RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 OR9G9P0C7N8 305 aa7.34□□□□□ -1.24
TDP1-201ENST00000335725 FASLGP48023 281 aa7.34□□□□□ -1.24
TDP1-201ENST00000335725 TMEM187Q14656 261 aa7.34□□□□□ -1.24
TDP1-201ENST00000335725 OOSP2Q86WS3 158 aa7.34□□□□□ -1.24
TDP1-201ENST00000335725 TPRX1Q8N7U7 411 aa7.34□□□□□ -1.24
TDP1-201ENST00000335725 WDR34Q96EX3 536 aa7.34□□□□□ -1.24
TDP1-201ENST00000335725 DGAT2Q96PD7 388 aa7.34□□□□□ -1.24
TDP1-201ENST00000335725 DUX5Q96PT3 197 aa7.34□□□□□ -1.24
TDP1-201ENST00000335725 UCN2Q96RP3 112 aa7.34□□□□□ -1.24
TDP1-201ENST00000335725 VN1R3Q9BXE9 311 aa7.34□□□□□ -1.24
TDP1-201ENST00000335725 WDR76Q9H967 626 aa7.34□□□□□ -1.24
TDP1-201ENST00000335725 MED29Q9NX70 200 aa7.34□□□□□ -1.24
TDP1-201ENST00000335725 ZNF831Q5JPB2 1677 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 DOCK6Q96HP0 2047 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 CENPVL3A0A0U1RRI6 287 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 WIPF3A6NGB9 483 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 PRR32B1ATL7 298 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 CATR1Q13166 79 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 ZNF766Q5HY98 468 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 TMEM215Q68D42 235 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 ZNF841Q6ZN19 808 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 DOK3Q7L591 496 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 OR4A16Q8NH70 328 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 ZNRF4Q8WWF5 429 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 NMNAT3Q96T66 252 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 RTN4RQ9BZR6 473 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 VWC2LB2RUY7 222 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 F5H5K5 113 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 SOX1O00570 391 aaPredicted RBP7.33□□□□□ -1.24
TDP1-201ENST00000335725 TM4SF1P30408 202 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 SNU13P55769 128 aaKnown RBP7.33□□□□□ -1.24
TDP1-201ENST00000335725 ATP5G2Q06055 141 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 LYZL2Q7Z4W2 148 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 FAM19A2Q8N3H0 131 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 ZADH2Q8N4Q0 377 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 GCSAMQ8N6F7 178 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 OR5D13Q8NGL4 314 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 C18orf12Q96KH6 178 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 SMIM14Q96QK8 99 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 PAAF1Q9BRP4 392 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 PELI2Q9HAT8 420 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 DOCK8Q8NF50 2099 aa7.33□□□□□ -1.24
TDP1-201ENST00000335725 KIR2DS5A0A0G2JLQ3 304 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 A0A0G2JNG1 304 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 A0A1B0GTH9 108 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 C3orf80F5H4A9 247 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 SOCS1O15524 211 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 UQCRFS1P47985 274 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 KIR2DS5Q14953 304 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 ZNF683Q8IZ20 524 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 SLC22A24Q8N4F4 322 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 TMEM54Q969K7 222 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 ADAT3Q96EY9 351 aaPredicted RBP7.32□□□□□ -1.24
TDP1-201ENST00000335725 A0A1W2PRE2 83 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 CST7O76096 145 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 HLA-DQA1P01909 254 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 NCBP2P52298 156 aaKnown RBP eCLIP7.32□□□□□ -1.241e-7■■■■□ 26
TDP1-201ENST00000335725 EMC4Q5J8M3 183 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 Q6ZUT4 128 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 OR4C3Q8NH37 302 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 ZNF721Q8TF20 911 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 GLIPR2Q9H4G4 154 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 C11orf1Q9H5F2 150 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 XIRP1Q702N8 1843 aaKnown RBP7.32□□□□□ -1.24
TDP1-201ENST00000335725 SCN5AQ14524 2016 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 TRGV10A0A0A0MS01 117 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 TIMP1P01033 207 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 LINC01590Q5TEZ4 76 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 KCNG3Q8TAE7 436 aa7.32□□□□□ -1.24
TDP1-201ENST00000335725 CENPVL1A0A0U1RR11 272 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 TMEM8BA6NDV4 472 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 ZNF878C9JN71 531 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 ZNF136P52737 540 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 RPEL1Q2QD12 228 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 C1orf140Q5VVS0 124 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 TMEM25Q86YD3 366 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 TMEM86AQ8N2M4 240 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 PPP1R35Q8TAP8 253 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 ZNF502Q8TBZ5 544 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 ST6GALNAC5Q9BVH7 336 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 MRIQ9BWK5 157 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 NXT1Q9UKK6 140 aaKnown RBP7.31□□□□□ -1.24
TDP1-201ENST00000335725 ZNF835Q9Y2P0 537 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 LINC00312Q9Y6C7 94 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 PLXNA1Q9UIW2 1896 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 LRRC30A6NM36 301 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 PHF1O43189 567 aaPredicted RBP7.31□□□□□ -1.24
TDP1-201ENST00000335725 COX8AP10176 69 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 PRTN3P24158 256 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 PSG4Q00888 419 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 ZNF726P1Q15940 193 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 CDKN3Q16667 212 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 ITPRIPL2Q3MIP1 535 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 DNAJC30Q96LL9 226 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 OXGR1Q96P68 337 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 COL25A1Q9BXS0 654 aaPredicted RBP7.31□□□□□ -1.24
TDP1-201ENST00000335725 HRASLS2Q9NWW9 162 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 SELENOKQ9Y6D0 94 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 TNRC6AQ8NDV7 1962 aaKnown RBP7.31□□□□□ -1.24
TDP1-201ENST00000335725 CRXO43186 299 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms