RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 CTXN2P0C2S0 81 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 MRGPRGQ86SM5 289 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 HIST3H2BBQ8N257 126 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 EDARADDQ8WWZ3 215 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 RAB40CQ96S21 281 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 IGHV3OR15-7A0A075B7D8 119 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 KLK10O43240 276 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 ZNF253O75346 499 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 CCKARP32238 428 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 P2RY6Q15077 328 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 MRPL54Q6P161 138 aaKnown RBP13.09□□□□□ -0.31
VARS2-201ENST00000321897 RBM14Q96PK6 669 aaKnown RBP13.09□□□□□ -0.31
VARS2-201ENST00000321897 WDR54Q9H977 334 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 ZGRF1Q86YA3 2104 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 FGF5P12034 268 aa13.08□□□□□ -0.31
VARS2-201ENST00000321897 ASPHD2Q6ICH7 369 aa13.08□□□□□ -0.31
VARS2-201ENST00000321897 ACSM6Q6P461 480 aa13.08□□□□□ -0.31
VARS2-201ENST00000321897 OR5AU1Q8NGC0 362 aa13.08□□□□□ -0.31
VARS2-201ENST00000321897 OR4X1Q8NH49 305 aa13.08□□□□□ -0.31
VARS2-201ENST00000321897 TUBA4BQ9H853 241 aa13.08□□□□□ -0.31
VARS2-201ENST00000321897 TICRRQ7Z2Z1 1910 aa13.08□□□□□ -0.32
VARS2-201ENST00000321897 TRIP6Q15654 476 aaKnown RBP13.08□□□□□ -0.32
VARS2-201ENST00000321897 GTF3AQ92664 365 aaKnown RBP13.08□□□□□ -0.32
VARS2-201ENST00000321897 DEPPQ9NTK1 212 aa13.08□□□□□ -0.32
VARS2-201ENST00000321897 KIF26AQ9ULI4 1882 aaPredicted RBP13.08□□□□□ -0.32
VARS2-201ENST00000321897 KIAA1671Q9BY89 1806 aa13.08□□□□□ -0.32
VARS2-201ENST00000321897 A0A0U1RQV5 110 aa13.08□□□□□ -0.32
VARS2-201ENST00000321897 K7ESF4 209 aa13.08□□□□□ -0.32
VARS2-201ENST00000321897 HLA-GP17693 338 aa13.08□□□□□ -0.32
VARS2-201ENST00000321897 G6PCP35575 357 aa13.08□□□□□ -0.32
VARS2-201ENST00000321897 TMEM183AQ8IXX5 376 aa13.08□□□□□ -0.32
VARS2-201ENST00000321897 OIT3Q8WWZ8 545 aa13.08□□□□□ -0.32
VARS2-201ENST00000321897 ABHD14BQ96IU4 210 aa13.08□□□□□ -0.32
VARS2-201ENST00000321897 NDUFAF3Q9BU61 184 aa13.08□□□□□ -0.32
VARS2-201ENST00000321897 LNP1A1A4G5 178 aa13.08□□□□□ -0.32
VARS2-201ENST00000321897 PROB1E7EW31 1015 aa13.08□□□□□ -0.32
VARS2-201ENST00000321897 PITX3O75364 302 aa13.08□□□□□ -0.32
VARS2-201ENST00000321897 RHBDL1O75783 438 aa13.08□□□□□ -0.32
VARS2-201ENST00000321897 FOLR2P14207 255 aa13.08□□□□□ -0.32
VARS2-201ENST00000321897 CDC34P49427 236 aaPredicted RBP13.08□□□□□ -0.32
VARS2-201ENST00000321897 ZNF718Q3SXZ3 478 aa13.08□□□□□ -0.32
VARS2-201ENST00000321897 SF3B5Q9BWJ5 86 aaKnown RBP13.08□□□□□ -0.32
VARS2-201ENST00000321897 TAAR3PQ9P1P4 343 aa13.08□□□□□ -0.32
VARS2-201ENST00000321897 FOXD3Q9UJU5 478 aaPredicted RBP13.08□□□□□ -0.32
VARS2-201ENST00000321897 TIGITQ495A1 244 aa13.07□□□□□ -0.32
VARS2-201ENST00000321897 BOD1Q96IK1 185 aa13.07□□□□□ -0.32
VARS2-201ENST00000321897 Q96M66 194 aa13.07□□□□□ -0.32
VARS2-201ENST00000321897 OPN3Q9H1Y3 402 aaPredicted RBP13.07□□□□□ -0.32
VARS2-201ENST00000321897 OR1A1Q9P1Q5 309 aa13.07□□□□□ -0.32
VARS2-201ENST00000321897 VSTM5A8MXK1 200 aa13.07□□□□□ -0.32
VARS2-201ENST00000321897 SNURFLB1AK76 121 aa13.07□□□□□ -0.32
VARS2-201ENST00000321897 APELAP0DMC3 54 aa13.07□□□□□ -0.32
VARS2-201ENST00000321897 MEF2BQ02080 365 aaPredicted RBP13.07□□□□□ -0.32
VARS2-201ENST00000321897 TMEM187Q14656 261 aa13.07□□□□□ -0.32
VARS2-201ENST00000321897 PINLYPA6NC86 204 aa13.07□□□□□ -0.32
VARS2-201ENST00000321897 RNF212BA8MTL3 300 aa13.07□□□□□ -0.32
VARS2-201ENST00000321897 TCTAP57738 103 aa13.07□□□□□ -0.32
VARS2-201ENST00000321897 EIF3IQ13347 325 aaKnown RBP13.07□□□□□ -0.32
VARS2-201ENST00000321897 ZNF441Q8N8Z8 693 aa13.07□□□□□ -0.32
VARS2-201ENST00000321897 LRRC29Q8WV35 223 aa13.07□□□□□ -0.32
VARS2-201ENST00000321897 SSMEM1Q8WWF3 244 aa13.07□□□□□ -0.32
VARS2-201ENST00000321897 RAB24Q969Q5 203 aa13.07□□□□□ -0.32
VARS2-201ENST00000321897 EREGO14944 169 aa13.06□□□□□ -0.32
VARS2-201ENST00000321897 TOX4O94842 621 aa13.06□□□□□ -0.32
VARS2-201ENST00000321897 NDUFB4O95168 129 aa13.06□□□□□ -0.32
VARS2-201ENST00000321897 CAMPP49913 170 aa13.06□□□□□ -0.32
VARS2-201ENST00000321897 RNASEKQ6P5S7 137 aaKnown RBP13.06□□□□□ -0.32
VARS2-201ENST00000321897 PROCRQ9UNN8 238 aa13.06□□□□□ -0.32
VARS2-201ENST00000321897 ACACBO00763 2458 aa13.06□□□□□ -0.32
VARS2-201ENST00000321897 IGF2RP11717 2491 aa13.06□□□□□ -0.32
VARS2-201ENST00000321897 MELTFP08582 738 aa13.06□□□□□ -0.32
VARS2-201ENST00000321897 RANP62826 216 aaKnown RBP13.06□□□□□ -0.32
VARS2-201ENST00000321897 H1FOOQ8IZA3 346 aaPredicted RBP13.06□□□□□ -0.32
VARS2-201ENST00000321897 CPEB3Q8NE35 698 aaKnown RBP13.06□□□□□ -0.32
VARS2-201ENST00000321897 CLN8Q9UBY8 286 aa13.06□□□□□ -0.32
VARS2-201ENST00000321897 KLF7O75840 302 aaPredicted RBP13.06□□□□□ -0.32
VARS2-201ENST00000321897 GCGP01275 180 aa13.06□□□□□ -0.32
VARS2-201ENST00000321897 CD82P27701 267 aa13.06□□□□□ -0.32
VARS2-201ENST00000321897 ZADH2Q8N4Q0 377 aa13.06□□□□□ -0.32
VARS2-201ENST00000321897 LEAP2Q969E1 77 aa13.06□□□□□ -0.32
VARS2-201ENST00000321897 IMMP2LQ96T52 175 aa13.06□□□□□ -0.32
VARS2-201ENST00000321897 LIN7CQ9NUP9 197 aaKnown RBP13.06□□□□□ -0.32
VARS2-201ENST00000321897 TANC1Q9C0D5 1861 aa13.06□□□□□ -0.32
VARS2-201ENST00000321897 DIRC3C9JPN6 131 aa13.05□□□□□ -0.32
VARS2-201ENST00000321897 PMELP40967 661 aa13.05□□□□□ -0.32
VARS2-201ENST00000321897 COL5A1-AS1Q5SY13 56 aa13.05□□□□□ -0.32
VARS2-201ENST00000321897 GINS3Q9BRX5 216 aa13.05□□□□□ -0.32
VARS2-201ENST00000321897 KLF2Q9Y5W3 355 aaPredicted RBP13.05□□□□□ -0.32
VARS2-201ENST00000321897 NCOR2Q9Y618 2525 aa13.05□□□□□ -0.32
VARS2-201ENST00000321897 CD81P60033 236 aa13.05□□□□□ -0.32
VARS2-201ENST00000321897 MRPL14Q6P1L8 145 aaKnown RBP13.05□□□□□ -0.32
VARS2-201ENST00000321897 LYG1Q8N1E2 194 aa13.05□□□□□ -0.32
VARS2-201ENST00000321897 SARAFQ96BY9 339 aa13.05□□□□□ -0.32
VARS2-201ENST00000321897 OR4C12Q96R67 309 aa13.05□□□□□ -0.32
VARS2-201ENST00000321897 HIPK2Q9H2X6 1198 aa13.05□□□□□ -0.32
VARS2-201ENST00000321897 WNT9BO14905 357 aa13.05□□□□□ -0.32
VARS2-201ENST00000321897 HRASP01112 189 aa13.05□□□□□ -0.32
VARS2-201ENST00000321897 IFI6P09912 130 aa13.05□□□□□ -0.32
VARS2-201ENST00000321897 TNFRSF9Q07011 255 aa13.05□□□□□ -0.32
VARS2-201ENST00000321897 KLHDC1Q8N7A1 406 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms