RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 HEATR1Q9H583 2144 aaKnown RBP8.93□□□□□ -0.98
COL3A1-202ENST00000317840 FRYLO94915 3013 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 ELOA3CA0A087WX78 387 aaPredicted RBP8.93□□□□□ -0.98
COL3A1-202ENST00000317840 XKRY2A2RUG3 117 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 DEFB108AA8MXU0 73 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 C21orf140B9A014 251 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 SOX15O60248 233 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 FABP6P51161 128 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 SERF2P84101 59 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 MEF2BQ02080 365 aaPredicted RBP8.93□□□□□ -0.98
COL3A1-202ENST00000317840 EDDM3AQ14507 147 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 TBC1D28Q2M2D7 210 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 ALKBH6Q3KRA9 238 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 TMEM41BQ5BJD5 291 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 H2BFWTQ7Z2G1 175 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 TAF15Q92804 592 aaKnown RBP eCLIP8.93□□□□□ -0.98
COL3A1-202ENST00000317840 OR51I2Q9H344 312 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 CISD1Q9NZ45 108 aaKnown RBP8.93□□□□□ -0.98
COL3A1-202ENST00000317840 IGHV3-43A0A0B4J1X8 118 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 GATCO43716 136 aaKnown RBP8.92□□□□□ -0.98
COL3A1-202ENST00000317840 OR2H2O95918 312 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 IGHV3-43DP0DP04 118 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 ARL16Q0P5N6 197 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 C16orf82Q7Z2V1 217 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 ZADH2Q8N4Q0 377 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 ZNF525Q8N782 197 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 SPSB4Q96A44 273 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 GALMQ96C23 342 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 NAT8Q9UHE5 227 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 COL4A2P08572 1712 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 J3QT63 122 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 COX5AP20674 150 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 RTP5Q14D33 572 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 SAXO1Q8IYX7 474 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 TPRX1Q8N7U7 411 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 OR5P3Q8WZ94 311 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 HINT2Q9BX68 163 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 GTF3C1Q12789 2109 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 CD55P08174 381 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 HNF1AP20823 631 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 ZNF324BQ6AW86 544 aaPredicted RBP8.92□□□□□ -0.98
COL3A1-202ENST00000317840 PCSK4Q6UW60 755 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 NUFIP2Q7Z417 695 aaKnown RBP8.92□□□□□ -0.98
COL3A1-202ENST00000317840 ACTR3CQ9C0K3 210 aaPredicted RBP8.92□□□□□ -0.98
COL3A1-202ENST00000317840 OR2J1Q9GZK6 312 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 RNF115Q9Y4L5 304 aa8.92□□□□□ -0.98
COL3A1-202ENST00000317840 PPIHO43447 177 aaKnown RBP8.91□□□□□ -0.98
COL3A1-202ENST00000317840 TGOLN2O43493 480 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 PAGE4O60829 102 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 DEFA4P12838 97 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 MDP1Q86V88 176 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 DRAM1Q8N682 238 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 MRGPRDQ8TDS7 321 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 WDR61Q9GZS3 305 aaKnown RBP8.91□□□□□ -0.98
COL3A1-202ENST00000317840 SDF2L1Q9HCN8 221 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 PITPNC1Q9UKF7 332 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 IGHV3-13P01766 116 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 IGHV3-7P01780 117 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 FAM90A2PQ658T7 463 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 HIST3H2BBQ8N257 126 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 FDCSPQ8NFU4 85 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 LOXL4Q96JB6 756 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 PCGF1Q9BSM1 259 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 DDA1Q9BW61 102 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 FGF23Q9GZV9 251 aaPredicted RBP8.91□□□□□ -0.98
COL3A1-202ENST00000317840 FUT9Q9Y231 359 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 NCOR2Q9Y618 2525 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 ZNF503-AS2A6NEH8 195 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 ABHD5Q8WTS1 349 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 GNG12Q9UBI6 72 aa8.91□□□□□ -0.98
COL3A1-202ENST00000317840 SCGB1D1O95968 90 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 CRYAAP02489 173 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 HIST1H1BP16401 226 aaKnown RBP8.9□□□□□ -0.98
COL3A1-202ENST00000317840 EGR1P18146 543 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 EDDM3BP56851 147 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 AESQ08117 197 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 PDLIM3Q53GG5 364 aaPredicted RBP8.9□□□□□ -0.98
COL3A1-202ENST00000317840 KCNIP4Q6PIL6 250 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 MOB1BQ7L9L4 216 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 PLPPR1Q8TBJ4 325 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 POM121L2Q96KW2 1035 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 SH2D2AQ9NP31 389 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.9□□□□□ -0.98
COL3A1-202ENST00000317840 ZGRF1Q86YA3 2104 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 MED12LQ86YW9 2145 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 ZNF318Q5VUA4 2279 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 AGFG2O95081 481 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 IGKV1-5P01602 117 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 CEACAM1P13688 526 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 LRRC75BQ2VPJ9 315 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 ZNF826PQ6ZT77 177 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 OR52L2PQ8NGH6 319 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 OR1L1Q8NH94 360 aa8.9□□□□□ -0.98
COL3A1-202ENST00000317840 CACNA1BQ00975 2339 aa8.9□□□□□ -0.99
COL3A1-202ENST00000317840 GFRA1P56159 465 aa8.9□□□□□ -0.99
COL3A1-202ENST00000317840 PMS2P11Q13670 270 aa8.9□□□□□ -0.99
COL3A1-202ENST00000317840 ZNF600Q6ZNG1 722 aa8.9□□□□□ -0.99
COL3A1-202ENST00000317840 SCCPDHQ8NBX0 429 aa8.9□□□□□ -0.99
COL3A1-202ENST00000317840 DTD1Q8TEA8 209 aa8.9□□□□□ -0.99
COL3A1-202ENST00000317840 LSM10Q969L4 123 aaKnown RBP8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms