RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 OR1L8Q8NGR8 309 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 RSG1Q9BU20 258 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 Q9N2K0 584 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 COMPP49747 757 aaPredicted RBP8.76□□□□□ -1.01
CHD3-201ENST00000330494 MRPL54Q6P161 138 aaKnown RBP8.76□□□□□ -1.01
CHD3-201ENST00000330494 CTHRC1Q96CG8 243 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 FAM206AQ9NX38 181 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 C1RLQ9NZP8 487 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 METTL1Q9UBP6 276 aaKnown RBP8.76□□□□□ -1.01
CHD3-201ENST00000330494 PRNDQ9UKY0 176 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 A6NDN8 102 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 WNT9BO14905 357 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 CD40P25942 277 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 HINT1P49773 126 aaPredicted RBP8.76□□□□□ -1.01
CHD3-201ENST00000330494 ZNF137PP52743 207 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 SRSF10O75494 262 aaKnown RBP8.76□□□□□ -1.01
CHD3-201ENST00000330494 SNCGO76070 127 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 UBE2V2Q15819 145 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 LINC00596Q86U02 117 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 CHAC2Q8WUX2 184 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 ZCCHC14Q8WYQ9 949 aaKnown RBP8.76□□□□□ -1.01
CHD3-201ENST00000330494 WNT5BQ9H1J7 359 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 WDR81Q562E7 1941 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 HLA-DQB1P01920 261 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 THY1P04216 161 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 LOXL3P58215 753 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 ZNF738Q8NE65 137 aa8.76□□□□□ -1.01
CHD3-201ENST00000330494 RECKO95980 971 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 STAG3L2P0CL84 134 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 PLP1P60201 277 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 FAM27E3Q08E93 113 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 HLA-DRB5Q30154 266 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 STPG2Q8N412 459 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 OR2T10Q8NGZ9 312 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 WNT2BQ93097 391 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 MESP1Q9BRJ9 268 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 AICDAQ9GZX7 198 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 DUXBA0A1W2PPF3 345 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 FAM201AQ5SY85 155 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 LDLRAD3Q86YD5 345 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 FAM181AQ8N9Y4 354 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 ZNF426Q9BUY5 554 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 AUP1Q9Y679 476 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 ZSWIM8A7E2V4 1837 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 ZDBF2Q9HCK1 2354 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 PF4V1P10720 104 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 SLC35B1P78383 322 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 RBPMS2Q6ZRY4 209 aaKnown RBP8.75□□□□□ -1.01
CHD3-201ENST00000330494 OR1L6Q8NGR2 347 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 IGKV1D-43A0A0B4J1Z2 117 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 LOC389332A0A1B0GUA5 103 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 MPV17P39210 176 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 UQCRFS1P47985 274 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 GFRA1P56159 465 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 P2RY6Q15077 328 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 ATG101Q9BSB4 218 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 DLL3Q9NYJ7 618 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 IL36RNQ9UBH0 155 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 MGAMO43451 1857 aa8.75□□□□□ -1.01
CHD3-201ENST00000330494 ERVFRD-1P60508 538 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 SURF2Q15527 256 aaPredicted RBP8.74□□□□□ -1.01
CHD3-201ENST00000330494 TEPPQ6URK8 271 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 OR8G5Q8NG78 346 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 DPH3Q96FX2 82 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 GPX7Q96SL4 187 aaPredicted RBP8.74□□□□□ -1.01
CHD3-201ENST00000330494 TMEM140Q9NV12 185 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 A0A1B0GU03 582 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 MDKP21741 143 aaPredicted RBP8.74□□□□□ -1.01
CHD3-201ENST00000330494 COL8A1P27658 744 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 CXorf66Q5JRM2 361 aaPredicted RBP8.74□□□□□ -1.01
CHD3-201ENST00000330494 SLC35E3Q7Z769 313 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 ZNF645Q8N7E2 425 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 APCDD1LQ8NCL9 501 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 VWA8A3KMH1 1905 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 ZNF253O75346 499 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 MBPP02686 304 aaPredicted RBP8.74□□□□□ -1.01
CHD3-201ENST00000330494 IGKV3-11P04433 115 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 KLK2P20151 261 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 ATP6V0CP27449 155 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 GLIPR1P48060 266 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 ZNF658BQ4V348 819 aaPredicted RBP8.74□□□□□ -1.01
CHD3-201ENST00000330494 TMEM191AQ9H0A3 160 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 OR51M1Q9H341 326 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 MANBALQ9NQG1 85 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 DOCK9Q9BZ29 2069 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 TMEM167BQ9NRX6 74 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 MED12Q93074 2177 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 DSPPQ9NZW4 1301 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 IGHV3OR16-12A0A075B7B8 117 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 IGKV3D-15A0A087WSY6 115 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 PIN1P1O15428 100 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 IGKV3-15P01624 115 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 DDTP30046 118 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 LRRC75AQ8NAA5 344 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 OR52M1Q8NGK5 317 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 MAP1LC3CQ9BXW4 147 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 GPR61Q9BZJ8 451 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 RBKSQ9H477 322 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 PITPNC1Q9UKF7 332 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 ADAM11O75078 769 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms