RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 KLF7O75840 302 aaPredicted RBP15.58■□□□□ 0.08
SMC4-201ENST00000344722 GAS1P54826 345 aa15.58■□□□□ 0.08
SMC4-201ENST00000344722 HIST3H2BBQ8N257 126 aa15.58■□□□□ 0.08
SMC4-201ENST00000344722 DICER1Q9UPY3 1922 aaKnown RBP15.58■□□□□ 0.08
SMC4-201ENST00000344722 SRFP11831 508 aa15.58■□□□□ 0.08
SMC4-201ENST00000344722 UFC1Q9Y3C8 167 aa15.58■□□□□ 0.08
SMC4-201ENST00000344722 SPINK2P20155 84 aa15.58■□□□□ 0.08
SMC4-201ENST00000344722 SAPCD1Q5SSQ6 148 aa15.58■□□□□ 0.08
SMC4-201ENST00000344722 OR1L8Q8NGR8 309 aa15.58■□□□□ 0.08
SMC4-201ENST00000344722 AP5S1Q9NUS5 200 aa15.58■□□□□ 0.08
SMC4-201ENST00000344722 TBX6O95947 436 aaPredicted RBP15.57■□□□□ 0.08
SMC4-201ENST00000344722 ICAM4Q14773 271 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 TNXAQ16473 311 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 TMEM140Q9NV12 185 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 IL36BQ9NZH7 164 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 TBL2Q9Y4P3 447 aaKnown RBP15.57■□□□□ 0.08
SMC4-201ENST00000344722 CLDN14O95500 239 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 LIFP15018 202 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 PSG4Q00888 419 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 FXYD3Q14802 87 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 LRRC75BQ2VPJ9 315 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 WFDC8Q8IUA0 241 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 RAB37Q96AX2 223 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 NDUFA2O43678 99 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 GREM1O60565 184 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 SAXO1Q8IYX7 474 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 TM2D1Q9BX74 207 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 ASPHD2Q6ICH7 369 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 TMEM92Q6UXU6 159 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 RPEQ96AT9 228 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 ZNF488Q96MN9 340 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 GUCD1Q96NT3 240 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 CDX2Q99626 313 aaPredicted RBP15.57■□□□□ 0.08
SMC4-201ENST00000344722 HIST1H2BLQ99880 126 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 THYN1Q9P016 225 aa15.57■□□□□ 0.08
SMC4-201ENST00000344722 NPIPB13A6NJU9 1138 aa15.56■□□□□ 0.08
SMC4-201ENST00000344722 NPIPB4C9JG80 1138 aa15.56■□□□□ 0.08
SMC4-201ENST00000344722 TUSC5Q8IXB3 177 aa15.56■□□□□ 0.08
SMC4-201ENST00000344722 SNRNP40Q96DI7 357 aaKnown RBP15.56■□□□□ 0.08
SMC4-201ENST00000344722 TMEM70Q9BUB7 260 aa15.56■□□□□ 0.08
SMC4-201ENST00000344722 LINC00869P0C866 280 aa15.56■□□□□ 0.08
SMC4-201ENST00000344722 IGFBP3P17936 291 aaPredicted RBP15.56■□□□□ 0.08
SMC4-201ENST00000344722 TMEM136Q6ZRR5 245 aa15.56■□□□□ 0.08
SMC4-201ENST00000344722 K7EQS6 105 aa15.56■□□□□ 0.08
SMC4-201ENST00000344722 SPINT1O43278 529 aa15.56■□□□□ 0.08
SMC4-201ENST00000344722 NUTF2P61970 127 aaKnown RBP15.56■□□□□ 0.08
SMC4-201ENST00000344722 LAMTOR2Q9Y2Q5 125 aa15.56■□□□□ 0.08
SMC4-201ENST00000344722 CCDC88CQ9P219 2028 aa15.56■□□□□ 0.08
SMC4-201ENST00000344722 MYO16Q9Y6X6 1858 aa15.56■□□□□ 0.08
SMC4-201ENST00000344722 LOC389332A0A1B0GUA5 103 aa15.56■□□□□ 0.08
SMC4-201ENST00000344722 S1PR2O95136 353 aa15.56■□□□□ 0.08
SMC4-201ENST00000344722 ZNF735P0CB33 412 aa15.56■□□□□ 0.08
SMC4-201ENST00000344722 MEOX1P50221 254 aa15.56■□□□□ 0.08
SMC4-201ENST00000344722 TCTAP57738 103 aa15.56■□□□□ 0.08
SMC4-201ENST00000344722 EGR4Q05215 589 aa15.56■□□□□ 0.08
SMC4-201ENST00000344722 DNLZQ5SXM8 178 aa15.56■□□□□ 0.08
SMC4-201ENST00000344722 STRCP1A6NGW2 1772 aa15.55■□□□□ 0.08
SMC4-201ENST00000344722 H0YIZ8 118 aa15.55■□□□□ 0.08
SMC4-201ENST00000344722 RTP5Q14D33 572 aa15.55■□□□□ 0.08
SMC4-201ENST00000344722 Q6ZS52 159 aa15.55■□□□□ 0.08
SMC4-201ENST00000344722 PRRX1P54821 245 aa15.55■□□□□ 0.08
SMC4-201ENST00000344722 KLF3P57682 345 aaPredicted RBP15.55■□□□□ 0.08
SMC4-201ENST00000344722 RPL30P62888 115 aaKnown RBP15.55■□□□□ 0.08
SMC4-201ENST00000344722 HYAL1Q12794 435 aa15.55■□□□□ 0.08
SMC4-201ENST00000344722 KCNS1Q96KK3 526 aa15.55■□□□□ 0.08
SMC4-201ENST00000344722 FAM117AQ9C073 453 aa15.55■□□□□ 0.08
SMC4-201ENST00000344722 TINAGQ9UJW2 476 aa15.55■□□□□ 0.08
SMC4-201ENST00000344722 C3orf80F5H4A9 247 aa15.55■□□□□ 0.08
SMC4-201ENST00000344722 ORM1P02763 201 aa15.55■□□□□ 0.08
SMC4-201ENST00000344722 TNFAIP6P98066 277 aaPredicted RBP15.55■□□□□ 0.08
SMC4-201ENST00000344722 GAB4Q2WGN9 574 aa15.55■□□□□ 0.08
SMC4-201ENST00000344722 GUSBP11Q6P575 273 aa15.55■□□□□ 0.08
SMC4-201ENST00000344722 ERASQ7Z444 233 aa15.55■□□□□ 0.08
SMC4-201ENST00000344722 OR2Y1Q8NGV0 311 aa15.55■□□□□ 0.08
SMC4-201ENST00000344722 RASL11BQ9BPW5 248 aa15.55■□□□□ 0.08
SMC4-201ENST00000344722 MCM3APO60318 1980 aa15.55■□□□□ 0.08
SMC4-201ENST00000344722 GCSHP23434 173 aa15.55■□□□□ 0.08
SMC4-201ENST00000344722 OTX1P32242 354 aaPredicted RBP15.55■□□□□ 0.08
SMC4-201ENST00000344722 P2RY6Q15077 328 aa15.55■□□□□ 0.08
SMC4-201ENST00000344722 LINC01565O15544 149 aa15.54■□□□□ 0.08
SMC4-201ENST00000344722 PRNTQ86SH4 94 aa15.54■□□□□ 0.08
SMC4-201ENST00000344722 ASCL3Q9NQ33 180 aa15.54■□□□□ 0.08
SMC4-201ENST00000344722 COL5A3P25940 1745 aaPredicted RBP15.54■□□□□ 0.08
SMC4-201ENST00000344722 NXPH1P58417 271 aa15.54■□□□□ 0.08
SMC4-201ENST00000344722 PHF7Q9BWX1 381 aaPredicted RBP15.54■□□□□ 0.08
SMC4-201ENST00000344722 WNT10AQ9GZT5 417 aa15.54■□□□□ 0.08
SMC4-201ENST00000344722 ZG16O60844 167 aa15.54■□□□□ 0.08
SMC4-201ENST00000344722 LYZL6O75951 148 aa15.54■□□□□ 0.08
SMC4-201ENST00000344722 PTCRAQ6ISU1 281 aaPredicted RBP15.54■□□□□ 0.08
SMC4-201ENST00000344722 HARBI1Q96MB7 349 aa15.54■□□□□ 0.08
SMC4-201ENST00000344722 GPHA2Q96T91 129 aa15.54■□□□□ 0.08
SMC4-201ENST00000344722 CRYBB3P26998 211 aa15.54■□□□□ 0.08
SMC4-201ENST00000344722 SPRED2Q7Z698 418 aa15.54■□□□□ 0.08
SMC4-201ENST00000344722 OR10AG1Q8NH19 301 aa15.54■□□□□ 0.08
SMC4-201ENST00000344722 PLA2G3Q9NZ20 509 aa15.54■□□□□ 0.08
SMC4-201ENST00000344722 AMMECR1Q9Y4X0 333 aaPredicted RBP15.54■□□□□ 0.08
SMC4-201ENST00000344722 RGPD3A6NKT7 1758 aaPredicted RBP15.54■□□□□ 0.08
SMC4-201ENST00000344722 RGPD4Q7Z3J3 1758 aa15.54■□□□□ 0.08
SMC4-201ENST00000344722 SNRPCP09234 159 aaKnown RBP15.53■□□□□ 0.08
SMC4-201ENST00000344722 SSPNQ14714 243 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms