RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 RPS10-NUDT3A0A1W2PQS6 291 aa7.56□□□□□ -1.2
ATXN3-201ENST00000340660 SULT1B1O43704 296 aa7.56□□□□□ -1.2
ATXN3-201ENST00000340660 PROP1O75360 226 aa7.56□□□□□ -1.2
ATXN3-201ENST00000340660 KDM4BO94953 1096 aa7.56□□□□□ -1.2
ATXN3-201ENST00000340660 FADS2O95864 444 aaKnown RBP7.56□□□□□ -1.2
ATXN3-201ENST00000340660 SHBGP04278 402 aa7.56□□□□□ -1.2
ATXN3-201ENST00000340660 GZMHP20718 246 aa7.56□□□□□ -1.2
ATXN3-201ENST00000340660 EMP1P54849 157 aa7.56□□□□□ -1.2
ATXN3-201ENST00000340660 CRMP1Q14194 572 aa7.56□□□□□ -1.2
ATXN3-201ENST00000340660 PTGES3Q15185 160 aaKnown RBP7.56□□□□□ -1.2
ATXN3-201ENST00000340660 TMEM41BQ5BJD5 291 aa7.56□□□□□ -1.2
ATXN3-201ENST00000340660 VTCN1Q7Z7D3 282 aa7.56□□□□□ -1.2
ATXN3-201ENST00000340660 OTOSQ8NHW6 89 aa7.56□□□□□ -1.2
ATXN3-201ENST00000340660 DAZAP1Q96EP5 407 aaKnown RBP7.56□□□□□ -1.2
ATXN3-201ENST00000340660 ALG8Q9BVK2 526 aa7.56□□□□□ -1.2
ATXN3-201ENST00000340660 ANKRD19PQ9H560 264 aa7.56□□□□□ -1.2
ATXN3-201ENST00000340660 GORASP2Q9H8Y8 452 aa7.56□□□□□ -1.2
ATXN3-201ENST00000340660 GNG12Q9UBI6 72 aa7.56□□□□□ -1.2
ATXN3-201ENST00000340660 NUFIP1Q9UHK0 495 aaKnown RBP7.56□□□□□ -1.2
ATXN3-201ENST00000340660 TRBV4-1A0A0J9YWV2 114 aa7.55□□□□□ -1.2
ATXN3-201ENST00000340660 H3BNX3 289 aa7.55□□□□□ -1.2
ATXN3-201ENST00000340660 UBDO15205 165 aa7.55□□□□□ -1.2
ATXN3-201ENST00000340660 OR9G9P0C7N8 305 aa7.55□□□□□ -1.2
ATXN3-201ENST00000340660 TFPI2P48307 235 aa7.55□□□□□ -1.2
ATXN3-201ENST00000340660 GYS2P54840 703 aa7.55□□□□□ -1.2
ATXN3-201ENST00000340660 LEMD1Q68G75 181 aa7.55□□□□□ -1.2
ATXN3-201ENST00000340660 CLEC19AQ6UXS0 136 aa7.55□□□□□ -1.2
ATXN3-201ENST00000340660 GLDNQ6ZMI3 551 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-201ENST00000340660 Q6ZSR3 168 aa7.55□□□□□ -1.2
ATXN3-201ENST00000340660 TRMT10CQ7L0Y3 403 aaKnown RBP7.55□□□□□ -1.2
ATXN3-201ENST00000340660 SERPINA12Q8IW75 414 aa7.55□□□□□ -1.2
ATXN3-201ENST00000340660 SLC15A3Q8IY34 581 aa7.55□□□□□ -1.2
ATXN3-201ENST00000340660 PQLC1Q8N2U9 271 aa7.55□□□□□ -1.2
ATXN3-201ENST00000340660 UBLCP1Q8WVY7 318 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-201ENST00000340660 OR52B2Q96RD2 323 aa7.55□□□□□ -1.2
ATXN3-201ENST00000340660 EXOSC1Q9Y3B2 195 aaKnown RBP7.55□□□□□ -1.2
ATXN3-201ENST00000340660 SNX5Q9Y5X3 404 aa7.55□□□□□ -1.2
ATXN3-201ENST00000340660 S4R3C0 116 aa7.55□□□□□ -1.2
ATXN3-201ENST00000340660 DHRS7CA6NNS2 312 aa7.54□□□□□ -1.2
ATXN3-201ENST00000340660 CCDC22O60826 627 aa7.54□□□□□ -1.2
ATXN3-201ENST00000340660 OR2J3O76001 311 aa7.54□□□□□ -1.2
ATXN3-201ENST00000340660 C1QBP02746 253 aa7.54□□□□□ -1.2
ATXN3-201ENST00000340660 REG1AP05451 166 aa7.54□□□□□ -1.2
ATXN3-201ENST00000340660 RAP2AP10114 183 aa7.54□□□□□ -1.2
ATXN3-201ENST00000340660 GALP22466 123 aa7.54□□□□□ -1.2
ATXN3-201ENST00000340660 CMC4P56277 68 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-201ENST00000340660 PDZK1IP1Q13113 114 aa7.54□□□□□ -1.2
ATXN3-201ENST00000340660 LRRC23Q53EV4 343 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-201ENST00000340660 FAM222AQ5U5X8 452 aa7.54□□□□□ -1.2
ATXN3-201ENST00000340660 STON2Q8WXE9 905 aa7.54□□□□□ -1.2
ATXN3-201ENST00000340660 CGREF1Q99674 301 aa7.54□□□□□ -1.2
ATXN3-201ENST00000340660 MAGT1Q9H0U3 335 aa7.54□□□□□ -1.2
ATXN3-201ENST00000340660 SAA2-SAA4A0A096LPE2 208 aa7.53□□□□□ -1.2
ATXN3-201ENST00000340660 H0YJW9 148 aa7.53□□□□□ -1.2
ATXN3-201ENST00000340660 ORC5O43913 435 aa7.53□□□□□ -1.2
ATXN3-201ENST00000340660 SELENOFO60613 162 aa7.53□□□□□ -1.2
ATXN3-201ENST00000340660 SAA2P0DJI9 122 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-201ENST00000340660 MYOD1P15172 320 aa7.53□□□□□ -1.2
ATXN3-201ENST00000340660 BLVRAP53004 296 aa7.53□□□□□ -1.2
ATXN3-201ENST00000340660 SELENOWP63302 87 aa7.53□□□□□ -1.2
ATXN3-201ENST00000340660 OXA1LQ15070 435 aa7.53□□□□□ -1.2
ATXN3-201ENST00000340660 ZNF497Q6ZNH5 498 aa7.53□□□□□ -1.2
ATXN3-201ENST00000340660 Q6ZNX1 250 aa7.53□□□□□ -1.2
ATXN3-201ENST00000340660 TRPT1Q86TN4 253 aaKnown RBP7.53□□□□□ -1.2
ATXN3-201ENST00000340660 CNIH3Q8TBE1 160 aa7.53□□□□□ -1.2
ATXN3-201ENST00000340660 CCDC107Q8WV48 283 aa7.53□□□□□ -1.2
ATXN3-201ENST00000340660 RFT1Q96AA3 541 aa7.53□□□□□ -1.2
ATXN3-201ENST00000340660 SULT4A1Q9BR01 284 aa7.53□□□□□ -1.2
ATXN3-201ENST00000340660 ABHD14AQ9BUJ0 271 aa7.53□□□□□ -1.2
ATXN3-201ENST00000340660 TXLNGYQ9BZA5 131 aa7.53□□□□□ -1.2
ATXN3-201ENST00000340660 CCDC167Q9P0B6 97 aa7.53□□□□□ -1.2
ATXN3-201ENST00000340660 UFC1Q9Y3C8 167 aa7.53□□□□□ -1.2
ATXN3-201ENST00000340660 ETV7Q9Y603 341 aa7.53□□□□□ -1.2
ATXN3-201ENST00000340660 IGHV3-35A0A0C4DH35 117 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 A0A1W2PRQ8 180 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 TRPC5OSA6NMA1 111 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 PRR32B1ATL7 298 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 RBBP9O75884 186 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 KRT36O76013 467 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 SOX14O95416 240 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 CT45A6P0DMU7 189 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 CT45A5P0DMU8 189 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 CT45A7P0DMV0 189 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 MAS1LP35410 378 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 RBP2P50120 134 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 GNG11P61952 73 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 HTD2P86397 168 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 DGCR6Q14129 220 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 HACD2Q6Y1H2 254 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 GBGT1Q8N5D6 347 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 MED20Q9H944 212 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 ZNF581Q9P0T4 197 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 ING4Q9UNL4 249 aa7.52□□□□□ -1.21
ATXN3-201ENST00000340660 IGKV1-9A0A0C4DH69 117 aa7.51□□□□□ -1.21
ATXN3-201ENST00000340660 OR5H14A6NHG9 310 aa7.51□□□□□ -1.21
ATXN3-201ENST00000340660 GATBO75879 557 aaKnown RBP7.51□□□□□ -1.21
ATXN3-201ENST00000340660 SPP1P10451 314 aa7.51□□□□□ -1.21
ATXN3-201ENST00000340660 KITP10721 976 aa7.51□□□□□ -1.21
ATXN3-201ENST00000340660 KCNJ3P48549 501 aa7.51□□□□□ -1.21
ATXN3-201ENST00000340660 MRPL19P49406 292 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms