RNA–Protein interactions for RNA: ENST00000332175.12

PTPRM-201, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRM, Length 6,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-201ENST00000332175 CFHR5Q9BXR6 569 aa19.26■□□□□ 0.67
PTPRM-201ENST00000332175 MRPS18AQ9NVS2 196 aaKnown RBP19.26■□□□□ 0.67
PTPRM-201ENST00000332175 A0A1W2PQM1 296 aa19.25■□□□□ 0.67
PTPRM-201ENST00000332175 COX19Q49B96 90 aa19.25■□□□□ 0.67
PTPRM-201ENST00000332175 IFITM10A6NMD0 228 aa19.25■□□□□ 0.67
PTPRM-201ENST00000332175 ZIC3O60481 467 aa19.25■□□□□ 0.67
PTPRM-201ENST00000332175 PAM16Q9Y3D7 125 aa19.25■□□□□ 0.67
PTPRM-201ENST00000332175 LHFPL6Q9Y693 200 aa19.25■□□□□ 0.67
PTPRM-201ENST00000332175 H7C2G1 150 aa19.25■□□□□ 0.67
PTPRM-201ENST00000332175 PGLYRP1O75594 196 aaPredicted RBP19.25■□□□□ 0.67
PTPRM-201ENST00000332175 NDUFB4O95168 129 aa19.25■□□□□ 0.67
PTPRM-201ENST00000332175 HOXA6P31267 233 aa19.25■□□□□ 0.67
PTPRM-201ENST00000332175 OR2A4O95047 310 aa19.25■□□□□ 0.67
PTPRM-201ENST00000332175 MEOX2P50222 304 aa19.25■□□□□ 0.67
PTPRM-201ENST00000332175 MFAP2P55001 183 aa19.25■□□□□ 0.67
PTPRM-201ENST00000332175 EIF4EBP2Q13542 120 aaPredicted RBP19.25■□□□□ 0.67
PTPRM-201ENST00000332175 VKORC1L1Q8N0U8 176 aa19.25■□□□□ 0.67
PTPRM-201ENST00000332175 ABHD12Q8N2K0 398 aa19.25■□□□□ 0.67
PTPRM-201ENST00000332175 SYT8Q8NBV8 401 aa19.25■□□□□ 0.67
PTPRM-201ENST00000332175 OR2A7Q96R45 310 aa19.25■□□□□ 0.67
PTPRM-201ENST00000332175 A0A1W2PS18 150 aa19.25■□□□□ 0.67
PTPRM-201ENST00000332175 SEC11BP0C7V7 166 aa19.25■□□□□ 0.67
PTPRM-201ENST00000332175 LOC105371242A0A075B767 164 aa19.24■□□□□ 0.67
PTPRM-201ENST00000332175 EIF3GO75821 320 aaKnown RBP eCLIP19.24■□□□□ 0.67
PTPRM-201ENST00000332175 ZNF250P15622 560 aa19.24■□□□□ 0.67
PTPRM-201ENST00000332175 MIC13Q5XKP0 118 aa19.24■□□□□ 0.67
PTPRM-201ENST00000332175 H3BTX0 84 aa19.24■□□□□ 0.67
PTPRM-201ENST00000332175 ERGP11308 486 aa19.24■□□□□ 0.67
PTPRM-201ENST00000332175 RND2P52198 227 aa19.24■□□□□ 0.67
PTPRM-201ENST00000332175 CYB561D1Q8N8Q1 229 aa19.24■□□□□ 0.67
PTPRM-201ENST00000332175 MIEN1Q9BRT3 115 aa19.24■□□□□ 0.67
PTPRM-201ENST00000332175 BPIFA4PQ86YQ2 179 aa19.24■□□□□ 0.67
PTPRM-201ENST00000332175 DLL3Q9NYJ7 618 aa19.24■□□□□ 0.67
PTPRM-201ENST00000332175 FSTP19883 344 aa19.24■□□□□ 0.67
PTPRM-201ENST00000332175 DUX5Q96PT3 197 aa19.24■□□□□ 0.67
PTPRM-201ENST00000332175 DCTN5Q9BTE1 182 aa19.24■□□□□ 0.67
PTPRM-201ENST00000332175 HSPB7Q9UBY9 170 aa19.24■□□□□ 0.67
PTPRM-201ENST00000332175 PGPA6NDG6 321 aa19.23■□□□□ 0.67
PTPRM-201ENST00000332175 ZNF383Q8NA42 475 aa19.23■□□□□ 0.67
PTPRM-201ENST00000332175 NUP37Q8NFH4 326 aa19.23■□□□□ 0.67
PTPRM-201ENST00000332175 DSPPQ9NZW4 1301 aa19.23■□□□□ 0.67
PTPRM-201ENST00000332175 IGLV1-36A0A0B4J1U3 117 aa19.23■□□□□ 0.67
PTPRM-201ENST00000332175 TIAF1O95411 115 aa19.23■□□□□ 0.67
PTPRM-201ENST00000332175 CXorf66Q5JRM2 361 aaPredicted RBP19.23■□□□□ 0.67
PTPRM-201ENST00000332175 FAM53AQ6NSI3 398 aaPredicted RBP19.23■□□□□ 0.67
PTPRM-201ENST00000332175 DDB2Q92466 427 aa19.23■□□□□ 0.67
PTPRM-201ENST00000332175 TMEM56-RWDD3S4R434 201 aa19.23■□□□□ 0.67
PTPRM-201ENST00000332175 FHL5Q5TD97 284 aa19.23■□□□□ 0.67
PTPRM-201ENST00000332175 A1L4Q6 167 aa19.23■□□□□ 0.67
PTPRM-201ENST00000332175 C17orf51A8MQB3 221 aa19.23■□□□□ 0.67
PTPRM-201ENST00000332175 TMEM222Q9H0R3 208 aa19.23■□□□□ 0.67
PTPRM-201ENST00000332175 A0A087X0M5 115 aa19.22■□□□□ 0.67
PTPRM-201ENST00000332175 A0A1B0GX30 115 aa19.22■□□□□ 0.67
PTPRM-201ENST00000332175 ODAMA1E959 279 aa19.22■□□□□ 0.67
PTPRM-201ENST00000332175 ATP5G2Q06055 141 aa19.22■□□□□ 0.67
PTPRM-201ENST00000332175 CD74P04233 296 aa19.22■□□□□ 0.67
PTPRM-201ENST00000332175 PCOLCEQ15113 449 aa19.22■□□□□ 0.67
PTPRM-201ENST00000332175 SMUG1Q53HV7 270 aa19.22■□□□□ 0.67
PTPRM-201ENST00000332175 ELF5Q9UKW6 265 aaPredicted RBP19.22■□□□□ 0.67
PTPRM-201ENST00000332175 WNT9BO14905 357 aa19.22■□□□□ 0.67
PTPRM-201ENST00000332175 THY1P04216 161 aa19.22■□□□□ 0.67
PTPRM-201ENST00000332175 ACAA1P09110 424 aaPredicted RBP19.22■□□□□ 0.67
PTPRM-201ENST00000332175 BCL2P10415 239 aa19.22■□□□□ 0.67
PTPRM-201ENST00000332175 SGMS2Q8NHU3 365 aa19.22■□□□□ 0.67
PTPRM-201ENST00000332175 PGLYRP4Q96LB8 373 aa19.22■□□□□ 0.67
PTPRM-201ENST00000332175 UNC119Q13432 240 aa19.22■□□□□ 0.67
PTPRM-201ENST00000332175 IGHV3-48P01763 117 aa19.22■□□□□ 0.67
PTPRM-201ENST00000332175 MMD2Q8IY49 270 aa19.21■□□□□ 0.67
PTPRM-201ENST00000332175 MIOXQ9UGB7 285 aa19.21■□□□□ 0.67
PTPRM-201ENST00000332175 UBR3Q6ZT12 1888 aa19.21■□□□□ 0.67
PTPRM-201ENST00000332175 PNKDQ8N490 385 aa19.21■□□□□ 0.67
PTPRM-201ENST00000332175 GPR146Q96CH1 333 aa19.21■□□□□ 0.67
PTPRM-201ENST00000332175 IGHV1-69-2A0A0G2JMI3 117 aa19.21■□□□□ 0.67
PTPRM-201ENST00000332175 RELBQ01201 579 aa19.21■□□□□ 0.67
PTPRM-201ENST00000332175 HERPUD1Q15011 391 aa19.21■□□□□ 0.67
PTPRM-201ENST00000332175 PCSK4Q6UW60 755 aa19.21■□□□□ 0.67
PTPRM-201ENST00000332175 DPH3Q96FX2 82 aa19.21■□□□□ 0.67
PTPRM-201ENST00000332175 RNASE1P07998 156 aaKnown RBP19.21■□□□□ 0.67
PTPRM-201ENST00000332175 VAX1Q5SQQ9 334 aa19.21■□□□□ 0.67
PTPRM-201ENST00000332175 IBA57Q5T440 356 aaKnown RBP19.21■□□□□ 0.67
PTPRM-201ENST00000332175 H1FOOQ8IZA3 346 aaPredicted RBP19.21■□□□□ 0.67
PTPRM-201ENST00000332175 SELENOHQ8IZQ5 122 aaKnown RBP19.21■□□□□ 0.67
PTPRM-201ENST00000332175 FGFRL1Q8N441 504 aa19.21■□□□□ 0.67
PTPRM-201ENST00000332175 IGKV3OR2-268A0A0C4DH90 116 aa19.21■□□□□ 0.67
PTPRM-201ENST00000332175 FAM74A7A6NL05 159 aa19.21■□□□□ 0.67
PTPRM-201ENST00000332175 GLIPR1P48060 266 aa19.21■□□□□ 0.67
PTPRM-201ENST00000332175 KCNE5Q9UJ90 142 aa19.21■□□□□ 0.67
PTPRM-201ENST00000332175 ANKRD31Q8N7Z5 1873 aa19.21■□□□□ 0.67
PTPRM-201ENST00000332175 GREM1O60565 184 aa19.2■□□□□ 0.66
PTPRM-201ENST00000332175 CXCL2P19875 107 aa19.2■□□□□ 0.66
PTPRM-201ENST00000332175 RSPO4Q2I0M5 234 aaPredicted RBP19.2■□□□□ 0.66
PTPRM-201ENST00000332175 CENPVQ7Z7K6 275 aaPredicted RBP19.2■□□□□ 0.66
PTPRM-201ENST00000332175 TRBV5-5A0A0J9YX44 114 aa19.2■□□□□ 0.66
PTPRM-201ENST00000332175 IGKV3-20P01619 116 aa19.2■□□□□ 0.66
PTPRM-201ENST00000332175 IGHV3-23P01764 117 aa19.2■□□□□ 0.66
PTPRM-201ENST00000332175 MFAP4P55083 255 aa19.2■□□□□ 0.66
PTPRM-201ENST00000332175 ZCCHC14Q8WYQ9 949 aaKnown RBP19.2■□□□□ 0.66
PTPRM-201ENST00000332175 RHOVQ96L33 236 aa19.2■□□□□ 0.66
PTPRM-201ENST00000332175 FAM206AQ9NX38 181 aa19.2■□□□□ 0.66
PTPRM-201ENST00000332175 OR52M1Q8NGK5 317 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms