RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 CTLA4P16410 223 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 PRSS8Q16651 343 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 CDC42EP2O14613 210 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 EDIL3O43854 480 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 BGLAPP02818 100 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 C1QTNF9P0C862 333 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 GAGE13Q4V321 117 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 KHDC1LQ5JSQ8 128 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 INO80CQ6PI98 192 aaPredicted RBP4.8□□□□□ -1.64
PTPRB-202ENST00000334414 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.8□□□□□ -1.64
PTPRB-202ENST00000334414 A0A0U1RQS6 177 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 MT-CO3P00414 261 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 PPBPP02775 128 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 SFTPCP11686 197 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 ERVK11-1P61568 191 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 PMVKQ15126 192 aa4.8□□□□□ -1.64
PTPRB-202ENST00000334414 ANKRD36A6QL64 1941 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 IGHV1-69-2A0A0G2JMI3 117 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 A8MWV9 139 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 SLURP2P0DP57 97 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 PAX1P15863 534 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 CDAP32320 146 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 ZNF418Q8TF45 676 aaPredicted RBP4.79□□□□□ -1.64
PTPRB-202ENST00000334414 WDR54Q9H977 334 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 FGF22Q9HCT0 170 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 CCL28Q9NRJ3 127 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 RNF7Q9UBF6 113 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 MOSPD3O75425 235 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 SELENOHQ8IZQ5 122 aaKnown RBP4.79□□□□□ -1.64
PTPRB-202ENST00000334414 ABHD3Q8WU67 409 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 ADAMTS7Q9UKP4 1686 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 MARCH11A6NNE9 402 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 KLK2P20151 261 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 FGF12P61328 243 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 DCAF12L2Q5VW00 463 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 TIMP4Q99727 224 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 CXCL16Q9H2A7 254 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 TMEM56-RWDD3S4R434 201 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 ASAH2BP0C7U1 165 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 ZNF32P17041 273 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 PARP14Q460N5 1801 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 TCTN1Q2MV58 587 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 C2orf68Q2NKX9 166 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 LHFPL4Q7Z7J7 247 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 CLDND2Q8NHS1 167 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 GATAD1Q8WUU5 269 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 TMEM101Q96IK0 257 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 TRBV5-7A0A0A0MS05 114 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 DEFB108AA8MXU0 73 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 B4GALNT1Q00973 533 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 RHBDD2Q6NTF9 364 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 APCDD1LQ8NCL9 501 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 GEMIN7Q9H840 131 aaKnown RBP4.79□□□□□ -1.64
PTPRB-202ENST00000334414 NXT2Q9NPJ8 142 aaKnown RBP4.79□□□□□ -1.64
PTPRB-202ENST00000334414 MMP17Q9ULZ9 603 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.79□□□□□ -1.64
PTPRB-202ENST00000334414 A0A1W2PNR3 127 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 F12P00748 615 aaPredicted RBP4.79□□□□□ -1.64
PTPRB-202ENST00000334414 ORMDL2Q53FV1 153 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 WIPI1Q5MNZ9 446 aaPredicted RBP4.79□□□□□ -1.64
PTPRB-202ENST00000334414 EBLN2Q6P2I7 272 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 NUDT8Q8WV74 236 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 RAB1CQ92928 201 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 VSTM2LQ96N03 204 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 ZNF236Q9UL36 1845 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 A0A1B0GTH9 108 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 TMEM252Q8N6L7 170 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 ANKRD10Q9NXR5 420 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 K7ESM1 405 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 ATXN8Q156A1 80 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 NDUFA2O43678 99 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 POU2AF1Q16633 256 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 TBR1Q16650 682 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 GPR146Q96CH1 333 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 CLEC5AQ9NY25 188 aa4.79□□□□□ -1.64
PTPRB-202ENST00000334414 RALGAPA2Q2PPJ7 1873 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 TMEM238C9JI98 176 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 F2RL2O00254 374 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 ANKRD34AQ69YU3 496 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 FAM222BQ8WU58 562 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 LOXL2Q9Y4K0 774 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 KLKB1P03952 638 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 TMIGD3P0DMS9 266 aaPredicted RBP4.78□□□□□ -1.64
PTPRB-202ENST00000334414 PLNP26678 52 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 SSBP2P81877 361 aaPredicted RBP4.78□□□□□ -1.64
PTPRB-202ENST00000334414 SSPNQ14714 243 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 CADM4Q8NFZ8 388 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 TMEM106BQ9NUM4 274 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 LOC389332A0A1B0GUA5 103 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.78□□□□□ -1.64
PTPRB-202ENST00000334414 H7C2G1 150 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 HYAL3O43820 417 aaPredicted RBP4.78□□□□□ -1.64
PTPRB-202ENST00000334414 HMGA1P17096 107 aaKnown RBP4.78□□□□□ -1.64
PTPRB-202ENST00000334414 ZNF793Q6ZN11 406 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 NPCDR1Q9BY65 106 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 C5orf66Q9H5L9 145 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 RRHO14718 337 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 LIMS1P48059 325 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 GZMMP51124 257 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 ZNF137PP52743 207 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms