RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 EMG1Q92979 244 aaKnown RBP11.05□□□□□ -0.64
CPNE1-201ENST00000317677 HIST1H2AAQ96QV6 131 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 MIEN1Q9BRT3 115 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 FAAP24Q9BTP7 215 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 TCF21O43680 179 aa11.04□□□□□ -0.64
CPNE1-201ENST00000317677 SYNGR1O43759 233 aa11.04□□□□□ -0.64
CPNE1-201ENST00000317677 CA11O75493 328 aa11.04□□□□□ -0.64
CPNE1-201ENST00000317677 IRF2P14316 349 aa11.04□□□□□ -0.64
CPNE1-201ENST00000317677 TMEM11P17152 192 aa11.04□□□□□ -0.64
CPNE1-201ENST00000317677 RBM11P57052 281 aaKnown RBP11.04□□□□□ -0.64
CPNE1-201ENST00000317677 SELENOTP62341 195 aa11.04□□□□□ -0.64
CPNE1-201ENST00000317677 ICAM4Q14773 271 aa11.04□□□□□ -0.64
CPNE1-201ENST00000317677 KRTCAP3Q53RY4 240 aa11.04□□□□□ -0.64
CPNE1-201ENST00000317677 PRR30Q53SZ7 412 aaPredicted RBP11.04□□□□□ -0.64
CPNE1-201ENST00000317677 COL5A1-AS1Q5SY13 56 aa11.04□□□□□ -0.64
CPNE1-201ENST00000317677 BRICD5Q6PL45 260 aa11.04□□□□□ -0.64
CPNE1-201ENST00000317677 FAM180AQ6UWF9 173 aa11.04□□□□□ -0.64
CPNE1-201ENST00000317677 Q6ZPA2 131 aa11.04□□□□□ -0.64
CPNE1-201ENST00000317677 CISD2Q8N5K1 135 aaKnown RBP11.04□□□□□ -0.64
CPNE1-201ENST00000317677 SLC25A40Q8TBP6 338 aa11.04□□□□□ -0.64
CPNE1-201ENST00000317677 RNASE8Q8TDE3 154 aaKnown RBP11.04□□□□□ -0.64
CPNE1-201ENST00000317677 SMIM3Q9BZL3 60 aa11.04□□□□□ -0.64
CPNE1-201ENST00000317677 MTCH1Q9NZJ7 389 aa11.04□□□□□ -0.64
CPNE1-201ENST00000317677 IL36RNQ9UBH0 155 aa11.04□□□□□ -0.64
CPNE1-201ENST00000317677 AK3Q9UIJ7 227 aa11.04□□□□□ -0.64
CPNE1-201ENST00000317677 POLR3KQ9Y2Y1 108 aaPredicted RBP11.04□□□□□ -0.64
CPNE1-201ENST00000317677 WSB1Q9Y6I7 421 aa11.04□□□□□ -0.64
CPNE1-201ENST00000317677 XKRY2A2RUG3 117 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 SERPINE3A8MV23 424 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 J3QW42 95 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 IGLV1-44P01699 117 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 CECR9P0C854 216 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 CA6P23280 308 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 CEACAM8P31997 349 aaPredicted RBP11.03□□□□□ -0.64
CPNE1-201ENST00000317677 KLF3P57682 345 aaPredicted RBP11.03□□□□□ -0.64
CPNE1-201ENST00000317677 CCL20P78556 96 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 COL10A1Q03692 680 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 LEMD1Q68G75 181 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 BHLHA15Q7RTS1 189 aaPredicted RBP11.03□□□□□ -0.64
CPNE1-201ENST00000317677 WDR86Q86TI4 376 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 FAM185AQ8N0U4 392 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 OR5A2Q8NGI9 324 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 OR5L1Q8NGL2 311 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 FAM213BQ8TBF2 198 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 MRGPRDQ8TDS7 321 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 FKBP11Q9NYL4 201 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 HSF4Q9ULV5 492 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 ST3GAL6Q9Y274 331 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 NKX6-3A6NJ46 265 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 HPRT1P00492 218 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 GLI4P10075 376 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 FUT3P21217 361 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 TIMP3P35625 211 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 MPV17P39210 176 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 RPL29P47914 159 aaKnown RBP11.03□□□□□ -0.64
CPNE1-201ENST00000317677 SNU13P55769 128 aaKnown RBP11.03□□□□□ -0.64
CPNE1-201ENST00000317677 CYB561D1Q8N8Q1 229 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 RBMXL1Q96E39 390 aaKnown RBP11.03□□□□□ -0.64
CPNE1-201ENST00000317677 ST6GALNAC5Q9BVH7 336 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 PLEKHJ1Q9NW61 149 aa11.03□□□□□ -0.64
CPNE1-201ENST00000317677 YLPM1P49750 1951 aaKnown RBP11.02□□□□□ -0.64
CPNE1-201ENST00000317677 IGHV1-18A0A0C4DH31 117 aa11.02□□□□□ -0.65
CPNE1-201ENST00000317677 ANKRD30BLA7E2S9 258 aa11.02□□□□□ -0.65
CPNE1-201ENST00000317677 CIDEAO60543 219 aa11.02□□□□□ -0.65
CPNE1-201ENST00000317677 NXPH2O95156 264 aa11.02□□□□□ -0.65
CPNE1-201ENST00000317677 IFNA21P01568 189 aa11.02□□□□□ -0.65
CPNE1-201ENST00000317677 PTGER4P35408 488 aa11.02□□□□□ -0.65
CPNE1-201ENST00000317677 RANP62826 216 aaKnown RBP11.02□□□□□ -0.65
CPNE1-201ENST00000317677 PSG7Q13046 419 aa11.02□□□□□ -0.65
CPNE1-201ENST00000317677 P2RY6Q15077 328 aa11.02□□□□□ -0.65
CPNE1-201ENST00000317677 C17orf78Q8N4C9 275 aa11.02□□□□□ -0.65
CPNE1-201ENST00000317677 ZNF488Q96MN9 340 aa11.02□□□□□ -0.65
CPNE1-201ENST00000317677 CABLES2Q9BTV7 478 aa11.02□□□□□ -0.65
CPNE1-201ENST00000317677 DNAJC4Q9NNZ3 241 aa11.02□□□□□ -0.65
CPNE1-201ENST00000317677 AURKAIP1Q9NWT8 199 aaPredicted RBP11.02□□□□□ -0.65
CPNE1-201ENST00000317677 MPC1Q9Y5U8 109 aa11.02□□□□□ -0.65
CPNE1-201ENST00000317677 SLC25A15Q9Y619 301 aa11.02□□□□□ -0.65
CPNE1-201ENST00000317677 MYO18BQ8IUG5 2567 aa11.02□□□□□ -0.65
CPNE1-201ENST00000317677 ZGRF1Q86YA3 2104 aa11.02□□□□□ -0.65
CPNE1-201ENST00000317677 SDCBPO00560 298 aaPredicted RBP11.01□□□□□ -0.65
CPNE1-201ENST00000317677 DIRAS3O95661 229 aa11.01□□□□□ -0.65
CPNE1-201ENST00000317677 RAC2P15153 192 aa11.01□□□□□ -0.65
CPNE1-201ENST00000317677 AMY2BP19961 511 aa11.01□□□□□ -0.65
CPNE1-201ENST00000317677 HNF1AP20823 631 aa11.01□□□□□ -0.65
CPNE1-201ENST00000317677 OR5I1Q13606 314 aa11.01□□□□□ -0.65
CPNE1-201ENST00000317677 ZNF705AQ6ZN79 300 aaPredicted RBP11.01□□□□□ -0.65
CPNE1-201ENST00000317677 SSX7Q7RTT5 188 aa11.01□□□□□ -0.65
CPNE1-201ENST00000317677 DOLPP1Q86YN1 238 aa11.01□□□□□ -0.65
CPNE1-201ENST00000317677 SAXO1Q8IYX7 474 aa11.01□□□□□ -0.65
CPNE1-201ENST00000317677 OR13G1Q8NGZ3 307 aa11.01□□□□□ -0.65
CPNE1-201ENST00000317677 ORAOV1Q8WV07 137 aa11.01□□□□□ -0.65
CPNE1-201ENST00000317677 TMEM170AQ8WVE7 144 aa11.01□□□□□ -0.65
CPNE1-201ENST00000317677 ZNF2Q9BSG1 426 aaPredicted RBP11.01□□□□□ -0.65
CPNE1-201ENST00000317677 PRR13Q9NZ81 148 aa11.01□□□□□ -0.65
CPNE1-201ENST00000317677 PPBPP02775 128 aa11.01□□□□□ -0.65
CPNE1-201ENST00000317677 SELEP16581 610 aa11.01□□□□□ -0.65
CPNE1-201ENST00000317677 ECI1P42126 302 aa11.01□□□□□ -0.65
CPNE1-201ENST00000317677 MRPL41Q8IXM3 137 aaKnown RBP11.01□□□□□ -0.65
CPNE1-201ENST00000317677 IMMP2LQ96T52 175 aa11.01□□□□□ -0.65
CPNE1-201ENST00000317677 SH3BGRL3Q9H299 93 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms