RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 LUMP51884 338 aaPredicted RBP20.81■□□□□ 0.92
SMDT1-201ENST00000331479 LINC00205P59089 165 aa20.81■□□□□ 0.92
SMDT1-201ENST00000331479 TAF15Q92804 592 aaKnown RBP eCLIP20.81■□□□□ 0.92
SMDT1-201ENST00000331479 ATRQ13535 2644 aa20.81■□□□□ 0.92
SMDT1-201ENST00000331479 FAM181BA6NEQ2 426 aa20.8■□□□□ 0.92
SMDT1-201ENST00000331479 GPR137BO60478 399 aa20.8■□□□□ 0.92
SMDT1-201ENST00000331479 PPYP01298 95 aa20.8■□□□□ 0.92
SMDT1-201ENST00000331479 SNRNP70P08621 437 aaKnown RBP20.8■□□□□ 0.92
SMDT1-201ENST00000331479 CT45A6P0DMU7 189 aa20.8■□□□□ 0.92
SMDT1-201ENST00000331479 CT45A5P0DMU8 189 aa20.8■□□□□ 0.92
SMDT1-201ENST00000331479 CT45A7P0DMV0 189 aa20.8■□□□□ 0.92
SMDT1-201ENST00000331479 PTBP1P26599 531 aaKnown RBP eCLIP20.8■□□□□ 0.92
SMDT1-201ENST00000331479 SSBP1Q04837 148 aaKnown RBP20.8■□□□□ 0.92
SMDT1-201ENST00000331479 DHRS11Q6UWP2 260 aa20.8■□□□□ 0.92
SMDT1-201ENST00000331479 PTTG2Q9NZH5 202 aa20.8■□□□□ 0.92
SMDT1-201ENST00000331479 CHST1O43916 411 aa20.8■□□□□ 0.92
SMDT1-201ENST00000331479 KRTAP24-1Q3LI83 254 aa20.8■□□□□ 0.92
SMDT1-201ENST00000331479 TMEM229BQ8NBD8 167 aa20.8■□□□□ 0.92
SMDT1-201ENST00000331479 DRAXINQ8NBI3 349 aaPredicted RBP20.8■□□□□ 0.92
SMDT1-201ENST00000331479 FAM216AQ8WUB2 273 aa20.8■□□□□ 0.92
SMDT1-201ENST00000331479 ZNF2Q9BSG1 426 aaPredicted RBP20.8■□□□□ 0.92
SMDT1-201ENST00000331479 TINAGL1Q9GZM7 467 aaPredicted RBP20.8■□□□□ 0.92
SMDT1-201ENST00000331479 GAB2Q9UQC2 676 aa20.8■□□□□ 0.92
SMDT1-201ENST00000331479 IGKV1D-33P01593 117 aa20.79■□□□□ 0.92
SMDT1-201ENST00000331479 IGKV1-33P01594 117 aa20.79■□□□□ 0.92
SMDT1-201ENST00000331479 IGLV2-14P01704 120 aa20.79■□□□□ 0.92
SMDT1-201ENST00000331479 FXYD4P59646 89 aa20.79■□□□□ 0.92
SMDT1-201ENST00000331479 LSAMPQ13449 338 aa20.79■□□□□ 0.92
SMDT1-201ENST00000331479 VAX1Q5SQQ9 334 aa20.79■□□□□ 0.92
SMDT1-201ENST00000331479 GLDNQ6ZMI3 551 aaPredicted RBP20.79■□□□□ 0.92
SMDT1-201ENST00000331479 Q8N402 240 aa20.79■□□□□ 0.92
SMDT1-201ENST00000331479 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.79■□□□□ 0.92
SMDT1-201ENST00000331479 OR4D10Q8NGI6 311 aa20.79■□□□□ 0.92
SMDT1-201ENST00000331479 THAP7Q9BT49 309 aaPredicted RBP20.79■□□□□ 0.92
SMDT1-201ENST00000331479 SRRQ9GZT4 340 aa20.79■□□□□ 0.92
SMDT1-201ENST00000331479 FAM106CPP0CH98 169 aa20.78■□□□□ 0.92
SMDT1-201ENST00000331479 TAS2R19P59542 299 aa20.78■□□□□ 0.92
SMDT1-201ENST00000331479 ACTBL2Q562R1 376 aa20.78■□□□□ 0.92
SMDT1-201ENST00000331479 THNSL2Q86YJ6 484 aa20.78■□□□□ 0.92
SMDT1-201ENST00000331479 ZFAND2BQ8WV99 257 aa20.78■□□□□ 0.92
SMDT1-201ENST00000331479 ZNF107Q9UII5 783 aaPredicted RBP20.78■□□□□ 0.92
SMDT1-201ENST00000331479 M0R1X1 148 aa20.77■□□□□ 0.92
SMDT1-201ENST00000331479 CD74P04233 296 aa20.77■□□□□ 0.92
SMDT1-201ENST00000331479 CD1BP29016 333 aa20.77■□□□□ 0.92
SMDT1-201ENST00000331479 RNASE10Q5GAN6 216 aaKnown RBP20.77■□□□□ 0.92
SMDT1-201ENST00000331479 ZNF645Q8N7E2 425 aa20.77■□□□□ 0.92
SMDT1-201ENST00000331479 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.77■□□□□ 0.92
SMDT1-201ENST00000331479 OR6F1Q8NGZ6 308 aa20.77■□□□□ 0.92
SMDT1-201ENST00000331479 SECTM1Q8WVN6 248 aa20.77■□□□□ 0.92
SMDT1-201ENST00000331479 PITPNC1Q9UKF7 332 aa20.77■□□□□ 0.92
SMDT1-201ENST00000331479 TSPAN5P62079 268 aa20.76■□□□□ 0.91
SMDT1-201ENST00000331479 HES1Q14469 280 aa20.76■□□□□ 0.91
SMDT1-201ENST00000331479 HNF4GQ14541 408 aa20.76■□□□□ 0.91
SMDT1-201ENST00000331479 STEAP1BQ6NZ63 245 aa20.76■□□□□ 0.91
SMDT1-201ENST00000331479 TRIM63Q969Q1 353 aa20.76■□□□□ 0.91
SMDT1-201ENST00000331479 CSF1P09603 554 aa20.76■□□□□ 0.91
SMDT1-201ENST00000331479 TBPP20226 339 aa20.76■□□□□ 0.91
SMDT1-201ENST00000331479 EBI3Q14213 229 aa20.76■□□□□ 0.91
SMDT1-201ENST00000331479 FAAP20Q6NZ36 180 aa20.76■□□□□ 0.91
SMDT1-201ENST00000331479 TMEM17Q86X19 198 aa20.76■□□□□ 0.91
SMDT1-201ENST00000331479 ZNF383Q8NA42 475 aa20.76■□□□□ 0.91
SMDT1-201ENST00000331479 MOB3AQ96BX8 217 aa20.76■□□□□ 0.91
SMDT1-201ENST00000331479 EAF1Q96JC9 268 aaPredicted RBP20.76■□□□□ 0.91
SMDT1-201ENST00000331479 CCL28Q9NRJ3 127 aa20.76■□□□□ 0.91
SMDT1-201ENST00000331479 ANKRD20A5PA0PJZ0 165 aa20.75■□□□□ 0.91
SMDT1-201ENST00000331479 RAB3DO95716 219 aa20.75■□□□□ 0.91
SMDT1-201ENST00000331479 HERV-K104P61576 105 aa20.75■□□□□ 0.91
SMDT1-201ENST00000331479 LIAT1Q6ZQX7 453 aa20.75■□□□□ 0.91
SMDT1-201ENST00000331479 MFSD4AQ8N468 514 aa20.75■□□□□ 0.91
SMDT1-201ENST00000331479 SDHCQ99643 169 aaPredicted RBP20.75■□□□□ 0.91
SMDT1-201ENST00000331479 SLC5A7Q9GZV3 580 aa20.75■□□□□ 0.91
SMDT1-201ENST00000331479 TAS2R8Q9NYW2 309 aa20.75■□□□□ 0.91
SMDT1-201ENST00000331479 H0YJW9 148 aa20.74■□□□□ 0.91
SMDT1-201ENST00000331479 TMEM11P17152 192 aa20.74■□□□□ 0.91
SMDT1-201ENST00000331479 RELBQ01201 579 aa20.74■□□□□ 0.91
SMDT1-201ENST00000331479 OR5AN1Q8NGI8 311 aa20.74■□□□□ 0.91
SMDT1-201ENST00000331479 RBM14Q96PK6 669 aaKnown RBP20.74■□□□□ 0.91
SMDT1-201ENST00000331479 FXYD6Q9H0Q3 95 aa20.74■□□□□ 0.91
SMDT1-201ENST00000331479 AKIP1Q9NQ31 210 aa20.74■□□□□ 0.91
SMDT1-201ENST00000331479 OR5H14A6NHG9 310 aa20.73■□□□□ 0.91
SMDT1-201ENST00000331479 IFNA6P05013 189 aa20.73■□□□□ 0.91
SMDT1-201ENST00000331479 LINC00299Q6ZSB3 139 aa20.73■□□□□ 0.91
SMDT1-201ENST00000331479 Q8N6K4 173 aa20.73■□□□□ 0.91
SMDT1-201ENST00000331479 RITA1Q96K30 269 aa20.73■□□□□ 0.91
SMDT1-201ENST00000331479 GPHA2Q96T91 129 aa20.73■□□□□ 0.91
SMDT1-201ENST00000331479 SLC25A33Q9BSK2 321 aa20.73■□□□□ 0.91
SMDT1-201ENST00000331479 C1RLQ9NZP8 487 aa20.73■□□□□ 0.91
SMDT1-201ENST00000331479 SLC22A5O76082 557 aa20.72■□□□□ 0.91
SMDT1-201ENST00000331479 OR2F2O95006 317 aa20.72■□□□□ 0.91
SMDT1-201ENST00000331479 MOSP00540 346 aa20.72■□□□□ 0.91
SMDT1-201ENST00000331479 ZNF735P0CB33 412 aa20.72■□□□□ 0.91
SMDT1-201ENST00000331479 DUTP33316 252 aaKnown RBP20.72■□□□□ 0.91
SMDT1-201ENST00000331479 ZNF45Q02386 682 aa20.72■□□□□ 0.91
SMDT1-201ENST00000331479 BAK1Q16611 211 aa20.72■□□□□ 0.91
SMDT1-201ENST00000331479 AADACL3Q5VUY0 350 aa20.72■□□□□ 0.91
SMDT1-201ENST00000331479 DHRS7BQ6IAN0 325 aaPredicted RBP20.72■□□□□ 0.91
SMDT1-201ENST00000331479 OR4C16Q8NGL9 310 aa20.72■□□□□ 0.91
SMDT1-201ENST00000331479 OR2T10Q8NGZ9 312 aa20.72■□□□□ 0.91
SMDT1-201ENST00000331479 LINC00473A8K010 186 aa20.72■□□□□ 0.91
SMDT1-201ENST00000331479 AKAIN1P0CW23 69 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms