RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 ANXA7P20073 488 aaKnown RBP15.4■□□□□ 0.06
CHMP4A-201ENST00000347519 SURF2Q15527 256 aaPredicted RBP15.4■□□□□ 0.06
CHMP4A-201ENST00000347519 TMED4Q7Z7H5 227 aa15.4■□□□□ 0.06
CHMP4A-201ENST00000347519 PIP4P2Q8N4L2 257 aa15.4■□□□□ 0.06
CHMP4A-201ENST00000347519 ZNF221Q9UK13 617 aa15.4■□□□□ 0.06
CHMP4A-201ENST00000347519 GAB2Q9UQC2 676 aa15.4■□□□□ 0.06
CHMP4A-201ENST00000347519 GPR31O00270 319 aa15.39■□□□□ 0.05
CHMP4A-201ENST00000347519 ECI1P42126 302 aa15.39■□□□□ 0.05
CHMP4A-201ENST00000347519 REG1BP48304 166 aa15.39■□□□□ 0.05
CHMP4A-201ENST00000347519 ZNF137PP52743 207 aa15.39■□□□□ 0.05
CHMP4A-201ENST00000347519 RPL30P62888 115 aaKnown RBP15.39■□□□□ 0.05
CHMP4A-201ENST00000347519 BRD3OSQ6XYD6 125 aa15.39■□□□□ 0.05
CHMP4A-201ENST00000347519 ZNF833PQ6ZTB9 187 aa15.39■□□□□ 0.05
CHMP4A-201ENST00000347519 DYNAPQ8N1N2 210 aa15.39■□□□□ 0.05
CHMP4A-201ENST00000347519 BVESQ8NE79 360 aa15.39■□□□□ 0.05
CHMP4A-201ENST00000347519 ZFAND1Q8TCF1 268 aa15.39■□□□□ 0.05
CHMP4A-201ENST00000347519 FAM216AQ8WUB2 273 aa15.39■□□□□ 0.05
CHMP4A-201ENST00000347519 CAPSLQ8WWF8 208 aa15.39■□□□□ 0.05
CHMP4A-201ENST00000347519 COPZ2Q9P299 210 aa15.39■□□□□ 0.05
CHMP4A-201ENST00000347519 M0R1X1 148 aa15.38■□□□□ 0.05
CHMP4A-201ENST00000347519 RAB29O14966 203 aa15.38■□□□□ 0.05
CHMP4A-201ENST00000347519 NPFFO15130 113 aa15.38■□□□□ 0.05
CHMP4A-201ENST00000347519 PGLYRP1O75594 196 aaPredicted RBP15.38■□□□□ 0.05
CHMP4A-201ENST00000347519 FSHBP01225 129 aa15.38■□□□□ 0.05
CHMP4A-201ENST00000347519 PIGPP57054 158 aa15.38■□□□□ 0.05
CHMP4A-201ENST00000347519 LPCAT3Q6P1A2 487 aa15.38■□□□□ 0.05
CHMP4A-201ENST00000347519 PLET1Q6UQ28 207 aa15.38■□□□□ 0.05
CHMP4A-201ENST00000347519 DRAXINQ8NBI3 349 aaPredicted RBP15.38■□□□□ 0.05
CHMP4A-201ENST00000347519 MARVELD1Q9BSK0 173 aa15.38■□□□□ 0.05
CHMP4A-201ENST00000347519 SLC2A9Q9NRM0 540 aa15.38■□□□□ 0.05
CHMP4A-201ENST00000347519 PIPOXQ9P0Z9 390 aa15.38■□□□□ 0.05
CHMP4A-201ENST00000347519 C14orf166Q9Y224 244 aaKnown RBP15.38■□□□□ 0.05
CHMP4A-201ENST00000347519 LY6G6DO95868 133 aa15.37■□□□□ 0.05
CHMP4A-201ENST00000347519 HTR1DP28221 377 aa15.37■□□□□ 0.05
CHMP4A-201ENST00000347519 SAA4P35542 130 aa15.37■□□□□ 0.05
CHMP4A-201ENST00000347519 TRIM16LQ309B1 348 aa15.37■□□□□ 0.05
CHMP4A-201ENST00000347519 AKR1E2Q96JD6 320 aa15.37■□□□□ 0.05
CHMP4A-201ENST00000347519 SCGB3A2Q96PL1 93 aa15.37■□□□□ 0.05
CHMP4A-201ENST00000347519 MRPL20Q9BYC9 149 aaKnown RBP15.37■□□□□ 0.05
CHMP4A-201ENST00000347519 YAE1D1Q9NRH1 226 aa15.37■□□□□ 0.05
CHMP4A-201ENST00000347519 LINC00473A8K010 186 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 INMT-MINDY4F8WBC2 141 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 CT45A6P0DMU7 189 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 CT45A5P0DMU8 189 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 CT45A7P0DMV0 189 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 CD99P14209 185 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 AKR1C4P17516 323 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 RND3P61587 244 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 MSMO1Q15800 293 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 ABCA11PQ4W5N1 156 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 TPTE2P1Q5T6R2 138 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 GPR157Q5UAW9 335 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 GLDNQ6ZMI3 551 aaPredicted RBP15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 IL17RELQ6ZVW7 336 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 TBC1D26Q86UD7 250 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 SLC25A42Q86VD7 318 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 ZNF486Q96H40 463 aaPredicted RBP15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 DPM3Q9P2X0 92 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 AMMECR1Q9Y4X0 333 aaPredicted RBP15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 A0A0B4J293 547 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 SLC22A5O76082 557 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 IL3RAP26951 378 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 DUTP33316 252 aaKnown RBP15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 MECP2P51608 486 aaKnown RBP15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 SUPT4H1P63272 117 aaKnown RBP15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 ZNF383Q8NA42 475 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 ZBTB34Q8NCN2 500 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 RTN4IP1Q8WWV3 396 aaPredicted RBP15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 HILPDAQ9Y5L2 63 aa15.36■□□□□ 0.05
CHMP4A-201ENST00000347519 TLN2Q9Y4G6 2542 aa15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 CRYM-AS1A6NIL9 109 aa15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 LEUTXA8MZ59 168 aa15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 MPPED1O15442 326 aa15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 LGALS4P56470 323 aa15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 BRWD1-AS2P59051 145 aa15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 DHODHQ02127 395 aa15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 PPP1R1AQ13522 171 aa15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 MIDNQ504T8 468 aa15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 MINOS1Q5TGZ0 78 aa15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 BCL6BQ8N143 479 aaPredicted RBP15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 OR52B4Q8NGK2 314 aa15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 OR51H1Q8NH63 302 aa15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 S1PR3Q99500 378 aa15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 NABP2Q9BQ15 211 aa15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 SEC22CQ9BRL7 303 aa15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 GHITMQ9H3K2 345 aa15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 PRR13Q9NZ81 148 aa15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 TBL2Q9Y4P3 447 aaKnown RBP15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 MINOS1-NBL1R4GNA1 71 aa15.35■□□□□ 0.05
CHMP4A-201ENST00000347519 A0A0U1RQK1 487 aa15.34■□□□□ 0.05
CHMP4A-201ENST00000347519 A0A1W2PPI3 338 aa15.34■□□□□ 0.05
CHMP4A-201ENST00000347519 PEX14O75381 377 aa15.34■□□□□ 0.05
CHMP4A-201ENST00000347519 EPHA1P21709 976 aa15.34■□□□□ 0.05
CHMP4A-201ENST00000347519 ZNF816Q0VGE8 651 aaPredicted RBP15.34■□□□□ 0.05
CHMP4A-201ENST00000347519 SSX2Q16385 188 aa15.34■□□□□ 0.05
CHMP4A-201ENST00000347519 SP6Q3SY56 376 aa15.34■□□□□ 0.05
CHMP4A-201ENST00000347519 OR2B11Q5JQS5 317 aa15.34■□□□□ 0.05
CHMP4A-201ENST00000347519 FAM120AOSQ5T036 256 aa15.34■□□□□ 0.05
CHMP4A-201ENST00000347519 FAM71F2Q6NXP2 309 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms