RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 TRAV34A0A0B4J273 112 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 RHBDL1O75783 438 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 DTYMKP23919 212 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 ARG2P78540 354 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 COLCA1Q6ZS62 124 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 ZDHHC23Q8IYP9 409 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 SPSB4Q96A44 273 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 RNF150Q9ULK6 438 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 GRIFINA4D1Z8 144 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 PPYP01298 95 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 PFN1P07737 140 aaKnown RBP11.78□□□□□ -0.52
SF1-202ENST00000334944 SLC25A24Q6NUK1 477 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 C20orf204Q6ZNR8 217 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 RSG1Q9BU20 258 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 SPRR3Q9UBC9 169 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 CADP27708 2225 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 IGKV1D-13A0A0B4J2D9 117 aa11.77□□□□□ -0.53
SF1-202ENST00000334944 CD300LBA8K4G0 201 aa11.77□□□□□ -0.53
SF1-202ENST00000334944 C21orf140B9A014 251 aa11.77□□□□□ -0.53
SF1-202ENST00000334944 PROB1E7EW31 1015 aa11.77□□□□□ -0.53
SF1-202ENST00000334944 IGKV1-13P0DP09 117 aa11.77□□□□□ -0.53
SF1-202ENST00000334944 POM121L2Q96KW2 1035 aa11.77□□□□□ -0.53
SF1-202ENST00000334944 SMIM7Q9BQ49 75 aa11.77□□□□□ -0.53
SF1-202ENST00000334944 M0QZK8 103 aa11.77□□□□□ -0.53
SF1-202ENST00000334944 GGCTO75223 188 aaKnown RBP11.77□□□□□ -0.53
SF1-202ENST00000334944 PLA2G2CQ5R387 149 aa11.77□□□□□ -0.53
SF1-202ENST00000334944 APOBEC3DQ96AK3 386 aaPredicted RBP11.77□□□□□ -0.53
SF1-202ENST00000334944 B4DEV8 164 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 TMEM50AO95807 157 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 CRYABP02511 175 aaKnown RBP11.76□□□□□ -0.53
SF1-202ENST00000334944 CDKN1AP38936 164 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 PLP2Q04941 152 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 ZNF266Q14584 549 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 MDP1Q86V88 176 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 TMEM252Q8N6L7 170 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 VN1R17PQ8TDU5 208 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 IL1F10Q8WWZ1 152 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 ZNF391Q9UJN7 358 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 PTPRZ1P23471 2315 aaPredicted RBP11.76□□□□□ -0.53
SF1-202ENST00000334944 C20orf202A1L168 122 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 TRAPPC2LH3BP13 241 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 H7BYZ3 331 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 NKX2-8O15522 239 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 OR10J1P30954 320 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 GNRHRP30968 328 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 TESK1Q15569 626 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 STPG4Q8N801 248 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 MOB3AQ96BX8 217 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 PARD6GQ9BYG4 376 aaPredicted RBP11.76□□□□□ -0.53
SF1-202ENST00000334944 DECR2Q9NUI1 292 aa11.76□□□□□ -0.53
SF1-202ENST00000334944 GCH1P30793 250 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 CEACAM21Q3KPI0 293 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 ZNF787Q6DD87 383 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 MSI2Q96DH6 328 aaKnown RBP11.75□□□□□ -0.53
SF1-202ENST00000334944 SMG1Q96Q15 3661 aaKnown RBP11.75□□□□□ -0.53
SF1-202ENST00000334944 M0QZ24 198 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 LYZL6O75951 148 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 CCL11P51671 97 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 IL13RA2Q14627 380 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 IZUMO4Q1ZYL8 232 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 ALKBH6Q3KRA9 238 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 DPPA3Q6W0C5 159 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 LIAT1Q6ZQX7 453 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 ZNF818PQ6ZRF7 136 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 GAPTQ8N292 157 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 OR51G1Q8NGK1 321 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 TMEM170AQ8WVE7 144 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 LINC00470Q9BZP3 86 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 RPRMQ9NS64 109 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 IGKV1-6A0A0C4DH72 117 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 KLRC4-KLRK1H3BQV0 150 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 BCL2P10415 239 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 COA6Q5JTJ3 125 aaKnown RBP11.75□□□□□ -0.53
SF1-202ENST00000334944 TBC1D26Q86UD7 250 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 MDS2Q8NDY4 140 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 OR5B12Q96R08 314 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 MIEN1Q9BRT3 115 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 CCL28Q9NRJ3 127 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 IL36GQ9NZH8 169 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 ZFP30Q9Y2G7 519 aa11.75□□□□□ -0.53
SF1-202ENST00000334944 UBE2J1Q9Y385 318 aaPredicted RBP11.75□□□□□ -0.53
SF1-202ENST00000334944 SPAARA0A1B0GVQ0 90 aa11.74□□□□□ -0.53
SF1-202ENST00000334944 SLC22A20A6NK97 555 aa11.74□□□□□ -0.53
SF1-202ENST00000334944 CHRNA7P36544 502 aa11.74□□□□□ -0.53
SF1-202ENST00000334944 ZNF766Q5HY98 468 aa11.74□□□□□ -0.53
SF1-202ENST00000334944 MKXQ8IYA7 352 aa11.74□□□□□ -0.53
SF1-202ENST00000334944 RBKSQ9H477 322 aa11.74□□□□□ -0.53
SF1-202ENST00000334944 KLF13Q9Y2Y9 288 aaPredicted RBP11.74□□□□□ -0.53
SF1-202ENST00000334944 C3orf85A0A1B0GTC6 90 aa11.74□□□□□ -0.53
SF1-202ENST00000334944 MPPED1O15442 326 aa11.74□□□□□ -0.53
SF1-202ENST00000334944 NXPH2O95156 264 aa11.74□□□□□ -0.53
SF1-202ENST00000334944 NKX2-1P43699 371 aaPredicted RBP11.74□□□□□ -0.53
SF1-202ENST00000334944 CNN1P51911 297 aaKnown RBP11.74□□□□□ -0.53
SF1-202ENST00000334944 FGF12P61328 243 aa11.74□□□□□ -0.53
SF1-202ENST00000334944 LEMD1Q68G75 181 aa11.74□□□□□ -0.53
SF1-202ENST00000334944 TCF23Q7RTU1 214 aa11.74□□□□□ -0.53
SF1-202ENST00000334944 ODF3L1Q8IXM7 274 aa11.74□□□□□ -0.53
SF1-202ENST00000334944 TMEM9BQ9NQ34 198 aa11.74□□□□□ -0.53
SF1-202ENST00000334944 TNRC6AQ8NDV7 1962 aaKnown RBP11.74□□□□□ -0.53
SF1-202ENST00000334944 ATMQ13315 3056 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms