RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 UFSP1Q6NVU6 142 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 ZNF525Q8N782 197 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 OR4P4Q8NGL7 312 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 OR2AE1Q8NHA4 323 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 COX14Q96I36 57 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 SPIN2AQ99865 258 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 SPIN2BQ9BPZ2 258 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 TMEM204Q9BSN7 226 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 PRDM6Q9NQX0 595 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 ATG2AQ2TAZ0 1938 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 TRBV20OR9-2A0A075B6H5 130 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 A0A087X0K7 114 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 LOC102725191A0A1B0GVB3 256 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 C7orf71A4D174 169 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 HCRTR1O43613 425 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 OTX1P32242 354 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-203ENST00000349748 KISS1Q15726 138 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 PMCHL1Q16048 86 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 GABRA6Q16445 453 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 KLHL24Q6TFL4 600 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 NEGR1Q7Z3B1 354 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 RAB42Q8N4Z0 105 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 TSKUQ8WUA8 353 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 PPP1R3CQ9UQK1 317 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 UBE2L5PA0A1B0GUS4 154 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 GPR75O95800 540 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 PRNPP04156 253 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 SERPINE2P07093 398 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 SCGB1A1P11684 91 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 ZNF10P21506 573 aaPredicted RBP9.05□□□□□ -0.96
CAPN3-203ENST00000349748 SEC13P55735 322 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 SLC35B1P78383 322 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 ZNF324BQ6AW86 544 aaPredicted RBP9.05□□□□□ -0.96
CAPN3-203ENST00000349748 ACSM6Q6P461 480 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 ZNF788Q6ZQV5 615 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 BHLHA15Q7RTS1 189 aaPredicted RBP9.05□□□□□ -0.96
CAPN3-203ENST00000349748 TBC1D26Q86UD7 250 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 STPG3Q8N7X2 389 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 CT55Q8WUE5 264 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 JMJD8Q96S16 334 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 NAT8BQ9UHF3 227 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 LHFPL6Q9Y693 200 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 C2CD4DB7Z1M9 353 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 CD5LO43866 347 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 NPY1RP25929 384 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 SSTR5P35346 364 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 ATP5G3P48201 142 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 PLP1P60201 277 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 SERF2P84101 59 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 TGFBR3Q03167 851 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 CEACAM21Q3KPI0 293 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 EBLN2Q6P2I7 272 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 CRIP3Q6Q6R5 217 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 ASCL4Q6XD76 172 aa9.05□□□□□ -0.96
CAPN3-203ENST00000349748 PSMG3Q9BT73 122 aaPredicted RBP9.05□□□□□ -0.96
CAPN3-203ENST00000349748 KIAA1549Q9HCM3 1950 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 A0A0G2JRQ6 117 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 TRAPPC2LH3BP13 241 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 CDIPTO14735 213 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 IL12BP29460 328 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 SRIP30626 198 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 HERV-K104P61576 105 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 RPS18P62269 152 aaKnown RBP9.04□□□□□ -0.96
CAPN3-203ENST00000349748 RPL24P83731 157 aaKnown RBP9.04□□□□□ -0.96
CAPN3-203ENST00000349748 FOXE3Q13461 319 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 NMSQ5H8A3 153 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 PRAMEF5Q5TYX0 476 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 PRAMEF6Q5VXH4 476 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 KIR3DL3Q8N743 410 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 CCDC71LQ8N9Z2 235 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 RNF133Q8WVZ7 376 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 ZNF479Q96JC4 524 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 OR4C12Q96R67 309 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 TDRD6O60522 2096 aaKnown RBP9.04□□□□□ -0.96
CAPN3-203ENST00000349748 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.04□□□□□ -0.96
CAPN3-203ENST00000349748 hDV102S1A0JD36 115 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 GUCA1AP43080 201 aaPredicted RBP9.04□□□□□ -0.96
CAPN3-203ENST00000349748 MEF2CQ06413 473 aaPredicted RBP9.04□□□□□ -0.96
CAPN3-203ENST00000349748 EIF3IQ13347 325 aaKnown RBP9.04□□□□□ -0.96
CAPN3-203ENST00000349748 LRRC75BQ2VPJ9 315 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 C2orf27AQ580R0 203 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 OR10G8Q8NGN5 311 aa9.04□□□□□ -0.96
CAPN3-203ENST00000349748 C5orf63A6NC05 138 aa9.03□□□□□ -0.96
CAPN3-203ENST00000349748 SLC22A20A6NK97 555 aa9.03□□□□□ -0.96
CAPN3-203ENST00000349748 AGFG2O95081 481 aa9.03□□□□□ -0.96
CAPN3-203ENST00000349748 TIMP3P35625 211 aa9.03□□□□□ -0.96
CAPN3-203ENST00000349748 P2RY2P41231 377 aa9.03□□□□□ -0.96
CAPN3-203ENST00000349748 PSG3Q16557 428 aa9.03□□□□□ -0.96
CAPN3-203ENST00000349748 ACSF3Q4G176 576 aaPredicted RBP9.03□□□□□ -0.96
CAPN3-203ENST00000349748 RD3Q7Z3Z2 195 aa9.03□□□□□ -0.96
CAPN3-203ENST00000349748 SLC25A40Q8TBP6 338 aa9.03□□□□□ -0.96
CAPN3-203ENST00000349748 PIGTQ969N2 578 aa9.03□□□□□ -0.96
CAPN3-203ENST00000349748 ARL2-SNX15V9GYD0 113 aa9.03□□□□□ -0.96
CAPN3-203ENST00000349748 C2orf16Q68DN1 1984 aa9.03□□□□□ -0.96
CAPN3-203ENST00000349748 PGCP20142 388 aa9.03□□□□□ -0.96
CAPN3-203ENST00000349748 UQCRFS1P47985 274 aa9.03□□□□□ -0.96
CAPN3-203ENST00000349748 HNRNPA1L2Q32P51 320 aaKnown RBP9.03□□□□□ -0.96
CAPN3-203ENST00000349748 TMEM177Q53S58 311 aa9.03□□□□□ -0.96
CAPN3-203ENST00000349748 CCDC144NLQ6NUI1 221 aa9.03□□□□□ -0.96
CAPN3-203ENST00000349748 C19orf35Q6ZS72 473 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms