RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 UCP2P55851 309 aa10.9□□□□□ -0.66
HMGCS1-201ENST00000325110 EDDM3BP56851 147 aa10.9□□□□□ -0.66
HMGCS1-201ENST00000325110 VAX2Q9UIW0 290 aa10.9□□□□□ -0.66
HMGCS1-201ENST00000325110 RNF212BA8MTL3 300 aa10.9□□□□□ -0.66
HMGCS1-201ENST00000325110 PPP5D1E7EU14 171 aa10.9□□□□□ -0.66
HMGCS1-201ENST00000325110 SP1P08047 785 aa10.9□□□□□ -0.66
HMGCS1-201ENST00000325110 CTAG1AP78358 180 aa10.9□□□□□ -0.66
HMGCS1-201ENST00000325110 OR13D1Q8NGV5 346 aa10.9□□□□□ -0.66
HMGCS1-201ENST00000325110 DCTN5Q9BTE1 182 aa10.9□□□□□ -0.66
HMGCS1-201ENST00000325110 LINC00470Q9BZP3 86 aa10.9□□□□□ -0.66
HMGCS1-201ENST00000325110 NBASA2RRP1 2371 aa10.9□□□□□ -0.66
HMGCS1-201ENST00000325110 PCNX2A6NKB5 2137 aa10.9□□□□□ -0.67
HMGCS1-201ENST00000325110 PAGE4O60829 102 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 IL18BPO95998 194 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 SOD3P08294 240 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 SSTR5P35346 364 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 ZNF66Q6ZN08 573 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 WFIKKN1Q96NZ8 548 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 A0A1W2PPV4 95 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 SEC14L6B5MCN3 397 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 TMEM241Q24JQ0 296 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 TMEM41BQ5BJD5 291 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 C16orf82Q7Z2V1 217 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 KDF1Q8NAX2 398 aaPredicted RBP10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 WDYHV1Q96HA8 205 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 WDR61Q9GZS3 305 aaKnown RBP10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 OR51I2Q9H344 312 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 OPA3Q9H6K4 179 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 IGKV3D-15A0A087WSY6 115 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 TMEM30CPA0ZSE6 113 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 CXorf65A6NEN9 183 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 ZNF726P1Q15940 193 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 BSXQ3C1V8 233 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 MRGPRGQ86SM5 289 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 DTD1Q8TEA8 209 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 IL22RA2Q969J5 263 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 HEYLQ9NQ87 328 aaPredicted RBP10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 SIRT7Q9NRC8 400 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 ABCA1O95477 2261 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 PLCE1Q9P212 2302 aa10.89□□□□□ -0.67
HMGCS1-201ENST00000325110 PIGBOS1A0A0B4J2F0 54 aa10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 PSPNO60542 156 aa10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 ADAMTS20P59510 1910 aa10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 GAMTQ14353 236 aa10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 PACRGQ96M98 296 aaPredicted RBP10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 CYB5R3P00387 301 aaPredicted RBP10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 HBZP02008 142 aa10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 MEF2BQ02080 365 aaPredicted RBP10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 TNFRSF9Q07011 255 aa10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 TFF3Q07654 80 aa10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 ZNF585BQ52M93 769 aa10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 FAM90A2PQ658T7 463 aa10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 PINX1Q96BK5 328 aaKnown RBP10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 C17orf98A8MV24 154 aa10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 FCGR3BO75015 233 aa10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 GCH1P30793 250 aa10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 GALR1P47211 349 aa10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 KRTAP27-1Q3LI81 207 aa10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 ZNF766Q5HY98 468 aa10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 PRAMEF5Q5TYX0 476 aa10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 MOB1BQ7L9L4 216 aa10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 HAPLN4Q86UW8 402 aa10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 C11orf1Q9H5F2 150 aa10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 SEBOXQ9HB31 216 aaPredicted RBP10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 PATZ1Q9HBE1 687 aaKnown RBP10.88□□□□□ -0.67
HMGCS1-201ENST00000325110 LNP1A1A4G5 178 aa10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 ODAMA1E959 279 aa10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 C12orf77C9JDV5 145 aa10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 COX5BP10606 129 aa10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 RPL30P62888 115 aaKnown RBP10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 WDR86Q86TI4 376 aa10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 RPP25LQ8N5L8 163 aaKnown RBP10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 ELOVL1Q9BW60 279 aa10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 COLQQ9Y215 455 aaPredicted RBP10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 COX5AP20674 150 aa10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 MPV17P39210 176 aa10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 PNRC1Q12796 327 aaPredicted RBP10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 LRRC75BQ2VPJ9 315 aa10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 VKORC1L1Q8N0U8 176 aa10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 EDARADDQ8WWZ3 215 aa10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 FER1L6-AS2Q96M78 137 aa10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 PCGF1Q9BSM1 259 aa10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 CISD1Q9NZ45 108 aaKnown RBP10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 NDUFS6O75380 124 aaKnown RBP10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 PSG7Q13046 419 aa10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 PDLIM3Q53GG5 364 aaPredicted RBP10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 OR8G5Q8NG78 346 aa10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 OR10A7Q8NGE5 316 aa10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 ACTR3CQ9C0K3 210 aaPredicted RBP10.87□□□□□ -0.67
HMGCS1-201ENST00000325110 TECTAO75443 2155 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 BDP1A6H8Y1 2624 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 TRAV38-1A0A0B4J264 116 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 TSTD3H0UI37 97 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 SLC25A6P12236 298 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 SOX8P57073 446 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 FAM3BP58499 235 aaPredicted RBP10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 SERF2P84101 59 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 NRN1LQ496H8 165 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms