RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 COMMD1Q8N668 190 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 NPAS1Q99742 590 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 SMIM7Q9BQ49 75 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 REPIN1Q9BWE0 567 aaKnown RBP13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 NAV2Q8IVL1 2488 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 A0A1W2PP11 408 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 CORTO00230 105 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 TM4SF5O14894 197 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 PSG7Q13046 419 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 DHRS7BQ6IAN0 325 aaPredicted RBP13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 CENPVQ7Z7K6 275 aaPredicted RBP13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 MARVELD3Q96A59 401 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 AUP1Q9Y679 476 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 SCTP09683 121 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 IGSF11Q5DX21 431 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 RXFP4Q8TDU9 374 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 ABHD14BQ96IU4 210 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 KCNK7Q9Y2U2 307 aa13.97□□□□□ -0.17
SMARCA4-201ENST00000344626 ADAP1O75689 374 aa13.96□□□□□ -0.17
SMARCA4-201ENST00000344626 CDC34P49427 236 aaPredicted RBP13.96□□□□□ -0.17
SMARCA4-201ENST00000344626 POC1AQ8NBT0 407 aa13.96□□□□□ -0.17
SMARCA4-201ENST00000344626 ZNRF1Q8ND25 227 aa13.96□□□□□ -0.17
SMARCA4-201ENST00000344626 DOK5Q9P104 306 aa13.96□□□□□ -0.17
SMARCA4-201ENST00000344626 POMT1Q9Y6A1 747 aa13.96□□□□□ -0.17
SMARCA4-201ENST00000344626 CTRB1P17538 263 aa13.96□□□□□ -0.17
SMARCA4-201ENST00000344626 CTRB2Q6GPI1 263 aa13.96□□□□□ -0.17
SMARCA4-201ENST00000344626 CD200R1LQ6Q8B3 271 aa13.96□□□□□ -0.17
SMARCA4-201ENST00000344626 WDR61Q9GZS3 305 aaKnown RBP13.96□□□□□ -0.17
SMARCA4-201ENST00000344626 TECRQ9NZ01 308 aaKnown RBP13.96□□□□□ -0.17
SMARCA4-201ENST00000344626 TOX4O94842 621 aa13.96□□□□□ -0.17
SMARCA4-201ENST00000344626 COMPP49747 757 aaPredicted RBP13.96□□□□□ -0.17
SMARCA4-201ENST00000344626 ZDHHC11Q9H8X9 412 aa13.96□□□□□ -0.17
SMARCA4-201ENST00000344626 H0Y980 276 aa13.96□□□□□ -0.18
SMARCA4-201ENST00000344626 PAX6P26367 422 aa13.96□□□□□ -0.18
SMARCA4-201ENST00000344626 TMEM50BP56557 158 aa13.96□□□□□ -0.18
SMARCA4-201ENST00000344626 LOXL3P58215 753 aa13.96□□□□□ -0.18
SMARCA4-201ENST00000344626 ZNF90Q03938 601 aa13.96□□□□□ -0.18
SMARCA4-201ENST00000344626 FRMPD3Q5JV73 1810 aa13.96□□□□□ -0.18
SMARCA4-201ENST00000344626 PF4P02776 101 aa13.96□□□□□ -0.18
SMARCA4-201ENST00000344626 TMEM33P57088 247 aa13.96□□□□□ -0.18
SMARCA4-201ENST00000344626 SAT2Q96F10 170 aaPredicted RBP13.96□□□□□ -0.18
SMARCA4-201ENST00000344626 P2RX4Q99571 388 aa13.96□□□□□ -0.18
SMARCA4-201ENST00000344626 ATP5SQ99766 215 aa13.96□□□□□ -0.18
SMARCA4-201ENST00000344626 NRIP2Q9BQI9 281 aa13.96□□□□□ -0.18
SMARCA4-201ENST00000344626 THBDP07204 575 aa13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 ID1P41134 155 aa13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 CRIM1Q9NZV1 1036 aa13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 TSC2P49815 1807 aa13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 MBPP02686 304 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 WT1P19544 449 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 GLIPR1P48060 266 aa13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 CRYBA2P53672 197 aa13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 ZNF154Q13106 437 aa13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 RTN4RL2Q86UN3 420 aa13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 OR10G4Q8NGN3 311 aa13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 OR10G9Q8NGN4 311 aa13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 OR10G7Q8NGN6 311 aa13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 TMEM167BQ9NRX6 74 aa13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 ADAM11O75078 769 aa13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 CLEC12BQ2HXU8 276 aa13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 PRR27Q6MZM9 219 aa13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 GGNQ86UU5 652 aa13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 WDR31Q8NA23 367 aa13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 MRPL37Q9BZE1 423 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 IGHG3P01860 377 aa13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 RPL8P62917 257 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 C20orf204Q6ZNR8 217 aa13.95□□□□□ -0.18
SMARCA4-201ENST00000344626 FOXG1P55316 489 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-201ENST00000344626 UNQ5815/PRO19632Q6UWF5 114 aa13.94□□□□□ -0.18
SMARCA4-201ENST00000344626 WDFY1Q8IWB7 410 aa13.94□□□□□ -0.18
SMARCA4-201ENST00000344626 BLNKQ8WV28 456 aa13.94□□□□□ -0.18
SMARCA4-201ENST00000344626 C20orf202A1L168 122 aa13.94□□□□□ -0.18
SMARCA4-201ENST00000344626 MEF2CQ06413 473 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-201ENST00000344626 OR8I2Q8N0Y5 310 aa13.94□□□□□ -0.18
SMARCA4-201ENST00000344626 OR2T10Q8NGZ9 312 aa13.94□□□□□ -0.18
SMARCA4-201ENST00000344626 SAV1Q9H4B6 383 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-201ENST00000344626 SERTM2A0A1B0GWG4 89 aa13.94□□□□□ -0.18
SMARCA4-201ENST00000344626 UQCRFS1P47985 274 aa13.94□□□□□ -0.18
SMARCA4-201ENST00000344626 NPBWR2P48146 333 aa13.94□□□□□ -0.18
SMARCA4-201ENST00000344626 ZNF705FA8MVS1 300 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-201ENST00000344626 ZNF705DP0CH99 300 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-201ENST00000344626 ZNF705BP0CI00 300 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-201ENST00000344626 H3F3AP84243 136 aa13.94□□□□□ -0.18
SMARCA4-201ENST00000344626 PDPNQ86YL7 162 aa13.94□□□□□ -0.18
SMARCA4-201ENST00000344626 SLC7A5P1Q8MH63 180 aa13.94□□□□□ -0.18
SMARCA4-201ENST00000344626 STXBP6Q8NFX7 210 aa13.94□□□□□ -0.18
SMARCA4-201ENST00000344626 MAP1LC3B2A6NCE7 125 aa13.93□□□□□ -0.18
SMARCA4-201ENST00000344626 WNT9BO14905 357 aa13.93□□□□□ -0.18
SMARCA4-201ENST00000344626 SULT1A1P50225 295 aa13.93□□□□□ -0.18
SMARCA4-201ENST00000344626 DYNLT3P51808 116 aa13.93□□□□□ -0.18
SMARCA4-201ENST00000344626 H3F3CQ6NXT2 135 aa13.93□□□□□ -0.18
SMARCA4-201ENST00000344626 DNM1P46Q6ZS02 220 aa13.93□□□□□ -0.18
SMARCA4-201ENST00000344626 LYZL2Q7Z4W2 148 aa13.93□□□□□ -0.18
SMARCA4-201ENST00000344626 MAP1LC3BQ9GZQ8 125 aa13.93□□□□□ -0.18
SMARCA4-201ENST00000344626 OR51I2Q9H344 312 aa13.93□□□□□ -0.18
SMARCA4-201ENST00000344626 BAGE3Q86Y29 109 aa13.93□□□□□ -0.18
SMARCA4-201ENST00000344626 BAGE2Q86Y30 109 aa13.93□□□□□ -0.18
SMARCA4-201ENST00000344626 PDGFAP04085 211 aa13.93□□□□□ -0.18
SMARCA4-201ENST00000344626 CLPSP04118 112 aa13.93□□□□□ -0.18
SMARCA4-201ENST00000344626 U3KQ87 197 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms