RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 TMEM189-UBE2V1I3L0A0 370 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 APOMO95445 188 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 MAS1LP35410 378 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 MESTQ5EB52 335 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 FER1L6-AS2Q96M78 137 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 LY75O60449 1722 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 TRAV8-2A0A0B4J237 113 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 PRR35P0CG20 571 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 HKR1P10072 659 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 SRSF4Q08170 494 aaKnown RBP7.62□□□□□ -1.19
USF3-201ENST00000316407 OR4D11Q8NGI4 311 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 NT5CQ8TCD5 201 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 FAM74A4Q5TZK3 123 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 SLC52A3Q9NQ40 469 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 A0A1B0GU03 582 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 PPP1R17O96001 155 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 OR2V1Q8NHB1 315 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 TEX29Q8N6K0 151 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 IP6K3Q96PC2 410 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 VDAC1P21796 283 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 FAM53AQ6NSI3 398 aaPredicted RBP7.62□□□□□ -1.19
USF3-201ENST00000316407 PHOSPHO2Q8TCD6 241 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 HDGFL3Q9Y3E1 203 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 DHHO43323 396 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 RAMP1O60894 148 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 F11P03951 625 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 FTH1P19P0C7X4 201 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 MYOGP15173 224 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 SLC36A1Q7Z2H8 476 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 HIGD1AQ9Y241 93 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 SCAND1P57086 179 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 ECSCRQ19T08 205 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 WNK1Q9H4A3 2382 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 UBE2L6O14933 153 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 UCP3P55916 312 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 HIST1H1AQ02539 215 aaPredicted RBP7.62□□□□□ -1.19
USF3-201ENST00000316407 VN1R2Q8NFZ6 395 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 MMDQ15546 238 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 MRPL43Q8N983 215 aaKnown RBP7.62□□□□□ -1.19
USF3-201ENST00000316407 FOXB1Q99853 325 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 ZPLD1Q8TCW7 415 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 TMEM70Q9BUB7 260 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 SLC26A1Q9H2B4 701 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 TUBD1Q9UJT1 453 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 C7orf66A4D0T2 115 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 SSTR5P35346 364 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 MRAP2Q96G30 205 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 ZNF414Q96IQ9 312 aa7.62□□□□□ -1.19
USF3-201ENST00000316407 FGF5P12034 268 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 CBLN3Q6UW01 205 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 MORN4Q8NDC4 146 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 ZIC3O60481 467 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 EML2O95834 649 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 IGHEP01854 428 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 TM4SF19Q96DZ7 209 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 PMCHL2Q9BQD1 86 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 PHLDA3Q9Y5J5 127 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 A8MWL6 223 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 KLHDC2Q9Y2U9 406 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 WIPI1Q5MNZ9 446 aaPredicted RBP7.61□□□□□ -1.19
USF3-201ENST00000316407 TMEM174Q8WUU8 243 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 TNFRSF14Q92956 283 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 OR2V2Q96R30 315 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 IL2RAP01589 272 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 IRF3Q14653 427 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 VKORC1L1Q8N0U8 176 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 SLC17A3O00476 420 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 NDUFA3O95167 84 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 TMEM50AO95807 157 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 IGHV3-48P01763 117 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 C1QCP02747 245 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 LOXL3P58215 753 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 NANOS3P60323 173 aaKnown RBP7.61□□□□□ -1.19
USF3-201ENST00000316407 ABHD14BQ96IU4 210 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 UBE2ZQ9H832 354 aaPredicted RBP7.61□□□□□ -1.19
USF3-201ENST00000316407 PGPEP1Q9NXJ5 209 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 FCARP24071 287 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 ASB5Q8WWX0 329 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 LGALS7P47929 136 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 FBLN7Q53RD9 439 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 C19orf54Q5BKX5 351 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 MMD2Q8IY49 270 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 STAG3L3P0CL85 134 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 OR5AN1Q8NGI8 311 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 CDIPTO14735 213 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 VSIG8P0DPA2 414 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 DSCR4P56555 118 aaPredicted RBP7.61□□□□□ -1.19
USF3-201ENST00000316407 SNAI3Q3KNW1 292 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 CD300LDQ6UXZ3 194 aa7.61□□□□□ -1.19
USF3-201ENST00000316407 NAA38Q9BRA0 125 aaKnown RBP7.61□□□□□ -1.19
USF3-201ENST00000316407 C11orf68Q9H3H3 251 aaKnown RBP7.61□□□□□ -1.19
USF3-201ENST00000316407 MT-ND6P03923 174 aa7.6□□□□□ -1.19
USF3-201ENST00000316407 COL22A1Q8NFW1 1626 aaPredicted RBP7.6□□□□□ -1.19
USF3-201ENST00000316407 CTSVO60911 334 aa7.6□□□□□ -1.19
USF3-201ENST00000316407 REG1AP05451 166 aa7.6□□□□□ -1.19
USF3-201ENST00000316407 COL10A1Q03692 680 aa7.6□□□□□ -1.19
USF3-201ENST00000316407 GFI1BQ5VTD9 330 aa7.6□□□□□ -1.19
USF3-201ENST00000316407 HARBI1Q96MB7 349 aa7.6□□□□□ -1.19
USF3-201ENST00000316407 MAP1LC3AQ9H492 121 aa7.6□□□□□ -1.19
USF3-201ENST00000316407 SLC25A10Q9UBX3 287 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms