RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 A0A0G2JNG1 304 aa5.08□□□□□ -1.6
RFC1-201ENST00000349703 M0R1X1 148 aa5.08□□□□□ -1.6
RFC1-201ENST00000349703 AVPP01185 164 aa5.08□□□□□ -1.6
RFC1-201ENST00000349703 SOD3P08294 240 aa5.08□□□□□ -1.6
RFC1-201ENST00000349703 FABP2P12104 132 aa5.08□□□□□ -1.6
RFC1-201ENST00000349703 CPMP14384 443 aa5.08□□□□□ -1.6
RFC1-201ENST00000349703 SNCAP37840 140 aa5.08□□□□□ -1.6
RFC1-201ENST00000349703 SMCPP49901 116 aaPredicted RBP5.08□□□□□ -1.6
RFC1-201ENST00000349703 FGF8P55075 233 aaPredicted RBP5.08□□□□□ -1.6
RFC1-201ENST00000349703 KIR2DS5Q14953 304 aa5.08□□□□□ -1.6
RFC1-201ENST00000349703 HLA-DRB5Q30154 266 aa5.08□□□□□ -1.6
RFC1-201ENST00000349703 SCGB1D4Q6XE38 83 aa5.08□□□□□ -1.6
RFC1-201ENST00000349703 OR5L1Q8NGL2 311 aa5.08□□□□□ -1.6
RFC1-201ENST00000349703 OR5D14Q8NGL3 314 aa5.08□□□□□ -1.6
RFC1-201ENST00000349703 MPLKIPQ8TAP9 179 aa5.08□□□□□ -1.6
RFC1-201ENST00000349703 EMG1Q92979 244 aaKnown RBP5.08□□□□□ -1.6
RFC1-201ENST00000349703 PACRGQ96M98 296 aaPredicted RBP5.08□□□□□ -1.6
RFC1-201ENST00000349703 LINC00597Q9H2U6 94 aa5.08□□□□□ -1.6
RFC1-201ENST00000349703 NYNRINQ9P2P1 1898 aaKnown RBP5.08□□□□□ -1.6
RFC1-201ENST00000349703 MAP1LC3B2A6NCE7 125 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 ZFPL1O95159 310 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 IGFBP6P24592 240 aaPredicted RBP5.07□□□□□ -1.6
RFC1-201ENST00000349703 EMP2P54851 167 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 FOXF2Q12947 444 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 TMEM241Q24JQ0 296 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 ISXQ2M1V0 245 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 OR10J3Q5JRS4 329 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 MRPL21Q7Z2W9 205 aaKnown RBP5.07□□□□□ -1.6
RFC1-201ENST00000349703 NUFIP2Q7Z417 695 aaKnown RBP5.07□□□□□ -1.6
RFC1-201ENST00000349703 CD177Q8N6Q3 437 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 OR1E3Q8WZA6 343 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 SDF2Q99470 211 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 MAP1LC3BQ9GZQ8 125 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 CACNG5Q9UF02 275 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 TRAV9-1A0A075B6T8 112 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 IFNL4K9M1U5 179 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 CDC42EP2O14613 210 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 HPRT1P00492 218 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 HOXA5P20719 270 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 CCKARP32238 428 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 EFNA3P52797 238 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 SRSF9Q13242 221 aaKnown RBP eCLIP5.07□□□□□ -1.6
RFC1-201ENST00000349703 SKP2Q13309 424 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 CDKN3Q16667 212 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 RFLNAQ6ZTI6 216 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.07□□□□□ -1.6
RFC1-201ENST00000349703 DHCR7Q9UBM7 475 aaKnown RBP5.07□□□□□ -1.6
RFC1-201ENST00000349703 PDCD11Q14690 1871 aaKnown RBP5.07□□□□□ -1.6
RFC1-201ENST00000349703 KBTBD11-OT1A0A1B0GTJ5 212 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 COLCA2A8K830 154 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 INAFM1C9JVW0 142 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 J3QRE1 110 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 PMP2P02689 132 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 PTHLHP12272 177 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 COL11A2P13942 1736 aaPredicted RBP5.07□□□□□ -1.6
RFC1-201ENST00000349703 CD200P41217 278 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 NKX2-1P43699 371 aaPredicted RBP5.07□□□□□ -1.6
RFC1-201ENST00000349703 RUNX3Q13761 415 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 ZNF876PQ49A33 203 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 CLLU1OSQ5K130 101 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 LINC00596Q86U02 117 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 PTX4Q96A99 478 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 GNPNAT1Q96EK6 184 aaPredicted RBP5.07□□□□□ -1.6
RFC1-201ENST00000349703 AQP10Q96PS8 301 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 PRO1933Q9H354 126 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 CLN8Q9UBY8 286 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 FNDC1Q4ZHG4 1894 aaPredicted RBP5.07□□□□□ -1.6
RFC1-201ENST00000349703 TRAV14DV4A0A0A6YYC5 116 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 TMEM50AO95807 157 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 STATHP02808 62 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 TBXA2RP21731 343 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 RPL24P83731 157 aaKnown RBP5.07□□□□□ -1.6
RFC1-201ENST00000349703 FAM3AP98173 230 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 PNRC1Q12796 327 aaPredicted RBP5.07□□□□□ -1.6
RFC1-201ENST00000349703 PRDX4Q13162 271 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 CENPWQ5EE01 88 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 C10orf91Q5T1B1 145 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 EHFQ9NZC4 300 aa5.07□□□□□ -1.6
RFC1-201ENST00000349703 WNT9BO14905 357 aa5.06□□□□□ -1.6
RFC1-201ENST00000349703 SEC11BP0C7V7 166 aa5.06□□□□□ -1.6
RFC1-201ENST00000349703 ZNF25P17030 456 aaPredicted RBP5.06□□□□□ -1.6
RFC1-201ENST00000349703 HRH1P35367 487 aa5.06□□□□□ -1.6
RFC1-201ENST00000349703 SLC25A53Q5H9E4 307 aa5.06□□□□□ -1.6
RFC1-201ENST00000349703 ANKRD37Q7Z713 158 aa5.06□□□□□ -1.6
RFC1-201ENST00000349703 MIEN1Q9BRT3 115 aa5.06□□□□□ -1.6
RFC1-201ENST00000349703 ANXA10Q9UJ72 324 aa5.06□□□□□ -1.6
RFC1-201ENST00000349703 CLDN16Q9Y5I7 305 aa5.06□□□□□ -1.6
RFC1-201ENST00000349703 OR2J2O76002 312 aa5.06□□□□□ -1.6
RFC1-201ENST00000349703 RPL36AP83881 106 aaKnown RBP5.06□□□□□ -1.6
RFC1-201ENST00000349703 UNC119Q13432 240 aa5.06□□□□□ -1.6
RFC1-201ENST00000349703 OR1C1Q15619 314 aa5.06□□□□□ -1.6
RFC1-201ENST00000349703 MRGPRGQ86SM5 289 aa5.06□□□□□ -1.6
RFC1-201ENST00000349703 LGI3Q8N145 548 aa5.06□□□□□ -1.6
RFC1-201ENST00000349703 ZADH2Q8N4Q0 377 aa5.06□□□□□ -1.6
RFC1-201ENST00000349703 GVQW1Q8N7I0 195 aa5.06□□□□□ -1.6
RFC1-201ENST00000349703 OR5R1Q8NH85 324 aa5.06□□□□□ -1.6
RFC1-201ENST00000349703 NTNG2Q96CW9 530 aa5.06□□□□□ -1.6
RFC1-201ENST00000349703 VWCEQ96DN2 955 aa5.06□□□□□ -1.6
RFC1-201ENST00000349703 MS4A6EQ96DS6 147 aa5.06□□□□□ -1.6
RFC1-201ENST00000349703 OR51I2Q9H344 312 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms