949 121 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 CFPP27918 469 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 ASPHD2Q6ICH7 369 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 FAM89BQ8N5H3 189 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 NHLRC2Q8NBF2 726 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 ISOC2Q96AB3 205 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 RPUSD4Q96CM3 377 aaKnown RBP10.39□□□□□ -0.75
SMAD9-201ENST00000350148 HDHD3Q9BSH5 251 aaPredicted RBP10.39□□□□□ -0.75
SMAD9-201ENST00000350148 WASHC3Q9Y3C0 194 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 ASCC3Q8N3C0 2202 aaKnown RBP10.39□□□□□ -0.75
SMAD9-201ENST00000350148 CD40P25942 277 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 PPOXP50336 477 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 SPSB4Q96A44 273 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 STARD4Q96DR4 205 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 ZNF837Q96EG3 531 aaPredicted RBP10.39□□□□□ -0.75
SMAD9-201ENST00000350148 ZNF488Q96MN9 340 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 ATG101Q9BSB4 218 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 SLC38A11Q08AI6 406 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 TBR1Q16650 682 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 ZNF645Q8N7E2 425 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 TUBD1Q9UJT1 453 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 PITPNC1Q9UKF7 332 aa10.39□□□□□ -0.75
SMAD9-201ENST00000350148 ZNF729A6NN14 1252 aaPredicted RBP10.38□□□□□ -0.75
SMAD9-201ENST00000350148 DLL1O00548 723 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 ADAP1O75689 374 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 APOBEC3AP31941 199 aaPredicted RBP10.38□□□□□ -0.75
SMAD9-201ENST00000350148 AESQ08117 197 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 SRSF7Q16629 238 aaKnown RBP eCLIP10.38□□□□□ -0.75
SMAD9-201ENST00000350148 DPPA3Q6W0C5 159 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 TMEM171Q8WVE6 324 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 SEC11CQ9BY50 192 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 TMEM222Q9H0R3 208 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 CISD1Q9NZ45 108 aaKnown RBP10.38□□□□□ -0.75
SMAD9-201ENST00000350148 HPRT1P00492 218 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 HBZP02008 142 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 WBP1Q96G27 269 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 DEFB108AA8MXU0 73 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 FAM90A26D6RGX4 464 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 P2RY4P51582 365 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 OR5B3Q8NH48 314 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 MRPL24Q96A35 216 aaKnown RBP10.38□□□□□ -0.75
SMAD9-201ENST00000350148 AHCTF1Q8WYP5 2266 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 IGHV3-43A0A0B4J1X8 118 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 MED19A0JLT2 244 aaPredicted RBP10.38□□□□□ -0.75
SMAD9-201ENST00000350148 MBD3L4A6NDZ8 208 aaPredicted RBP10.38□□□□□ -0.75
SMAD9-201ENST00000350148 MBD3L3A6NE82 208 aaPredicted RBP10.38□□□□□ -0.75
SMAD9-201ENST00000350148 MBD3L5A6NJ08 208 aaPredicted RBP10.38□□□□□ -0.75
SMAD9-201ENST00000350148 IGHV3-43DP0DP04 118 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 ZP1P60852 638 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 DOLPP1Q86YN1 238 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 EIF4E3Q8N5X7 224 aaKnown RBP10.38□□□□□ -0.75
SMAD9-201ENST00000350148 MBD3L2Q8NHZ7 208 aaPredicted RBP10.38□□□□□ -0.75
SMAD9-201ENST00000350148 TNFSF18Q9UNG2 199 aa10.38□□□□□ -0.75
SMAD9-201ENST00000350148 RP1P56715 2156 aa10.37□□□□□ -0.75
SMAD9-201ENST00000350148 ODAMA1E959 279 aa10.37□□□□□ -0.75
SMAD9-201ENST00000350148 ARG1P05089 322 aa10.37□□□□□ -0.75
SMAD9-201ENST00000350148 KLK2P20151 261 aa10.37□□□□□ -0.75
SMAD9-201ENST00000350148 OTX1P32242 354 aaPredicted RBP10.37□□□□□ -0.75
SMAD9-201ENST00000350148 RND3P61587 244 aa10.37□□□□□ -0.75
SMAD9-201ENST00000350148 RPL31P62899 125 aaKnown RBP10.37□□□□□ -0.75
SMAD9-201ENST00000350148 AWAT1Q58HT5 328 aa10.37□□□□□ -0.75
SMAD9-201ENST00000350148 RNASE6Q93091 150 aaKnown RBP10.37□□□□□ -0.75
SMAD9-201ENST00000350148 ZNF714Q96N38 554 aa10.37□□□□□ -0.75
SMAD9-201ENST00000350148 RNF2Q99496 336 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms