RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 SPAG16Q8N0X2 631 aa18.54■□□□□ 0.56
PDLIM2-203ENST00000339162 YPEL2Q96QA6 119 aa18.54■□□□□ 0.56
PDLIM2-203ENST00000339162 PLEKHA2Q9HB19 425 aa18.54■□□□□ 0.56
PDLIM2-203ENST00000339162 CACNG5Q9UF02 275 aa18.54■□□□□ 0.56
PDLIM2-203ENST00000339162 TPT1P13693 172 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-203ENST00000339162 M6PRP20645 277 aa18.53■□□□□ 0.56
PDLIM2-203ENST00000339162 NHLH2Q02577 135 aa18.53■□□□□ 0.56
PDLIM2-203ENST00000339162 RPL39P5Q59GN2 51 aa18.53■□□□□ 0.56
PDLIM2-203ENST00000339162 BAP18Q8IXM2 172 aa18.53■□□□□ 0.56
PDLIM2-203ENST00000339162 C19orf12Q9NSK7 152 aa18.53■□□□□ 0.56
PDLIM2-203ENST00000339162 HCFC1P51610 2035 aa18.53■□□□□ 0.56
PDLIM2-203ENST00000339162 TANC2Q9HCD6 1990 aa18.53■□□□□ 0.56
PDLIM2-203ENST00000339162 KRASP01116 189 aa18.53■□□□□ 0.56
PDLIM2-203ENST00000339162 ID3Q02535 119 aa18.53■□□□□ 0.56
PDLIM2-203ENST00000339162 TOR2AQ5JU69 321 aa18.53■□□□□ 0.56
PDLIM2-203ENST00000339162 STOML3Q8TAV4 291 aa18.53■□□□□ 0.56
PDLIM2-203ENST00000339162 TMEM204Q9BSN7 226 aa18.53■□□□□ 0.56
PDLIM2-203ENST00000339162 NCOR1P1Q9H4R4 102 aa18.53■□□□□ 0.56
PDLIM2-203ENST00000339162 YLPM1P49750 1951 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-203ENST00000339162 FAM24AA6NFZ4 105 aa18.52■□□□□ 0.56
PDLIM2-203ENST00000339162 COL8A2P25067 703 aa18.52■□□□□ 0.56
PDLIM2-203ENST00000339162 PLA2G5P39877 138 aa18.52■□□□□ 0.56
PDLIM2-203ENST00000339162 CAV2P51636 162 aa18.52■□□□□ 0.56
PDLIM2-203ENST00000339162 CATR1Q13166 79 aa18.52■□□□□ 0.56
PDLIM2-203ENST00000339162 ZNF273Q14593 569 aa18.52■□□□□ 0.56
PDLIM2-203ENST00000339162 TMED6Q8WW62 240 aa18.52■□□□□ 0.56
PDLIM2-203ENST00000339162 S1PR2O95136 353 aa18.51■□□□□ 0.55
PDLIM2-203ENST00000339162 TMEM50AO95807 157 aa18.51■□□□□ 0.55
PDLIM2-203ENST00000339162 G6PCP35575 357 aa18.51■□□□□ 0.55
PDLIM2-203ENST00000339162 P2RY1P47900 373 aa18.51■□□□□ 0.55
PDLIM2-203ENST00000339162 PRAMEF5Q5TYX0 476 aa18.51■□□□□ 0.55
PDLIM2-203ENST00000339162 C1orf229Q6ZS94 237 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-203ENST00000339162 IFI27L2Q9H2X8 130 aa18.51■□□□□ 0.55
PDLIM2-203ENST00000339162 C11orf1Q9H5F2 150 aa18.51■□□□□ 0.55
PDLIM2-203ENST00000339162 GFOD1Q9NXC2 390 aa18.51■□□□□ 0.55
PDLIM2-203ENST00000339162 CTSZQ9UBR2 303 aa18.51■□□□□ 0.55
PDLIM2-203ENST00000339162 A0A1B0GU03 582 aa18.51■□□□□ 0.55
PDLIM2-203ENST00000339162 CHST1O43916 411 aa18.51■□□□□ 0.55
PDLIM2-203ENST00000339162 PITX3O75364 302 aa18.51■□□□□ 0.55
PDLIM2-203ENST00000339162 HFEQ30201 348 aa18.51■□□□□ 0.55
PDLIM2-203ENST00000339162 C4orf17Q53FE4 359 aa18.51■□□□□ 0.55
PDLIM2-203ENST00000339162 H1FXQ92522 213 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-203ENST00000339162 LSM10Q969L4 123 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-203ENST00000339162 GPR137BO60478 399 aa18.5■□□□□ 0.55
PDLIM2-203ENST00000339162 GNG10P50151 68 aa18.5■□□□□ 0.55
PDLIM2-203ENST00000339162 RPL31P62899 125 aaKnown RBP18.5■□□□□ 0.55
PDLIM2-203ENST00000339162 CT45A1Q5HYN5 189 aa18.5■□□□□ 0.55
PDLIM2-203ENST00000339162 NCR3LG1Q68D85 454 aa18.5■□□□□ 0.55
PDLIM2-203ENST00000339162 CT45A3Q8NHU0 189 aa18.5■□□□□ 0.55
PDLIM2-203ENST00000339162 ITLN2Q8WWU7 325 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-203ENST00000339162 PHYHIPLQ96FC7 376 aa18.5■□□□□ 0.55
PDLIM2-203ENST00000339162 TNFRSF13BO14836 293 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-203ENST00000339162 LY6HO94772 140 aa18.5■□□□□ 0.55
PDLIM2-203ENST00000339162 RRASP10301 218 aa18.5■□□□□ 0.55
PDLIM2-203ENST00000339162 CCL3L1P16619 93 aa18.5■□□□□ 0.55
PDLIM2-203ENST00000339162 PDZD9Q8IXQ8 264 aa18.5■□□□□ 0.55
PDLIM2-203ENST00000339162 OR2C3Q8N628 320 aa18.5■□□□□ 0.55
PDLIM2-203ENST00000339162 CACNA1BQ00975 2339 aa18.5■□□□□ 0.55
PDLIM2-203ENST00000339162 hADV38S2A0JD32 116 aa18.49■□□□□ 0.55
PDLIM2-203ENST00000339162 KIAA1324LA8MWY0 1029 aaPredicted RBP18.49■□□□□ 0.55
PDLIM2-203ENST00000339162 M0R1X1 148 aa18.49■□□□□ 0.55
PDLIM2-203ENST00000339162 WRBO00258 174 aa18.49■□□□□ 0.55
PDLIM2-203ENST00000339162 RBMXL1Q96E39 390 aaKnown RBP18.49■□□□□ 0.55
PDLIM2-203ENST00000339162 ABHD14AQ9BUJ0 271 aa18.49■□□□□ 0.55
PDLIM2-203ENST00000339162 WFDC1Q9HC57 220 aa18.49■□□□□ 0.55
PDLIM2-203ENST00000339162 IDI2-AS1Q9NZ38 188 aa18.49■□□□□ 0.55
PDLIM2-203ENST00000339162 ZNF729A6NN14 1252 aaPredicted RBP18.49■□□□□ 0.55
PDLIM2-203ENST00000339162 DVL1O14640 695 aa18.49■□□□□ 0.55
PDLIM2-203ENST00000339162 TAAR5O14804 337 aa18.49■□□□□ 0.55
PDLIM2-203ENST00000339162 PVALBP20472 110 aaPredicted RBP18.49■□□□□ 0.55
PDLIM2-203ENST00000339162 DUTP33316 252 aaKnown RBP18.49■□□□□ 0.55
PDLIM2-203ENST00000339162 VAMP2P63027 116 aa18.49■□□□□ 0.55
PDLIM2-203ENST00000339162 ZNF66Q6ZN08 573 aa18.49■□□□□ 0.55
PDLIM2-203ENST00000339162 HSD17B10Q99714 261 aaKnown RBP18.49■□□□□ 0.55
PDLIM2-203ENST00000339162 SLC25A32Q9H2D1 315 aa18.49■□□□□ 0.55
PDLIM2-203ENST00000339162 ZNRD1Q9P1U0 126 aa18.49■□□□□ 0.55
PDLIM2-203ENST00000339162 IGSF23A1L1A6 192 aa18.48■□□□□ 0.55
PDLIM2-203ENST00000339162 NDUFB3O43676 98 aa18.48■□□□□ 0.55
PDLIM2-203ENST00000339162 EWSR1Q01844 656 aaKnown RBP eCLIP18.48■□□□□ 0.55
PDLIM2-203ENST00000339162 GPR157Q5UAW9 335 aa18.48■□□□□ 0.55
PDLIM2-203ENST00000339162 CORO2AQ92828 525 aa18.48■□□□□ 0.55
PDLIM2-203ENST00000339162 USP24Q9UPU5 2620 aa18.48■□□□□ 0.55
PDLIM2-203ENST00000339162 H3BP45 60 aa18.47■□□□□ 0.55
PDLIM2-203ENST00000339162 MSMO1Q15800 293 aa18.47■□□□□ 0.55
PDLIM2-203ENST00000339162 TMEM200BQ69YZ2 307 aa18.47■□□□□ 0.55
PDLIM2-203ENST00000339162 LINC00312Q9Y6C7 94 aa18.47■□□□□ 0.55
PDLIM2-203ENST00000339162 PIGBOS1A0A0B4J2F0 54 aa18.47■□□□□ 0.55
PDLIM2-203ENST00000339162 SOD3P08294 240 aa18.47■□□□□ 0.55
PDLIM2-203ENST00000339162 SLC25A6P12236 298 aa18.47■□□□□ 0.55
PDLIM2-203ENST00000339162 FCGR3BO75015 233 aa18.46■□□□□ 0.55
PDLIM2-203ENST00000339162 FBXO24O75426 580 aa18.46■□□□□ 0.55
PDLIM2-203ENST00000339162 PAX9P55771 341 aa18.46■□□□□ 0.55
PDLIM2-203ENST00000339162 LRRC10Q5BKY1 277 aa18.46■□□□□ 0.55
PDLIM2-203ENST00000339162 RAB9BQ9NP90 201 aa18.46■□□□□ 0.55
PDLIM2-203ENST00000339162 LYRM2Q9NU23 88 aaPredicted RBP18.46■□□□□ 0.55
PDLIM2-203ENST00000339162 MMP24Q9Y5R2 645 aa18.46■□□□□ 0.55
PDLIM2-203ENST00000339162 A0A1W2PPR1 153 aa18.46■□□□□ 0.55
PDLIM2-203ENST00000339162 C19orf84I3L1E1 186 aa18.46■□□□□ 0.55
PDLIM2-203ENST00000339162 CST7O76096 145 aa18.46■□□□□ 0.55
PDLIM2-203ENST00000339162 ODF3L1Q8IXM7 274 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms