RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 C21orf62-AS1Q17RA5 79 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 CST9LP1Q5W188 147 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 Q8N7P7 452 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 SGMS2Q8NHU3 365 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 PSMF1Q92530 271 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 TXNDC17Q9BRA2 123 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 LOC102723996A0A087X1L8 192 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 RBFOX2O43251 390 aaKnown RBP eCLIP8.15□□□□□ -1.1
HOXA1-201ENST00000343060 SYNGR4O95473 234 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 KRASP01116 189 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 CD82P27701 267 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 Q0VG73 95 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 SYT13Q7L8C5 426 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 AAED1Q7RTV5 226 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 ZNF114Q8NC26 417 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 CPEB3Q8NE35 698 aaKnown RBP8.15□□□□□ -1.1
HOXA1-201ENST00000343060 OR4B1Q8NGF8 309 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 RDH5Q92781 318 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 RNF212BA8MTL3 300 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 SYNGR1O43759 233 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 SCRG1O75711 98 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 WISP2O76076 250 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 CDKN1AP38936 164 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 CTRLP40313 264 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 MSMO1Q15800 293 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 TCF23Q7RTU1 214 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 FGFRL1Q8N441 504 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 DEFB119Q8N690 84 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 Q8N976 141 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 OR5A2Q8NGI9 324 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 HSPB9Q9BQS6 159 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 ZDHHC11Q9H8X9 412 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 MSL2Q9HCI7 577 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 ASCL3Q9NQ33 180 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 DLL3Q9NYJ7 618 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 PPP1R3CQ9UQK1 317 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 TRBV20OR9-2A0A075B6H5 130 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 MDFIC2A0A1B0GVS7 189 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 CBR3O75828 277 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 SERF1AO75920 110 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 TDGF1P13385 188 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 ATP5G3P48201 142 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 RAB7AP51149 207 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 DMRTA1Q5VZB9 504 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 GGNQ86UU5 652 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 DRAM1Q8N682 238 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 OR1L1Q8NH94 360 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 PRDM6Q9NQX0 595 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 RYDENQ9NUL5 291 aaKnown RBP8.14□□□□□ -1.11
HOXA1-201ENST00000343060 PAM16Q9Y3D7 125 aa8.14□□□□□ -1.11
HOXA1-201ENST00000343060 GRIFINA4D1Z8 144 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 C17orf112F2Z3M2 114 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 CRISP2P16562 243 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 CD33P20138 364 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 TIMP3P35625 211 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 PMP22Q01453 160 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 OR5I1Q13606 314 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 MRPL14Q6P1L8 145 aaKnown RBP8.13□□□□□ -1.11
HOXA1-201ENST00000343060 Q6P435 159 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 OR5T1Q8NG75 326 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 OR5AU1Q8NGC0 362 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 OR10P1Q8NGE3 313 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 OR6C1Q96RD1 312 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 DERL1Q9BUN8 251 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 SLC45A2Q9UMX9 530 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 WIPI2Q9Y4P8 454 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 LRRC30A6NM36 301 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 NDUFB4O95168 129 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 EIF4EBP1Q13541 118 aaPredicted RBP8.13□□□□□ -1.11
HOXA1-201ENST00000343060 ZNF709Q8N972 641 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 TSTD1Q8NFU3 115 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 CADM4Q8NFZ8 388 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 KCNE4Q8WWG9 221 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 CIB3Q96Q77 187 aaPredicted RBP8.13□□□□□ -1.11
HOXA1-201ENST00000343060 SZT2Q5T011 3432 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 ZNF407Q9C0G0 2248 aa8.13□□□□□ -1.11
HOXA1-201ENST00000343060 SAA2-SAA4A0A096LPE2 208 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 SIAH2O43255 324 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 CRYAAP02489 173 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 CELA2AP08217 269 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 MYF5P13349 255 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 EGR1P18146 543 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 KITLGP21583 273 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 ZNF497Q6ZNH5 498 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 FAM58AQ8N1B3 248 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 ZBTB34Q8NCN2 500 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 OR10G8Q8NGN5 311 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 TMEM45BQ96B21 275 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 SLC35E1Q96K37 410 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 RNF2Q99496 336 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 PKIBQ9C010 78 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 MRPL18Q9H0U6 180 aaKnown RBP8.12□□□□□ -1.11
HOXA1-201ENST00000343060 DNAJC4Q9NNZ3 241 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 IL36BQ9NZH7 164 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 RARRES3Q9UL19 164 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 KCNS2Q9ULS6 477 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 WDR83OSQ9Y284 106 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 TRBV9A0A0B4J1U6 114 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 ODAMA1E959 279 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 CBLN1P23435 193 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms