RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 TRAV38-1A0A0B4J264 116 aa15.1■□□□□ 0.01
APP-202ENST00000348990 TRAV24A0A0B4J272 114 aa15.1■□□□□ 0.01
APP-202ENST00000348990 OTX2P32243 289 aa15.1■□□□□ 0.01
APP-202ENST00000348990 ABLIM2Q6H8Q1 611 aa15.1■□□□□ 0.01
APP-202ENST00000348990 NUFIP2Q7Z417 695 aaKnown RBP15.1■□□□□ 0.01
APP-202ENST00000348990 BAGE3Q86Y29 109 aa15.1■□□□□ 0.01
APP-202ENST00000348990 BAGE2Q86Y30 109 aa15.1■□□□□ 0.01
APP-202ENST00000348990 LSM10Q969L4 123 aaKnown RBP15.1■□□□□ 0.01
APP-202ENST00000348990 ATG2AQ2TAZ0 1938 aa15.1■□□□□ 0.01
APP-202ENST00000348990 ZNF716A6NP11 495 aa15.09■□□□□ 0.01
APP-202ENST00000348990 KITLGP21583 273 aa15.09■□□□□ 0.01
APP-202ENST00000348990 PLP2Q04941 152 aa15.09■□□□□ 0.01
APP-202ENST00000348990 COA6Q5JTJ3 125 aaKnown RBP15.09■□□□□ 0.01
APP-202ENST00000348990 VN1R17PQ8TDU5 208 aa15.09■□□□□ 0.01
APP-202ENST00000348990 ZDHHC16Q969W1 377 aa15.09■□□□□ 0.01
APP-202ENST00000348990 PROK2Q9HC23 129 aa15.09■□□□□ 0.01
APP-202ENST00000348990 PI4KAP42356 2102 aa15.09■□□□□ 0.01
APP-202ENST00000348990 SRP14P37108 136 aaKnown RBP15.09■□□□□ 0.01
APP-202ENST00000348990 CDC34P49427 236 aaPredicted RBP15.09■□□□□ 0.01
APP-202ENST00000348990 TDGF1P3P51864 188 aa15.09■□□□□ 0.01
APP-202ENST00000348990 FOXG1P55316 489 aaPredicted RBP15.09■□□□□ 0.01
APP-202ENST00000348990 TGFBR3Q03167 851 aa15.09■□□□□ 0.01
APP-202ENST00000348990 MSMO1Q15800 293 aa15.09■□□□□ 0.01
APP-202ENST00000348990 GCSAMLQ5JQS6 135 aa15.09■□□□□ 0.01
APP-202ENST00000348990 CADM4Q8NFZ8 388 aa15.09■□□□□ 0.01
APP-202ENST00000348990 TMEM147Q9BVK8 224 aa15.09■□□□□ 0.01
APP-202ENST00000348990 C1QTNF5Q9BXJ0 243 aa15.09■□□□□ 0.01
APP-202ENST00000348990 SEMA5BQ9P283 1151 aa15.09■□□□□ 0.01
APP-202ENST00000348990 EXPH5Q8NEV8 1989 aa15.09■□□□□ 0.01
APP-202ENST00000348990 ZG16O60844 167 aa15.08■□□□□ 0.01
APP-202ENST00000348990 RPLP1P05386 114 aaKnown RBP15.08■□□□□ 0.01
APP-202ENST00000348990 ATP5G3P48201 142 aa15.08■□□□□ 0.01
APP-202ENST00000348990 AGMATQ9BSE5 352 aa15.08■□□□□ 0.01
APP-202ENST00000348990 REPIN1Q9BWE0 567 aaKnown RBP15.08■□□□□ 0.01
APP-202ENST00000348990 LILRA1O75019 489 aa15.08■□□□□ 0
APP-202ENST00000348990 SLC25A6P12236 298 aa15.08■□□□□ 0
APP-202ENST00000348990 ZNF585BQ52M93 769 aa15.08■□□□□ 0
APP-202ENST00000348990 C1orf194Q5T5A4 169 aa15.08■□□□□ 0
APP-202ENST00000348990 RAMP3O60896 148 aa15.08■□□□□ 0
APP-202ENST00000348990 DKK1O94907 266 aa15.08■□□□□ 0
APP-202ENST00000348990 ZNF90Q03938 601 aa15.08■□□□□ 0
APP-202ENST00000348990 Q6ZS49 121 aa15.08■□□□□ 0
APP-202ENST00000348990 DRAM1Q8N682 238 aa15.08■□□□□ 0
APP-202ENST00000348990 SMRP1Q8NCR6 262 aa15.08■□□□□ 0
APP-202ENST00000348990 CACNA1EQ15878 2313 aa15.08■□□□□ 0
APP-202ENST00000348990 SPINK4O60575 86 aa15.07■□□□□ 0
APP-202ENST00000348990 SYNGR4O95473 234 aa15.07■□□□□ 0
APP-202ENST00000348990 APOBEC3DQ96AK3 386 aaPredicted RBP15.07■□□□□ 0
APP-202ENST00000348990 HIPK2Q9H2X6 1198 aa15.07■□□□□ 0
APP-202ENST00000348990 IGHV1-45A0A0A0MS14 117 aa15.07■□□□□ 0
APP-202ENST00000348990 F6UZH7 168 aa15.07■□□□□ 0
APP-202ENST00000348990 GGCTO75223 188 aaKnown RBP15.07■□□□□ 0
APP-202ENST00000348990 RAC2P15153 192 aa15.07■□□□□ 0
APP-202ENST00000348990 PAX1P15863 534 aa15.07■□□□□ 0
APP-202ENST00000348990 ZNF573Q86YE8 665 aa15.07■□□□□ 0
APP-202ENST00000348990 OR5A2Q8NGI9 324 aa15.07■□□□□ 0
APP-202ENST00000348990 HSPB9Q9BQS6 159 aa15.07■□□□□ 0
APP-202ENST00000348990 TMEM208Q9BTX3 173 aa15.07■□□□□ 0
APP-202ENST00000348990 PRDM14Q9GZV8 571 aa15.07■□□□□ 0
APP-202ENST00000348990 FRYLO94915 3013 aa15.07■□□□□ 0
APP-202ENST00000348990 NPSP0C0P6 89 aa15.07■□□□□ 0
APP-202ENST00000348990 OR5I1Q13606 314 aa15.07■□□□□ 0
APP-202ENST00000348990 LTC4SQ16873 150 aa15.07■□□□□ 0
APP-202ENST00000348990 TDRG1Q3Y452 100 aa15.07■□□□□ 0
APP-202ENST00000348990 DNASE2BQ8WZ79 361 aa15.07■□□□□ 0
APP-202ENST00000348990 OR5P3Q8WZ94 311 aa15.07■□□□□ 0
APP-202ENST00000348990 PLPPR2Q96GM1 343 aa15.07■□□□□ 0
APP-202ENST00000348990 OR2D2Q9H210 308 aa15.07■□□□□ 0
APP-202ENST00000348990 IRF2P14316 349 aa15.06■□□□□ 0
APP-202ENST00000348990 CBLN1P23435 193 aa15.06■□□□□ 0
APP-202ENST00000348990 DTD1Q8TEA8 209 aa15.06■□□□□ 0
APP-202ENST00000348990 COL5A1P20908 1838 aaPredicted RBP15.06■□□□□ 0
APP-202ENST00000348990 LRP5LA4QPB2 252 aa15.06■□□□□ 0
APP-202ENST00000348990 SRD5A2P31213 254 aa15.06■□□□□ 0
APP-202ENST00000348990 NXPH2O95156 264 aa15.05■□□□□ 0
APP-202ENST00000348990 GNG3P63215 75 aa15.05■□□□□ 0
APP-202ENST00000348990 FAM53AQ6NSI3 398 aaPredicted RBP15.05■□□□□ 0
APP-202ENST00000348990 SVILO95425 2214 aa15.05■□□□□ 0
APP-202ENST00000348990 CCL4P13236 92 aa15.05■□□□□ -0
APP-202ENST00000348990 ADMP35318 185 aa15.05■□□□□ -0
APP-202ENST00000348990 TFPI2P48307 235 aa15.05■□□□□ -0
APP-202ENST00000348990 KRTDAPP60985 99 aa15.05■□□□□ -0
APP-202ENST00000348990 OR1L1Q8NH94 360 aa15.05■□□□□ -0
APP-202ENST00000348990 VAMP8Q9BV40 100 aa15.05■□□□□ -0
APP-202ENST00000348990 A0A1B0GWJ7 208 aa15.05■□□□□ -0
APP-202ENST00000348990 C17orf112F2Z3M2 114 aa15.05■□□□□ -0
APP-202ENST00000348990 NPPCP23582 126 aa15.05■□□□□ -0
APP-202ENST00000348990 TPPP2P59282 170 aa15.05■□□□□ -0
APP-202ENST00000348990 MRPL14Q6P1L8 145 aaKnown RBP15.05■□□□□ -0
APP-202ENST00000348990 H2BFWTQ7Z2G1 175 aa15.05■□□□□ -0
APP-202ENST00000348990 LINC01551Q86U37 167 aa15.05■□□□□ -0
APP-202ENST00000348990 KCNE4Q8WWG9 221 aa15.05■□□□□ -0
APP-202ENST00000348990 ZCCHC14Q8WYQ9 949 aaKnown RBP15.05■□□□□ -0
APP-202ENST00000348990 NINJ1Q92982 152 aa15.05■□□□□ -0
APP-202ENST00000348990 WDYHV1Q96HA8 205 aa15.05■□□□□ -0
APP-202ENST00000348990 NPCDR1Q9BY65 106 aa15.05■□□□□ -0
APP-202ENST00000348990 TUBG2Q9NRH3 451 aa15.05■□□□□ -0
APP-202ENST00000348990 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.05■□□□□ -0
APP-202ENST00000348990 KCNIP1Q9NZI2 227 aa15.05■□□□□ -0
APP-202ENST00000348990 GTF3C1Q12789 2109 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms