RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 FDCSPQ8NFU4 85 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 CACNA1BQ00975 2339 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 ZNF324O75467 553 aaPredicted RBP7.09□□□□□ -1.27
VPS41-202ENST00000310301 PRF1P14222 555 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 MRPS11P82912 194 aaKnown RBP7.09□□□□□ -1.27
VPS41-202ENST00000310301 MGAT2Q10469 447 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 AMMECR1LQ6DCA0 310 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 ERASQ7Z444 233 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 TUSC5Q8IXB3 177 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 TMEM183AQ8IXX5 376 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 ST6GALNAC3Q8NDV1 305 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 HDHD3Q9BSH5 251 aaPredicted RBP7.09□□□□□ -1.27
VPS41-202ENST00000310301 ZNF665Q9H7R5 613 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 KCNK7Q9Y2U2 307 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 HLA-DQA1P01909 254 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 C1QAP02745 245 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 CTSSP25774 331 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 MEF2BQ02080 365 aaPredicted RBP7.09□□□□□ -1.27
VPS41-202ENST00000310301 RAB1CQ92928 201 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 TTTY12Q9BZ98 90 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 DNAJC4Q9NNZ3 241 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 ASCL3Q9NQ33 180 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 THYN1Q9P016 225 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 AHCTF1Q8WYP5 2266 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 TANC1Q9C0D5 1861 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 SMIM13P0DJ93 91 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 GLIPR1P48060 266 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 RBPMS2Q6ZRY4 209 aaKnown RBP7.09□□□□□ -1.27
VPS41-202ENST00000310301 OR10D3Q8NH80 312 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 MBD3L1Q8WWY6 194 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 GMPPAQ96IJ6 420 aaPredicted RBP7.09□□□□□ -1.27
VPS41-202ENST00000310301 SIRT4Q9Y6E7 314 aaPredicted RBP7.09□□□□□ -1.27
VPS41-202ENST00000310301 SLC25A17O43808 307 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 HLA-DRB1P01911 266 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 SRIP30626 198 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 SAMD13Q5VXD3 122 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 CLEC2AQ6UVW9 174 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 OR13G1Q8NGZ3 307 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 LSM10Q969L4 123 aaKnown RBP7.09□□□□□ -1.27
VPS41-202ENST00000310301 PAXXQ9BUH6 204 aa7.09□□□□□ -1.27
VPS41-202ENST00000310301 A8MWL6 223 aa7.09□□□□□ -1.28
VPS41-202ENST00000310301 LDLRAD4O15165 306 aa7.09□□□□□ -1.28
VPS41-202ENST00000310301 RND3P61587 244 aa7.09□□□□□ -1.28
VPS41-202ENST00000310301 CBLN3Q6UW01 205 aa7.09□□□□□ -1.28
VPS41-202ENST00000310301 PRSS41Q7RTY9 318 aa7.09□□□□□ -1.28
VPS41-202ENST00000310301 NIT1Q86X76 327 aa7.09□□□□□ -1.28
VPS41-202ENST00000310301 PTX4Q96A99 478 aa7.09□□□□□ -1.28
VPS41-202ENST00000310301 PMCHL2Q9BQD1 86 aa7.09□□□□□ -1.28
VPS41-202ENST00000310301 ALKBH7Q9BT30 221 aaPredicted RBP7.09□□□□□ -1.28
VPS41-202ENST00000310301 FLRT3Q9NZU0 649 aa7.09□□□□□ -1.28
VPS41-202ENST00000310301 IL36RNQ9UBH0 155 aa7.09□□□□□ -1.28
VPS41-202ENST00000310301 C9orf172C9J069 976 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 C3orf80F5H4A9 247 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 AGAP20933 346 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 SPANXN1Q5VSR9 72 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 BHLHA15Q7RTS1 189 aaPredicted RBP7.08□□□□□ -1.28
VPS41-202ENST00000310301 C10orf111Q8N326 155 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 FAM169BQ8N8A8 192 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 RASL11BQ9BPW5 248 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 TMEM208Q9BTX3 173 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 hADV38S2A0JD32 116 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 K7ENP7 123 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 CT62P0C5K7 136 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 HOXA4Q00056 320 aaPredicted RBP7.08□□□□□ -1.28
VPS41-202ENST00000310301 KIAA1644Q3SXP7 199 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 INO80CQ6PI98 192 aaPredicted RBP7.08□□□□□ -1.28
VPS41-202ENST00000310301 PPP1R32Q7Z5V6 425 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 C10orf126Q8N4M7 172 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 VSTM2AQ8TAG5 236 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 P2RX4Q99571 388 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 ZDHHC8Q9ULC8 765 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 SPTBN2O15020 2390 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 GNG7O60262 68 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 COX7A1P24310 79 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 PRRX1P54821 245 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 RAC3P60763 192 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 TMEM252Q8N6L7 170 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 STXBP6Q8NFX7 210 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 SFXN3Q9BWM7 321 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 CXXC4Q9H2H0 198 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 MRPS18AQ9NVS2 196 aaKnown RBP7.08□□□□□ -1.28
VPS41-202ENST00000310301 CISD1Q9NZ45 108 aaKnown RBP7.08□□□□□ -1.28
VPS41-202ENST00000310301 PXMP4Q9Y6I8 212 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 NINQ8N4C6 2090 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 A1L4Q6 167 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 C1QTNF9BB2RNN3 333 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 FOXS1O43638 330 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 HLA-DQB1P01920 261 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 C1QTNF9P0C862 333 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 PPP1CCP36873 323 aaKnown RBP7.08□□□□□ -1.28
VPS41-202ENST00000310301 KLF3P57682 345 aaPredicted RBP7.08□□□□□ -1.28
VPS41-202ENST00000310301 FXYD3Q14802 87 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 Q5BKY6 102 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 PIP4P1Q86T03 277 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 PGLYRP4Q96LB8 373 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 SH3BGRL3Q9H299 93 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 KCNE5Q9UJ90 142 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 FAM222BQ8WU58 562 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 FAM216AQ8WUB2 273 aa7.08□□□□□ -1.28
VPS41-202ENST00000310301 A0A1W2PQD3 144 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms