RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 CTDSP1Q9GZU7 261 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 VSIRQ9H7M9 311 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 ZNF391Q9UJN7 358 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 PROCRQ9UNN8 238 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 KIAA2026Q5HYC2 2103 aa13.42□□□□□ -0.26
USH1C-202ENST00000318024 IGKV1-6A0A0C4DH72 117 aa13.42□□□□□ -0.26
USH1C-202ENST00000318024 AGFG2O95081 481 aa13.42□□□□□ -0.26
USH1C-202ENST00000318024 UBE2NP61088 152 aaKnown RBP13.42□□□□□ -0.26
USH1C-202ENST00000318024 PMS2P11Q13670 270 aa13.42□□□□□ -0.26
USH1C-202ENST00000318024 WDR25Q64LD2 544 aaPredicted RBP13.42□□□□□ -0.26
USH1C-202ENST00000318024 CENPVQ7Z7K6 275 aaPredicted RBP13.42□□□□□ -0.26
USH1C-202ENST00000318024 CXorf67Q86X51 503 aaPredicted RBP13.42□□□□□ -0.26
USH1C-202ENST00000318024 ACTR3CQ9C0K3 210 aaPredicted RBP13.42□□□□□ -0.26
USH1C-202ENST00000318024 SRD5A3Q9H8P0 318 aa13.42□□□□□ -0.26
USH1C-202ENST00000318024 OR14J1Q9UGF5 321 aa13.42□□□□□ -0.26
USH1C-202ENST00000318024 SPTA1P02549 2419 aa13.42□□□□□ -0.26
USH1C-202ENST00000318024 SMCO3A2RU48 225 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 FAM90A10PA6NDY2 464 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 FAM90A18PA6NE21 464 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 FAM90A16PA6NEW6 464 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 FAM90A20PA6NIJ5 464 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 FAM90A8PA6NJQ4 464 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 FAM90A7PA6NKC0 464 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 FAM90A22PA8MWA6 464 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 FAM90A12PA8MX19 464 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 FAM90A5PA8MXJ8 464 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 FAM90A23PA8MXZ1 464 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 H0Y980 276 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 OR7C1O76099 320 aaPredicted RBP13.41□□□□□ -0.26
USH1C-202ENST00000318024 CGAP01215 116 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 FAM90A15PP0C7V4 464 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 FAM90A13PP0C7W8 464 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 FAM90A14PP0C7W9 464 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 FAM90A24PP0C7X0 464 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 APLNRP35414 380 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 GFRALQ6UXV0 394 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 DOLPP1Q86YN1 238 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 CCL28Q9NRJ3 127 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 ATRXP46100 2492 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 NXPH3O95157 252 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 SLC25A6P12236 298 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 IDH3GP51553 393 aaPredicted RBP13.41□□□□□ -0.26
USH1C-202ENST00000318024 SPIN3Q5JUX0 258 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 ZNF787Q6DD87 383 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 ZNF880Q6PDB4 577 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 COLCA1Q6ZS62 124 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 ZNF664Q8N3J9 261 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 NANOS1Q8WY41 292 aaKnown RBP13.41□□□□□ -0.26
USH1C-202ENST00000318024 RSG1Q9BU20 258 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 PRR14LQ5THK1 2151 aa13.41□□□□□ -0.26
USH1C-202ENST00000318024 SLC33A1O00400 549 aaPredicted RBP13.4□□□□□ -0.26
USH1C-202ENST00000318024 TK1P04183 234 aa13.4□□□□□ -0.26
USH1C-202ENST00000318024 MDKP21741 143 aaPredicted RBP13.4□□□□□ -0.26
USH1C-202ENST00000318024 WNT5AP41221 380 aa13.4□□□□□ -0.26
USH1C-202ENST00000318024 ZNF611Q8N823 705 aa13.4□□□□□ -0.26
USH1C-202ENST00000318024 OR10A7Q8NGE5 316 aa13.4□□□□□ -0.26
USH1C-202ENST00000318024 SPSB4Q96A44 273 aa13.4□□□□□ -0.26
USH1C-202ENST00000318024 GPR146Q96CH1 333 aa13.4□□□□□ -0.26
USH1C-202ENST00000318024 PSMG3Q9BT73 122 aaPredicted RBP13.4□□□□□ -0.26
USH1C-202ENST00000318024 CABLES2Q9BTV7 478 aa13.4□□□□□ -0.26
USH1C-202ENST00000318024 ZGRF1Q86YA3 2104 aa13.4□□□□□ -0.26
USH1C-202ENST00000318024 CHD3Q12873 2000 aaKnown RBP13.4□□□□□ -0.26
USH1C-202ENST00000318024 ZFP92A6NM28 416 aa13.4□□□□□ -0.26
USH1C-202ENST00000318024 PGLYRP1O75594 196 aaPredicted RBP13.4□□□□□ -0.26
USH1C-202ENST00000318024 CD55P08174 381 aa13.4□□□□□ -0.26
USH1C-202ENST00000318024 COX5BP10606 129 aa13.4□□□□□ -0.26
USH1C-202ENST00000318024 ARL16Q0P5N6 197 aa13.4□□□□□ -0.26
USH1C-202ENST00000318024 SPATA46Q5T0L3 261 aa13.4□□□□□ -0.26
USH1C-202ENST00000318024 PCSK4Q6UW60 755 aa13.4□□□□□ -0.26
USH1C-202ENST00000318024 HAPLN4Q86UW8 402 aa13.4□□□□□ -0.26
USH1C-202ENST00000318024 ZCCHC14Q8WYQ9 949 aaKnown RBP13.4□□□□□ -0.26
USH1C-202ENST00000318024 TECTBQ96PL2 329 aa13.4□□□□□ -0.26
USH1C-202ENST00000318024 HS3ST6Q96QI5 342 aa13.4□□□□□ -0.26
USH1C-202ENST00000318024 AGMATQ9BSE5 352 aa13.4□□□□□ -0.26
USH1C-202ENST00000318024 FGF23Q9GZV9 251 aaPredicted RBP13.4□□□□□ -0.26
USH1C-202ENST00000318024 ZNF816-ZNF321PA0A0X1KG74 233 aa13.39□□□□□ -0.27
USH1C-202ENST00000318024 PRRG2O14669 202 aa13.39□□□□□ -0.27
USH1C-202ENST00000318024 WNT2P09544 360 aa13.39□□□□□ -0.27
USH1C-202ENST00000318024 FGF7P21781 194 aa13.39□□□□□ -0.27
USH1C-202ENST00000318024 COL10A1Q03692 680 aa13.39□□□□□ -0.27
USH1C-202ENST00000318024 PLCXD3Q63HM9 321 aa13.39□□□□□ -0.27
USH1C-202ENST00000318024 ZNF525Q8N782 197 aa13.39□□□□□ -0.27
USH1C-202ENST00000318024 BEND2Q8NDZ0 799 aa13.39□□□□□ -0.27
USH1C-202ENST00000318024 PIGCQ92535 297 aa13.39□□□□□ -0.27
USH1C-202ENST00000318024 RAB24Q969Q5 203 aa13.39□□□□□ -0.27
USH1C-202ENST00000318024 NEU1Q99519 415 aa13.39□□□□□ -0.27
USH1C-202ENST00000318024 ADGRG4Q8IZF6 3080 aa13.39□□□□□ -0.27
USH1C-202ENST00000318024 CNOT4O95628 575 aaKnown RBP13.39□□□□□ -0.27
USH1C-202ENST00000318024 COX5AP20674 150 aa13.39□□□□□ -0.27
USH1C-202ENST00000318024 BMP5P22003 454 aa13.39□□□□□ -0.27
USH1C-202ENST00000318024 PDLIM4P50479 330 aa13.39□□□□□ -0.27
USH1C-202ENST00000318024 ZNF474Q6S9Z5 364 aaPredicted RBP13.39□□□□□ -0.27
USH1C-202ENST00000318024 Q6ZRM9 215 aa13.39□□□□□ -0.27
USH1C-202ENST00000318024 SLC25A26Q70HW3 274 aa13.39□□□□□ -0.27
USH1C-202ENST00000318024 OR1P1Q8NH06 330 aa13.39□□□□□ -0.27
USH1C-202ENST00000318024 RNASE11Q8TAA1 199 aaKnown RBP13.39□□□□□ -0.27
USH1C-202ENST00000318024 APOBEC3DQ96AK3 386 aaPredicted RBP13.39□□□□□ -0.27
USH1C-202ENST00000318024 NOL4LQ96MY1 436 aaPredicted RBP13.39□□□□□ -0.27
USH1C-202ENST00000318024 RAB40CQ96S21 281 aa13.39□□□□□ -0.27
USH1C-202ENST00000318024 CRIM1Q9NZV1 1036 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms