RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 PRSS2P07478 247 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 PQLC2Q6ZP29 291 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 SGK494Q96LW2 274 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 ZNF407Q9C0G0 2248 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 AMER3Q8N944 861 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 AQP10Q96PS8 301 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 SBF2Q86WG5 1849 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 ABCA7Q8IZY2 2146 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 FOXJ2Q9P0K8 574 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 METTL12A8MUP2 240 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 WNT9BO14905 357 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 TNFSF10P50591 281 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 KRTCAP3Q53RY4 240 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 FCGR3AP08637 254 aa14.68□□□□□ -0.06
SMCHD1-201ENST00000320876 WDR25Q64LD2 544 aaPredicted RBP14.68□□□□□ -0.06
SMCHD1-201ENST00000320876 MMDQ15546 238 aa14.68□□□□□ -0.06
SMCHD1-201ENST00000320876 GPBAR1Q8TDU6 330 aa14.68□□□□□ -0.06
SMCHD1-201ENST00000320876 OR5AC2Q9NZP5 309 aa14.68□□□□□ -0.06
SMCHD1-201ENST00000320876 A0A1W2PS18 150 aa14.68□□□□□ -0.06
SMCHD1-201ENST00000320876 PATE4P0C8F1 98 aa14.68□□□□□ -0.06
SMCHD1-201ENST00000320876 SRIP30626 198 aa14.68□□□□□ -0.06
SMCHD1-201ENST00000320876 TEX30Q5JUR7 227 aa14.68□□□□□ -0.06
SMCHD1-201ENST00000320876 RND1Q92730 232 aa14.68□□□□□ -0.06
SMCHD1-201ENST00000320876 CT62P0C5K7 136 aa14.68□□□□□ -0.06
SMCHD1-201ENST00000320876 ZNF660Q6AZW8 331 aaPredicted RBP14.68□□□□□ -0.06
SMCHD1-201ENST00000320876 ZNF714Q96N38 554 aa14.68□□□□□ -0.06
SMCHD1-201ENST00000320876 PPP1R17O96001 155 aa14.68□□□□□ -0.06
SMCHD1-201ENST00000320876 TDHQ8IZJ6 230 aa14.68□□□□□ -0.06
SMCHD1-201ENST00000320876 BEND2Q8NDZ0 799 aa14.68□□□□□ -0.06
SMCHD1-201ENST00000320876 PARLQ9H300 379 aa14.68□□□□□ -0.06
SMCHD1-201ENST00000320876 C10orf128Q5T292 105 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 PUSL1Q8N0Z8 303 aaKnown RBP14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 TMEM56-RWDD3S4R434 201 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 ZNF441Q8N8Z8 693 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 GPR35Q9HC97 309 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 ST6GALNAC2Q9UJ37 374 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 LOC285556D6RIA3 1793 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 FSTP19883 344 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 DCAF12L2Q5VW00 463 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 OR8G5Q8NG78 346 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 NEU1Q99519 415 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 PQLC2LA1A4F0 135 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 UBTD1Q9HAC8 227 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 PAPPAQ13219 1627 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 LCTP09848 1927 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 C7orf71A4D174 169 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 VSIG10L2P0DP72 767 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 OR4C13Q8NGP0 309 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 KIR2DL4Q99706 377 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 C19orf24Q9BVV8 132 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 FLRT3Q9NZU0 649 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 GUSBP11Q6P575 273 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 OR4D5Q8NGN0 318 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 CRISPLD2Q9H0B8 497 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 ZNF831Q5JPB2 1677 aa14.67□□□□□ -0.06
SMCHD1-201ENST00000320876 SBF1O95248 1867 aa14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 C1QTNF9BB2RNN3 333 aa14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 MPTX1A8MV57 137 aa14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 RPL31P62899 125 aaKnown RBP14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 RUNX1Q01196 453 aa14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 MRPS18BQ9Y676 258 aaKnown RBP14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 NUBP1P53384 320 aa14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 PAPPA-AS1Q5QFB9 102 aa14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 RBKSQ9H477 322 aa14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 SMOC1Q9H4F8 434 aa14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 EFNB2P52799 333 aa14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 GTF3C1Q12789 2109 aa14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 LIPFP07098 398 aa14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 LINC00869P0C866 280 aa14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 GEMIN7Q9H840 131 aaKnown RBP14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 A1L4Q6 167 aa14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 DLL1O00548 723 aa14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 GAB4Q2WGN9 574 aa14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 TMEM91Q6ZNR0 172 aa14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 ZNF418Q8TF45 676 aaPredicted RBP14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 TREM2Q9NZC2 230 aa14.66□□□□□ -0.06
SMCHD1-201ENST00000320876 COL10A1Q03692 680 aa14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 COX14Q96I36 57 aa14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 JKAMPQ9P055 326 aa14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 FAM90A26D6RGX4 464 aa14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 HOXB3P14651 431 aaPredicted RBP14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 RPS11P62280 158 aaKnown RBP eCLIP14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 C8orf82Q6P1X6 216 aaPredicted RBP14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 RASL10BQ96S79 203 aa14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 TMEM240Q5SV17 173 aa14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 IGHV1OR21-1A0A087WYE8 117 aa14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 MRPS18AQ9NVS2 196 aaKnown RBP14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 EML2O95834 649 aa14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 DANCRP0C864 163 aa14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 INO80CQ6PI98 192 aaPredicted RBP14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 PRELID3AQ96N28 172 aa14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 MARVELD3Q96A59 401 aa14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 TINAGQ9UJW2 476 aa14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 RPL8P62917 257 aaKnown RBP14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 RHBDD2Q6NTF9 364 aa14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 ZNF414Q96IQ9 312 aa14.65□□□□□ -0.06
SMCHD1-201ENST00000320876 MDKP21741 143 aaPredicted RBP14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 OTX1P32242 354 aaPredicted RBP14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 HIST1H1AQ02539 215 aaPredicted RBP14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 ZIC1Q15915 447 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms