RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 RAB37Q96AX2 223 aa15.07■□□□□ 0
SPAST-202ENST00000345662 RASL11BQ9BPW5 248 aa15.07■□□□□ 0
SPAST-202ENST00000345662 C2CD4DB7Z1M9 353 aa15.07■□□□□ 0
SPAST-202ENST00000345662 ARL14EPLP0DKL9 152 aa15.07■□□□□ 0
SPAST-202ENST00000345662 CBLN1P23435 193 aa15.07■□□□□ 0
SPAST-202ENST00000345662 FXYD3Q14802 87 aa15.07■□□□□ 0
SPAST-202ENST00000345662 F8VVB4 439 aa15.07■□□□□ 0
SPAST-202ENST00000345662 F8VWA3 439 aa15.07■□□□□ 0
SPAST-202ENST00000345662 ZNF645Q8N7E2 425 aa15.07■□□□□ 0
SPAST-202ENST00000345662 NEUROG3Q9Y4Z2 214 aa15.07■□□□□ 0
SPAST-202ENST00000345662 FGF5P12034 268 aa15.06■□□□□ 0
SPAST-202ENST00000345662 SSPNQ14714 243 aa15.06■□□□□ 0
SPAST-202ENST00000345662 DICER1Q9UPY3 1922 aaKnown RBP15.06■□□□□ 0
SPAST-202ENST00000345662 COL24A1Q17RW2 1714 aa15.06■□□□□ 0
SPAST-202ENST00000345662 NPIPB7O75200 414 aa15.06■□□□□ 0
SPAST-202ENST00000345662 TNFSF15O95150 251 aa15.06■□□□□ 0
SPAST-202ENST00000345662 OTX1P32242 354 aaPredicted RBP15.06■□□□□ 0
SPAST-202ENST00000345662 CTHRC1Q96CG8 243 aa15.06■□□□□ 0
SPAST-202ENST00000345662 WDYHV1Q96HA8 205 aa15.06■□□□□ 0
SPAST-202ENST00000345662 ASCL3Q9NQ33 180 aa15.06■□□□□ 0
SPAST-202ENST00000345662 ZNF818PQ6ZRF7 136 aa15.06■□□□□ 0
SPAST-202ENST00000345662 PEF1Q9UBV8 284 aaKnown RBP15.06■□□□□ 0
SPAST-202ENST00000345662 BTF3P20290 206 aaKnown RBP15.06■□□□□ 0
SPAST-202ENST00000345662 RNF126Q9BV68 326 aa15.06■□□□□ 0
SPAST-202ENST00000345662 MAS1LP35410 378 aa15.05■□□□□ 0
SPAST-202ENST00000345662 ZNF716A6NP11 495 aa15.05■□□□□ 0
SPAST-202ENST00000345662 PRNTQ86SH4 94 aa15.05■□□□□ 0
SPAST-202ENST00000345662 SLC25A28Q96A46 364 aa15.05■□□□□ 0
SPAST-202ENST00000345662 AUP1Q9Y679 476 aa15.05■□□□□ 0
SPAST-202ENST00000345662 TMSB15BA0A087X1C1 80 aa15.05■□□□□ -0
SPAST-202ENST00000345662 IGHV1OR15-9A0A0B4J2B8 117 aa15.05■□□□□ -0
SPAST-202ENST00000345662 RTBDNQ9BSG5 229 aaPredicted RBP15.05■□□□□ -0
SPAST-202ENST00000345662 ZNF646O15015 1829 aaPredicted RBP15.05■□□□□ -0
SPAST-202ENST00000345662 TMEM238LA0A1B0GVL6 79 aa15.05■□□□□ -0
SPAST-202ENST00000345662 A6NJY4 79 aa15.05■□□□□ -0
SPAST-202ENST00000345662 GNG7O60262 68 aa15.05■□□□□ -0
SPAST-202ENST00000345662 GCSHP23434 173 aa15.05■□□□□ -0
SPAST-202ENST00000345662 MIEN1Q9BRT3 115 aa15.05■□□□□ -0
SPAST-202ENST00000345662 SDF2L1Q9HCN8 221 aa15.05■□□□□ -0
SPAST-202ENST00000345662 MUC15Q8N387 334 aa15.04■□□□□ -0
SPAST-202ENST00000345662 PMCHL2Q9BQD1 86 aa15.04■□□□□ -0
SPAST-202ENST00000345662 OR2J1Q9GZK6 312 aa15.04■□□□□ -0
SPAST-202ENST00000345662 AMMECR1Q9Y4X0 333 aaPredicted RBP15.04■□□□□ -0
SPAST-202ENST00000345662 OR2Y1Q8NGV0 311 aa15.04■□□□□ -0
SPAST-202ENST00000345662 ONECUT1Q9UBC0 465 aa15.04■□□□□ -0
SPAST-202ENST00000345662 SMIM10L1P0DMW3 83 aa15.04■□□□□ -0
SPAST-202ENST00000345662 IL9P15248 144 aa15.04■□□□□ -0
SPAST-202ENST00000345662 MNX1P50219 401 aaPredicted RBP15.04■□□□□ -0
SPAST-202ENST00000345662 DLX1P56177 255 aa15.04■□□□□ -0
SPAST-202ENST00000345662 SLC25A40Q8TBP6 338 aa15.04■□□□□ -0
SPAST-202ENST00000345662 SMIM10Q96HG1 83 aa15.04■□□□□ -0
SPAST-202ENST00000345662 CDX2Q99626 313 aaPredicted RBP15.04■□□□□ -0
SPAST-202ENST00000345662 REG4Q9BYZ8 158 aa15.04■□□□□ -0
SPAST-202ENST00000345662 CLEC5AQ9NY25 188 aa15.04■□□□□ -0
SPAST-202ENST00000345662 ANKRD31Q8N7Z5 1873 aa15.04■□□□□ -0
SPAST-202ENST00000345662 CLDND2Q8NHS1 167 aa15.04■□□□□ -0
SPAST-202ENST00000345662 HIST1H2BKO60814 126 aa15.03■□□□□ -0
SPAST-202ENST00000345662 HIST1H2BJP06899 126 aa15.03■□□□□ -0
SPAST-202ENST00000345662 HIST1H2BOP23527 126 aa15.03■□□□□ -0
SPAST-202ENST00000345662 HIST1H2BBP33778 126 aa15.03■□□□□ -0
SPAST-202ENST00000345662 HIST1H2BDP58876 126 aa15.03■□□□□ -0
SPAST-202ENST00000345662 HIST1H2BCP62807 126 aa15.03■□□□□ -0
SPAST-202ENST00000345662 GNB2P62879 340 aa15.03■□□□□ -0
SPAST-202ENST00000345662 HIST2H2BEQ16778 126 aa15.03■□□□□ -0
SPAST-202ENST00000345662 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.03■□□□□ -0
SPAST-202ENST00000345662 CCL17Q92583 94 aa15.03■□□□□ -0
SPAST-202ENST00000345662 HIST1H2BHQ93079 126 aa15.03■□□□□ -0
SPAST-202ENST00000345662 GUCD1Q96NT3 240 aa15.03■□□□□ -0
SPAST-202ENST00000345662 HIST1H2BNQ99877 126 aa15.03■□□□□ -0
SPAST-202ENST00000345662 HIST1H2BMQ99879 126 aa15.03■□□□□ -0
SPAST-202ENST00000345662 ZG16O60844 167 aa15.03■□□□□ -0
SPAST-202ENST00000345662 HYPMO75409 117 aa15.03■□□□□ -0
SPAST-202ENST00000345662 CLDN14O95500 239 aa15.03■□□□□ -0
SPAST-202ENST00000345662 CRYBB3P26998 211 aa15.03■□□□□ -0
SPAST-202ENST00000345662 SPINK14Q6IE38 97 aa15.03■□□□□ -0
SPAST-202ENST00000345662 FAM222BQ8WU58 562 aa15.03■□□□□ -0
SPAST-202ENST00000345662 TRAV17A0A0B4J275 112 aa15.03■□□□□ -0
SPAST-202ENST00000345662 COLCA2A8K830 154 aa15.03■□□□□ -0
SPAST-202ENST00000345662 IGHMP01871 453 aa15.03■□□□□ -0
SPAST-202ENST00000345662 GLRX2Q9NS18 164 aa15.03■□□□□ -0
SPAST-202ENST00000345662 A0A0J9YW62 118 aa15.03■□□□□ -0
SPAST-202ENST00000345662 GREM1O60565 184 aa15.03■□□□□ -0
SPAST-202ENST00000345662 MTURNQ8N3F0 131 aa15.03■□□□□ -0
SPAST-202ENST00000345662 SPSB2Q99619 263 aa15.03■□□□□ -0
SPAST-202ENST00000345662 TMPRSS2O15393 492 aa15.02■□□□□ -0
SPAST-202ENST00000345662 MT-CO3P00414 261 aa15.02■□□□□ -0
SPAST-202ENST00000345662 LINC00869P0C866 280 aa15.02■□□□□ -0
SPAST-202ENST00000345662 SELENOTP62341 195 aa15.02■□□□□ -0
SPAST-202ENST00000345662 EGR4Q05215 589 aa15.02■□□□□ -0
SPAST-202ENST00000345662 RTP5Q14D33 572 aa15.02■□□□□ -0
SPAST-202ENST00000345662 IZUMO4Q1ZYL8 232 aa15.02■□□□□ -0
SPAST-202ENST00000345662 EGR1P18146 543 aa15.02■□□□□ -0
SPAST-202ENST00000345662 SNAI3Q3KNW1 292 aa15.02■□□□□ -0
SPAST-202ENST00000345662 MOGAT3Q86VF5 341 aa15.02■□□□□ -0
SPAST-202ENST00000345662 OR2H2O95918 312 aa15.02□□□□□ -0.01
SPAST-202ENST00000345662 COX7A1P24310 79 aa15.02□□□□□ -0.01
SPAST-202ENST00000345662 KIR2DL1P43626 348 aaPredicted RBP15.02□□□□□ -0.01
SPAST-202ENST00000345662 KIR2DL2P43627 348 aaPredicted RBP15.02□□□□□ -0.01
SPAST-202ENST00000345662 TNFSF10P50591 281 aa15.02□□□□□ -0.01
SPAST-202ENST00000345662 HIGD1AQ9Y241 93 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms