RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 MIDNQ504T8 468 aa7.87□□□□□ -1.15
FNDC3B-201ENST00000336824 SMIM15Q7Z3B0 74 aa7.87□□□□□ -1.15
FNDC3B-201ENST00000336824 OR5R1Q8NH85 324 aa7.87□□□□□ -1.15
FNDC3B-201ENST00000336824 DTD1Q8TEA8 209 aa7.87□□□□□ -1.15
FNDC3B-201ENST00000336824 TMEM222Q9H0R3 208 aa7.87□□□□□ -1.15
FNDC3B-201ENST00000336824 ZNF319Q9P2F9 582 aa7.87□□□□□ -1.15
FNDC3B-201ENST00000336824 POMT1Q9Y6A1 747 aa7.87□□□□□ -1.15
FNDC3B-201ENST00000336824 PCNTO95613 3336 aa7.87□□□□□ -1.15
FNDC3B-201ENST00000336824 CORTO00230 105 aa7.87□□□□□ -1.15
FNDC3B-201ENST00000336824 SNAPINO95295 136 aa7.87□□□□□ -1.15
FNDC3B-201ENST00000336824 TMEM11P17152 192 aa7.87□□□□□ -1.15
FNDC3B-201ENST00000336824 S100A2P29034 98 aa7.87□□□□□ -1.15
FNDC3B-201ENST00000336824 OVCH2Q7RTZ1 564 aa7.87□□□□□ -1.15
FNDC3B-201ENST00000336824 A0A1W2PPE3 182 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 SNRNP70P08621 437 aaKnown RBP7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 IL22RA2Q969J5 263 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 BTF3L4Q96K17 158 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 NIPSNAP3BQ9BS92 247 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 CD74P04233 296 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 SSTR5P35346 364 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 PAQR4Q8N4S7 273 aaPredicted RBP7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 SIRT7Q9NRC8 400 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 MMP9P14780 707 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 NPY1RP25929 384 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 BPIFCQ8NFQ6 507 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 RNF2Q99496 336 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 SERTAD4Q9NUC0 356 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 PLCE1Q9P212 2302 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 SOHLH1Q5JUK2 328 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 KCNIP4Q6PIL6 250 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 SVBPQ8N300 66 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 GPR132Q9UNW8 380 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 IGKV1-9A0A0C4DH69 117 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 ADAP1O75689 374 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 CLEC3BP05452 202 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 NPBWR1P48145 328 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 LCN2P80188 198 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 PLAC9Q5JTB6 97 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 OR2T10Q8NGZ9 312 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 MARC2Q969Z3 335 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 SRRM5B3KS81 715 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 RPL8P62917 257 aaKnown RBP7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 TMEM231Q9H6L2 316 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 NPDC1Q9NQX5 325 aaPredicted RBP7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 PLSCR2Q9NRY7 297 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 MMP24Q9Y5R2 645 aa7.86□□□□□ -1.15
FNDC3B-201ENST00000336824 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.85□□□□□ -1.157e-8■■■■■ 31.3
FNDC3B-201ENST00000336824 KRBOX1C9JBD0 128 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 J3QKU1 62 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 NUPL2O15504 423 aaKnown RBP7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 OPN1MWP04001 364 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 ACAA1P09110 424 aaPredicted RBP7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 OPN1MW2P0DN77 364 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 OPN1MW3P0DN78 364 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 POLR2GP62487 172 aaKnown RBP eCLIP7.85□□□□□ -1.158e-7■■□□□ 14
FNDC3B-201ENST00000336824 PNKDQ8N490 385 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 GNG7O60262 68 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 LYZL2Q7Z4W2 148 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 TMED6Q8WW62 240 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 AAMDCQ9H7C9 122 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 OR1A1Q9P1Q5 309 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 CHST1O43916 411 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 PGLYRP1O75594 196 aaPredicted RBP7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 UBE2G1P62253 170 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 SSX2Q16385 188 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 FFAR4Q5NUL3 377 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 ZNF497Q6ZNH5 498 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 LRP11Q86VZ4 500 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 WDR31Q8NA23 367 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 SUN5Q8TC36 379 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 DPM3Q9P2X0 92 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 TIMM9Q9Y5J7 89 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 U3KQ87 197 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 AGAP20933 346 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 RPL27AP46776 148 aaKnown RBP7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 UBE2KP61086 200 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 TIGITQ495A1 244 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 FAM216BQ8N7L0 139 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 ST8SIA2Q92186 375 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 ATP5SQ99766 215 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 GSX2Q9BZM3 304 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 METTL1Q9UBP6 276 aaKnown RBP7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 FBP1P09467 338 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 OR13C7P0DN81 318 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 HTD2P86397 168 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 CEP350Q5VT06 3117 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 TNRC6BQ9UPQ9 1833 aaKnown RBP7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 FAM90A26D6RGX4 464 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 ZP1P60852 638 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 SPCS3P61009 180 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 ZNF146Q15072 292 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 DNM1P46Q6ZS02 220 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 RHOVQ96L33 236 aa7.85□□□□□ -1.15
FNDC3B-201ENST00000336824 FAM208BQ5VWN6 2430 aa7.84□□□□□ -1.15
FNDC3B-201ENST00000336824 MBPP02686 304 aaPredicted RBP7.84□□□□□ -1.15
FNDC3B-201ENST00000336824 CT45A10P0DMU9 189 aa7.84□□□□□ -1.15
FNDC3B-201ENST00000336824 TMEM255AQ5JRV8 349 aa7.84□□□□□ -1.15
FNDC3B-201ENST00000336824 ZNF787Q6DD87 383 aa7.84□□□□□ -1.15
FNDC3B-201ENST00000336824 FAM122CQ6P4D5 195 aa7.84□□□□□ -1.15
FNDC3B-201ENST00000336824 HSD17B13Q7Z5P4 300 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms