RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 TMEM272A0A1B0GTI8 110 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 A0A1W2PN81 502 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 H7C2Y5 167 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 LDLRAD4O15165 306 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 CHRNA7P36544 502 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 SLURP1P55000 103 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 OR10A3P58181 314 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 HLA-DRB3P79483 266 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 MLLT11Q13015 90 aaPredicted RBP10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 FHL3Q13643 280 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 PSG5Q15238 335 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 SSX1Q16384 188 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 C19orf54Q5BKX5 351 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 C9orf66Q5T8R8 295 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 ZNF383Q8NA42 475 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 MAFIPQ8WZ33 124 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 DLX4Q92988 240 aaPredicted RBP10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 UBE2E2Q96LR5 201 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 CMSS1Q9BQ75 279 aaKnown RBP10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 ISYNA1Q9NPH2 558 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 TPSG1Q9NRR2 321 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 VSIG4Q9Y279 399 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 HSPA12AO43301 675 aa10.35□□□□□ -0.75
NUDCD3-201ENST00000338427 DENRO43583 198 aaKnown RBP10.35□□□□□ -0.75
NUDCD3-201ENST00000338427 IGHV3-11P01762 117 aa10.35□□□□□ -0.75
NUDCD3-201ENST00000338427 GSTT2P0CG29 244 aa10.35□□□□□ -0.75
NUDCD3-201ENST00000338427 GSTT2BP0CG30 244 aa10.35□□□□□ -0.75
NUDCD3-201ENST00000338427 PLGLAQ15195 96 aa10.35□□□□□ -0.75
NUDCD3-201ENST00000338427 IGSF11Q5DX21 431 aa10.35□□□□□ -0.75
NUDCD3-201ENST00000338427 ZNF660Q6AZW8 331 aaPredicted RBP10.35□□□□□ -0.75
NUDCD3-201ENST00000338427 PPP1R27Q86WC6 154 aa10.35□□□□□ -0.75
NUDCD3-201ENST00000338427 OR5AN1Q8NGI8 311 aa10.35□□□□□ -0.75
NUDCD3-201ENST00000338427 ABHD5Q8WTS1 349 aa10.35□□□□□ -0.75
NUDCD3-201ENST00000338427 CNBD2Q96M20 576 aa10.35□□□□□ -0.75
NUDCD3-201ENST00000338427 RIMS4Q9H426 269 aaPredicted RBP10.35□□□□□ -0.75
NUDCD3-201ENST00000338427 ZNF230Q9UIE0 474 aaPredicted RBP10.35□□□□□ -0.75
NUDCD3-201ENST00000338427 ZNF580Q9UK33 172 aa10.35□□□□□ -0.75
NUDCD3-201ENST00000338427 ELF5Q9UKW6 265 aaPredicted RBP10.35□□□□□ -0.75
NUDCD3-201ENST00000338427 HSF4Q9ULV5 492 aa10.35□□□□□ -0.75
NUDCD3-201ENST00000338427 V9GY05 133 aa10.35□□□□□ -0.75
NUDCD3-201ENST00000338427 RYR3Q15413 4870 aa10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 A0A075B6Q4 140 aa10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 SMIM30A4D0T7 59 aa10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 TRDCB7Z8K6 153 aa10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 RAMP3O60896 148 aa10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 IGKV1-16P04430 117 aa10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 OR5H8P0DN80 308 aa10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 ZBTB25P24278 435 aa10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 RPS16P62249 146 aaKnown RBP10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 ZNF616Q08AN1 781 aa10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 PJVKQ0ZLH3 352 aa10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 UNQ5815/PRO19632Q6UWF5 114 aa10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 PRSS48Q7RTY5 328 aa10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 LFNGQ8NES3 379 aa10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 C5orf30Q96GV9 206 aa10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 CHCHD6Q9BRQ6 235 aa10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 RDH8Q9NYR8 311 aa10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 METTL1Q9UBP6 276 aaKnown RBP10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 WASHC3Q9Y3C0 194 aa10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 NBEAL2Q6ZNJ1 2754 aa10.34□□□□□ -0.75
NUDCD3-201ENST00000338427 IGHV4OR15-8A0A075B7B6 117 aa10.33□□□□□ -0.76
NUDCD3-201ENST00000338427 A0A087WW49 117 aa10.33□□□□□ -0.76
NUDCD3-201ENST00000338427 J3QRK9 145 aa10.33□□□□□ -0.76
NUDCD3-201ENST00000338427 ITGB1BP1O14713 200 aa10.33□□□□□ -0.76
NUDCD3-201ENST00000338427 ARPC1BO15143 372 aaKnown RBP10.33□□□□□ -0.76
NUDCD3-201ENST00000338427 ARL6IP5O75915 188 aa10.33□□□□□ -0.76
NUDCD3-201ENST00000338427 LY86O95711 162 aa10.33□□□□□ -0.76
NUDCD3-201ENST00000338427 CA2P00918 260 aa10.33□□□□□ -0.76
NUDCD3-201ENST00000338427 OR8U9P0C7N5 309 aa10.33□□□□□ -0.76
NUDCD3-201ENST00000338427 GNB3P16520 340 aa10.33□□□□□ -0.76
NUDCD3-201ENST00000338427 MC5RP33032 325 aa10.33□□□□□ -0.76
NUDCD3-201ENST00000338427 RUNX1Q01196 453 aa10.33□□□□□ -0.76
NUDCD3-201ENST00000338427 FAM71F2Q6NXP2 309 aa10.33□□□□□ -0.76
NUDCD3-201ENST00000338427 IZUMO2Q6UXV1 221 aa10.33□□□□□ -0.76
NUDCD3-201ENST00000338427 MOB1BQ7L9L4 216 aa10.33□□□□□ -0.76
NUDCD3-201ENST00000338427 OR5T1Q8NG75 326 aa10.33□□□□□ -0.76
NUDCD3-201ENST00000338427 PTX4Q96A99 478 aa10.33□□□□□ -0.76
NUDCD3-201ENST00000338427 TOLLIPQ9H0E2 274 aa10.33□□□□□ -0.76
NUDCD3-201ENST00000338427 RAB22AQ9UL26 194 aa10.33□□□□□ -0.76
NUDCD3-201ENST00000338427 IGKV1D-8A0A087WSZ0 117 aa10.32□□□□□ -0.76
NUDCD3-201ENST00000338427 OR5H14A6NHG9 310 aa10.32□□□□□ -0.76
NUDCD3-201ENST00000338427 M0R1X1 148 aa10.32□□□□□ -0.76
NUDCD3-201ENST00000338427 OVOL1O14753 267 aa10.32□□□□□ -0.76
NUDCD3-201ENST00000338427 BET1O15155 118 aa10.32□□□□□ -0.76
NUDCD3-201ENST00000338427 SSBP2P81877 361 aaPredicted RBP10.32□□□□□ -0.76
NUDCD3-201ENST00000338427 TRAM1Q15629 374 aa10.32□□□□□ -0.76
NUDCD3-201ENST00000338427 HAPLN4Q86UW8 402 aa10.32□□□□□ -0.76
NUDCD3-201ENST00000338427 NR2C2APQ86WQ0 139 aa10.32□□□□□ -0.76
NUDCD3-201ENST00000338427 OR56B1Q8NGI3 324 aa10.32□□□□□ -0.76
NUDCD3-201ENST00000338427 ACOT13Q9NPJ3 140 aa10.32□□□□□ -0.76
NUDCD3-201ENST00000338427 C12orf4Q9NQ89 552 aa10.32□□□□□ -0.76
NUDCD3-201ENST00000338427 ZNF221Q9UK13 617 aa10.32□□□□□ -0.76
NUDCD3-201ENST00000338427 FOXA2Q9Y261 457 aaPredicted RBP10.32□□□□□ -0.76
NUDCD3-201ENST00000338427 SRRM4A7MD48 611 aaKnown RBP10.31□□□□□ -0.76
NUDCD3-201ENST00000338427 FABP7O15540 132 aa10.31□□□□□ -0.76
NUDCD3-201ENST00000338427 SLC25A17O43808 307 aa10.31□□□□□ -0.76
NUDCD3-201ENST00000338427 TFAP2AP05549 437 aa10.31□□□□□ -0.76
NUDCD3-201ENST00000338427 OR8U8P0C7N1 319 aa10.31□□□□□ -0.76
NUDCD3-201ENST00000338427 CRIP2P52943 208 aaPredicted RBP10.31□□□□□ -0.76
NUDCD3-201ENST00000338427 DEFA5Q01523 94 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms